Nomascus leucogenys (northern white-cheeked gibbon): 100584285
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Entry
100584285 CDS
T03265
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle04151
PI3K-Akt signaling pathway
nle04510
Focal adhesion
nle04512
ECM-receptor interaction
nle04820
Cytoskeleton in muscle cells
nle04926
Relaxin signaling pathway
nle04933
AGE-RAGE signaling pathway in diabetic complications
nle04974
Protein digestion and absorption
nle05146
Amoebiasis
nle05165
Human papillomavirus infection
nle05200
Pathways in cancer
nle05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100584285 (COL4A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100584285 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100584285 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100584285 (COL4A2)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
100584285 (COL4A2)
09154 Digestive system
04974 Protein digestion and absorption
100584285 (COL4A2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100584285 (COL4A2)
09162 Cancer: specific types
05222 Small cell lung cancer
100584285 (COL4A2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100584285 (COL4A2)
09174 Infectious disease: parasitic
05146 Amoebiasis
100584285 (COL4A2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
100584285 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nle04147
]
100584285 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
nle00536
]
100584285 (COL4A2)
Exosome [BR:
nle04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
100584285 (COL4A2)
Glycosaminoglycan binding proteins [BR:
nle00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100584285 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
100584285
NCBI-ProteinID:
XP_030669542
Ensembl:
ENSNLEG00000007932
LinkDB
All DBs
Position
5:136586895..136792229
Genome browser
AA seq
1711 aa
AA seq
DB search
MGRDLRAAGPALRRWLLLGTVTVGFLAQSVLAGVKKFDVPCGGRDCSGGCQCYPEKGGRG
QPGPVGPQGYNGPPGLQGFPGLQGRKGDKGERGAPGITGPKGDVGARGVSGFPGADGIPG
HPGQGGPRGRPGYDGCNGTQGDSGPQGPPGSEGFTGPPGPQGPKGQKGEPYALPKEERDR
YRGEPGEPGLVGFQGPPGRPGHVGQMGPVGAPGRPGPPGPPGPKGQQGNRGLGFYGVKGE
KGDVGQPGPNGIPSDTLHPIIAPTGVTFHPDQYKGEKGSEGEPGVRGISLKGEEGIMGFP
GPRGYPGLSGEKGSPGQKGSRGLDGYQGPDGPRGPKGEAGDPGPPGLPAYSPHPSLAKGA
RGDPGFPGAQGEPGSQGEPGDPGLPGPPGLSIGDGDQRRGLPGEMGPKGFIGEPGIPALY
GGPPGPDGKRGPPGPPGLPGPPGPDGFLFGLKGAEGRAGFPGLPGSPGARGPKGWKGDGG
DCRCAEGDEAITGLPGLPGPKGFAGINGEPGRKGDKGDPGQHGLPGFPGLKGVPGNVGAP
GPKGAKGDSRTITTKGERGQPGVPGVPGMKGDDGSPGRDGLDGFPGLPGPPGDGIKGPPG
DPGYPGIPGTKGTPGERGPPGLGLPGLKGQRGFPGDAGLPGPPGFLGPPGPAGTPGQIDC
DTDVKIAIGGDRQETIQPGCVGGPKGLPGLPGPPGPTGAKGLRGIPGFSGADGGPGPKGL
PGDPGREGFPGPPGFIGPRGSKGAVGLPGPDGSPGPIGLPGPDGPPGERGLPGEVLGAQP
GPRGDAGVPGQPGLKGLPGDRGPPGFRGSQGMPGMPGLKGQPGLPGPSGQPGPYGPPGLH
GFPGAPGQEGPLGLPGIPGFEGLPGDRGDPGDTGAPGPVGMKGLSGDRGDAGLAGERGHP
GSPGFKGIDGMPGTPGLKGDRGSPGMDGFQGMPGLKGRPGFPGSKGEAGFFGIPGLKGLA
GEPGFKGSRGDPGPPGPPPVILPGMKDIKGEKGDEGPMGLKGYLGAKGIQGMPGIPGLSG
IPGLPGRPGHIKGVKGDIGAPGIPGLPGFPGVAGPPGITGFPGFIGSRGEKGAPGRAGLY
