Nomascus leucogenys (northern white-cheeked gibbon): 100584356
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Entry
100584356 CDS
T03265
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nle03000
]
100584356 (SOX1)
Transcription factors [BR:
nle03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100584356 (SOX1)
SSDB
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Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
100584356
NCBI-ProteinID:
XP_030669570
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Position
5:138306898..138310236
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AA seq
393 aa
AA seq
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MYSMMMETDLHSPGGAQAPTNLSGPAGAGGGGGGGGGGGGGGGGGAKANQDRVKRPMNAF
MVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDY
KYRPRRKTKTLLKKDKYSLAGGLLAAGAGGGGAAVAMGVGVGVGAAAVGQRLESPGGAAG
GGYAHVNGWANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGAGGAHPHAHPAHPHPHHPHA
HPHNPQPMHRYDMGALQYSPISNSQGYMSASPSGYGGLPYGAAAAAAAAAGGAHQNSAVA
AAAAAAAASSGALGALGSLVKSEPSGSPPAPAHSRAPCPGDLREMISMYLPAGEGGDPAA
AAAAAAQSRLHSLPQHYQGAGAGVNGTVPLTHI
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagaccgacctgcactcgcccggcggcgcccaggcccccacg
aacctctcgggccccgccggggcgggcggaggcgggggcggcggcggcggcggcggcggc
ggcggcggcgggggcgccaaggccaaccaggaccgggtcaagcggcccatgaacgccttc
atggtgtggtcccgcgggcagcggcgcaagatggcccaggagaaccccaagatgcacaac
tcggagatcagcaagcgcctgggggccgagtggaaggtcatgtccgaggccgagaagcgg
ccgttcatcgacgaggccaagcggctgcgcgcgctgcacatgaaggagcacccggattac
aagtaccggccgcgccgcaagaccaagacgctgctcaagaaggacaaatactcgctggcc
ggcgggctcctggcggccggcgcgggtggcggcggcgcggccgtggccatgggcgtgggc
gtgggcgtgggcgctgcggccgtgggccagcgcctggagagcccgggcggcgcggcgggc
ggcggctacgcgcacgtcaacggctgggctaacggcgcctaccccgggtcggtggcggcg
gcggcggcggccgcggccatgatgcaggaggcgcagctggcctacgggcagcacccgggc
gcgggcggcgcgcacccgcacgcgcaccccgcgcacccgcacccgcaccacccgcacgcg
cacccgcacaacccgcagcccatgcaccgctacgacatgggcgcgctgcagtacagcccc
atctccaactcgcagggctacatgagcgcgtcgccctcgggctacggcggcctcccctac
ggcgccgcggccgccgccgccgccgctgcgggcggcgcgcaccagaactcggccgtggcg
gcggcggcggcggcggcggccgcgtcgtcgggcgctctgggcgcgctgggctctctggtg
aagtcggagccgagcggcagccctcccgccccggcgcactcgcgggcgccgtgccccggg
gacctgcgcgagatgattagcatgtacttgcccgccggcgaggggggcgacccggcggcg
gcagcagcggccgcggcgcagagccggctgcactccctgccgcagcactaccagggcgcg
ggcgcgggcgtgaacggcacggtgcccctgacgcacatctag
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