Nomascus leucogenys (northern white-cheeked gibbon): 100585326
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Entry
100585326 CDS
T03265
Symbol
TRIM4
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM4 isoform X1
KO
K11998
tripartite motif-containing protein 4 [EC:
2.3.2.27
]
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nle04121
]
100585326 (TRIM4)
Enzymes [BR:
nle01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100585326 (TRIM4)
Ubiquitin system [BR:
nle04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100585326 (TRIM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
PRY
zf-C3HC4_3
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
zf-RING_6
TRAF3_RING
DUF5529
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
100585326
NCBI-ProteinID:
XP_030652469
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All DBs
Position
17:complement(34555562..34584875)
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AA seq
474 aa
AA seq
DB search
MEAEDLQEELTCAICLDYFQDPVSIECGHNFCRGCLHRSWAPGGGPFPCPECRHPSAPAA
LRPNWALARLTEKTRRRRLGPVPPGLCGLHWEPLRLFCEDDQRPVCLVCRESQEHRTHAM
APIDEAFDSYREKLLKSQRNLVAKMKKVMRLQDVEVKNATQWKDKIKSQRMRISTEFSKL
HNFLVEEEDLFLQRLNKEEEETKKKLNENTLKLNQTIASLKRLILEVGEKSQAPTLELLQ
NPKEVLTRSEIQDMNYSLEAVKVKTVCQIPLMKEMLKRFQVAVNLAEDTAHPKLVFSQEG
RYVKNTASASSWPVFSSAWNYFAGWRNPQKTAYAERFQHLPCVLGKNAFTSGKHYWEVES
RDSLEVAVGVCREDVMGITDCSKMSPDVGIWAIYWSAAGYWPLTGFPGTPTQQEPALHRV
GVYLDRGTENVSFYSAVDGVHLHTFSCSSVSRLRPFFWLSPLASLVILPVTDRK
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggaagctgaggacctccaggaggagttgacctgcgccatctgcctggactatttccag
gacccggtgtccatcgagtgcggccacaacttctgccgcggctgcctgcaccgcagctgg
gcgccgggcggcggcccgttcccttgccccgaatgtcggcacccatcggcgcccgccgcg
ctgcgacccaactgggccctggccaggctgacggagaagacgcggcgccggcgcctgggc
cccgtgcccccgggcctgtgcggcctccactgggagccgctgcggctcttctgcgaggac
gaccagcggcccgtgtgcctggtgtgcagggagtcccaggagcaccggactcacgccatg
gcacccatcgacgaggccttcgacagctaccgggagaaacttcttaagtctcagcgtaat
ctcgtggccaagatgaagaaagtcatgcgtttacaggacgtagaagtgaagaacgctaca
cagtggaaggataagataaagagtcagcgaatgagaatcagcacggagttttcaaagctg
cacaacttcctggttgaagaagaggacctgtttcttcagagattgaacaaagaagaagaa
gagacaaagaagaagctgaatgagaacacgttaaaactcaatcaaacgatcgcttcattg
aagaggctcatcttagaggtgggggagaagagccaggcccccaccctggagctgcttcag
aatccaaaagaagtgttgaccaggagtgagatccaggatatgaactattcccttgaagct
gtaaaggtgaagacagtgtgccagataccattgatgaaggaaatgctaaagcgattccaa
gtggctgtaaacctagctgaagacacagctcatcccaaactcgtcttctcccaggaaggg
agatacgtgaaaaatacagcatcagccagttcttggccagtgttttcttcagcatggaac
tactttgctggatggaggaatcctcagaagactgcttatgcagagagatttcagcactta
ccctgtgttctgggaaaaaacgctttcacctcagggaaacattactgggaagttgagagt
agagatagtctggaggttgccgttggggtgtgtcgggaggacgtcatgggaattactgat
tgttcaaaaatgtccccagatgtgggcatctgggcgatttattggagtgctgctggttat
tggcccttgacaggcttccctggaactcccacccagcaagagccagctctccaccgagtg
ggggtttacctggatcgtgggactgagaatgtctccttctacagcgctgtggatggagtg
cacctgcacaccttttcttgttcttctgtctcacgcctccggccatttttttggttgagt
ccattagcatctttagtcattctaccagtgactgataggaaatga
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