GEIGPTGDFGDIGDTINLPGRPGLKGERGTTGIPGLKGFFGEKGTEGDIGFPGITGVTGV
QGPPGLKGQTGFPGLTGPPGSQGEPGRIGLPGGKGDDGWPGAPGLPGFPGLRGIRGLHGL
PGTKGFPGSPGSDIHGDPGFPGPPGERGDPGEANTLPGPVGVPGQKGDQGAPGERGPPGS
PGLQGFPGITPPSNISGAPGDKGAPGIFGLKGYRGPPGPPGSAALPGSKGDTGNPGAPGT
PGTKGWAGDSGPQGRPGVFGLPGEKGPRGEQGFMGNTGPTGAVGDRGPKGPKGDPGFPGA
PGTVGAPGIAGIPQKIAVQPGTVGPQGRRGPPGAPGEMGPQGPPGEPGFRGAPGKAGPQG
RGGVSAVPGFRGDEGPIGHQGPIGQEGAPGRPGSPGLPGMPGRSVSIGYLLVKHSQTDQE
PMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCYYASRN
DKSYWLSTTAPLPMMPVAEDEIKPYISRCSVCEAPAVAIAVHSQDVSIPHCPAGWRSLWI
GYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGGRGTCHYYANKYSFWLTTIPE
QSFQGSPSADTLKAGLIRTHISRCQVCMKNL
NT seq
5136 nt
NT seq
+upstream
nt +downstream
nt
atggggagagacctgcgcgcggccggccctgccctacggcggtggctgctgctggggaca
gtgaccgtggggttcctcgcccagagcgtcttggcgggtgtgaagaagtttgatgtgccg
tgcggaggaagagactgcagtgggggctgccagtgctaccctgagaaaggtggacgtggt
cagcctgggccagtgggcccccaggggtacaacgggccaccaggattacaaggattcccg
ggactgcagggacgcaaaggagacaagggtgaacggggagcccccggaataacaggaccc
aagggcgacgtgggagcaagaggcgtttctggattccctggtgccgatggaattcctgga
cacccggggcaaggtgggcccaggggaaggcccggctatgatggctgcaacggaacccag
ggcgactcaggtccacaggggccccccggctctgaggggttcaccgggcctcccgggccc
caaggaccaaaagggcagaaaggtgagccttatgcactgcctaaagaggagcgtgacaga
tatcggggtgaacctggagaacctggattggtcggtttccagggacctcccggccgccct
gggcatgtgggacagatgggtccagttggagctccagggagaccaggaccacccggaccc
cctggaccaaaaggacagcaaggcaacagaggacttggtttctacggagttaagggtgaa
aagggtgacgtagggcagccgggacccaacgggattccatcagacaccctccaccccatc
atcgcgcccacgggagtcaccttccacccagatcagtacaagggtgaaaaaggcagtgag
ggggaaccaggagtaagaggcatttccttgaagggagaagaaggaatcatgggctttcct
ggaccgaggggttaccctggcttgagtggtgaaaaaggatcaccaggacagaagggaagc
cgaggcctggatggctatcaaggccctgatggaccccggggacccaagggagaagccgga
gacccagggcctcctggactacctgcctactcccctcacccttccctagcaaaaggtgcg
agaggtgacccaggattcccaggggcccaaggggagccaggaagccagggtgagccagga
gacccgggcctcccaggcccccctggcctctccatcggagatggagatcagaggagaggc
ctgccgggtgagatgggacccaagggcttcatcggagagcccggcatccctgcgctctac
gggggcccacctggacctgatggaaagcgagggcctccaggaccccccgggctccctgga
ccacctggacctgatggcttcctgtttgggctgaaaggagcagaaggaagagcgggcttc
cctgggcttcccggctcccctggagcccgcggaccaaagggatggaaaggtgatggtggg
gactgcagatgtgcagaaggcgacgaagctatcacaggtcttccgggactgccaggaccc
aagggcttcgcaggcatcaacggggagccggggaggaaaggggacaaaggagaccccggc
caacacggcctccctgggttcccagggctcaagggagtgcctggcaacgttggtgctccc
ggacccaaaggagcaaaaggagattccagaacaatcacgaccaaaggtgagcggggacag
cccggcgtcccaggtgtgcccgggatgaaaggtgacgatggcagcccaggccgcgatggg
ctcgatggattccccggcctcccaggccctcccggcgatggcatcaagggccctccaggg
gacccaggctatccaggaatacctggaacgaagggtactccaggagaaaggggcccccca
ggactgggccttcccggcctcaaaggccaacgtggtttccctggagacgccggcttacct
ggaccaccaggcttcctgggccctcctggccccgcaggaaccccaggacaaatagattgt
gacacagatgtgaaaattgccattggaggtgacagacaggagaccatccagccaggttgc
gtaggagggcccaagggattgccaggcctgccaggacccccaggccccacaggtgccaaa
ggcctccgaggaatcccaggcttctcaggagctgatggaggaccagggcccaagggcttg
ccaggagacccaggtcgtgaagggttcccaggacccccagggttcataggaccccgagga
tccaaaggtgcagtgggtctccctggcccagatggatccccaggtcccatcggcctgcca
gggccagatgggccccctggggaaaggggccttcctggagaagtcctgggagcccagccc
gggccacgaggagatgctggtgtgcctggacagcctgggcttaaaggccttcccggagac
agaggcccccctggattcagaggaagccaggggatgcctgggatgccagggctgaagggc
cagccaggcctcccaggaccttccggccagccaggcccgtacgggcctccaggactgcat
ggattcccaggagctcctggccaagaggggcccttggggctgccaggaatcccaggcttt
gaaggtctgcctggtgatagaggggaccctggggacacaggcgctcctggccctgtgggc
atgaaaggtctctctggtgacagaggagatgctggcttggccggggagcgaggccatcca
ggaagccctggatttaaaggaattgatgggatgcctgggacccccgggctaaaaggagat
agaggctcacctgggatggatggtttccaaggcatgcctggactcaaagggagacctggg
tttccagggagcaaaggcgaggctggatttttcggaatacccggtctgaagggtctggct
ggtgagccaggttttaaaggcagccgaggggaccctgggcccccaggaccacctcctgtc
atcctgccgggaatgaaagacattaaaggagagaaaggagacgaagggcctatggggctg
aaaggatacctgggcgcaaaaggtatccaaggaatgccaggcatcccggggctgtcagga
atccctgggctgcctgggaggcccggccacatcaaaggagtcaagggagacatcggagcc
cccggcatccctggtttgccaggattccctggggtggctggcccccctggaattacagga
ttcccaggattcataggaagccggggtgagaaaggtgccccagggagagcaggcctgtat
ggcgagatcggcccgactggtgattttggtgacatcggggacactataaatttaccagga
agaccaggcctgaagggggagcggggcaccactggaataccaggtctgaagggattcttt
ggagagaagggaacagaaggtgacatcggcttccctgggataacaggcgtgactggagtc
caaggccctcctggacttaaaggacaaacaggctttccagggctgactgggcctccaggg
tcgcagggagagccggggcggattggactgcctggtggcaaaggagacgatggctggccg
ggagctccgggcttaccaggttttccaggactccgtgggatccgcggcttacacggcttg
ccaggcaccaaaggctttccaggatccccaggttctgacatccatggagacccaggcttc
ccaggccctcctggggaaagaggtgacccaggagaggccaacacccttccaggccctgtg
ggagtcccaggacagaaaggagaccaaggagctccaggggaacgaggcccacctgggagt
ccaggacttcaggggttccctggcatcacgcccccttccaacatctctggggcacctggg
gacaaaggggctccagggatatttggcctgaaaggttatcggggcccaccagggccacca
gggtctgctgctcttcctggaagcaaaggtgacacagggaacccaggagctccaggaacc
ccagggaccaaaggatgggccggggactccgggccccagggcaggcctggtgtgttcggt
ctcccgggagaaaaagggcccaggggcgaacaaggcttcatggggaacactggacccacc
ggggcagtgggcgacagaggccccaagggacccaagggagacccaggattccctggtgcc
cccgggactgtgggagcccccgggattgcaggaatcccccagaagattgccgtccaacca
gggacagtgggtccccaggggaggcgaggcccccctggggcaccgggggagatggggccc
cagggcccccccggagaaccaggtttccgtggggctccagggaaagctgggccccaagga
agaggtggtgtgtctgctgttcccgggttccggggagatgaaggacccataggccaccag
gggccaattggccaagaaggtgcaccaggccgtccagggagcccaggcctgccgggtatg
ccaggccgcagcgtcagcatcggctacctcctggtgaagcacagccagacggaccaggag
cccatgtgcccggtgggcatgaacaagctctggagtggatacagcctgctgtactttgag
ggccaggagaaggcgcacaaccaggacctggggctggcgggctcctgcctggcacggttc
agcaccatgcccttcctgtactgcaaccctggtgatgtctgctactatgccagccggaac
gacaagtcctactggctctctaccactgccccgctgcccatgatgcctgtggccgaagac
gagatcaagccctacatcagccgctgctctgtgtgtgaggccccagccgtcgccattgcg
gtccacagtcaggatgtctccatcccacactgcccagctgggtggcggagtttgtggatc
ggatattccttcctcatgcacacggcggcgggagacgaaggcggtggccagtcactggtg
tcaccaggcagctgtctagaggacttccgcgccacaccattcatcgagtgcaatggaggc
cgcggcacctgccactactacgccaacaagtacagcttctggctgaccaccattcccgag
cagagcttccagggctcgccctctgccgacacgctcaaggccggcctgatccgcacacac
atcagccgctgccaggtgtgcatgaagaacctgtga
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