Nomascus leucogenys (northern white-cheeked gibbon): 100585378
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Entry
100585378 CDS
T03265
Symbol
PCDH1
Name
(RefSeq) protocadherin-1 isoform X1
KO
K16498
protocadherin delta 1
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
100585378 (PCDH1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nle01009
]
100585378 (PCDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nle04515
]
100585378 (PCDH1)
Protein phosphatases and associated proteins [BR:
nle01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100585378 (PCDH1)
Cell adhesion molecules [BR:
nle04515
]
Cadherins
Protocadherins
100585378 (PCDH1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
100585378
NCBI-ProteinID:
XP_030683196
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Position
2:36835023..36862724
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AA seq
1237 aa
AA seq
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MDSGAGGRRCPEAALLILGPARMGPLRHSPGPGGQRLLLPCMLLALLLLLAPSPGHATRV
VYKVPEEQPPNTLIGSLAADYGFPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDREGL
RECQNQLPGDPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPEN
TNIGSLFPIPLASDRDAGPNGVASYELQAGPEAQELFGLQVAEDQEEKQPQLIVMGNLDR
ERWDSYDLTIKVQDGGSPPRASSALLRVTVLDTNDNAPKFERPSYEAELSENSPIGHSVI
QVKANDSDQGANAEIEYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAK
DRGTNPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVS
DRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVD
SGNPPLSSTNSLKVQVVDVNDNAPVFTQTVTEVAFPENNKPGEVIAEITASDADSGSNAE
LVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRESYELKVVAADRGSPSLQGTATVLV
NVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENAQVQLSVEQDNGDFVI
QNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPYITAPSN
TSHRLLTPQTRLGETVSQVAAEDFDSGVNAELIYSIAGGNPYGLFQIGSHSGAITLEKEI
ERRHHGLHRLVVKVSDRGKPPRYGTALVHLYVNETLANRTLLETLLGHSLDTPLDIDIAG
DPEYERSKQRGNILFGVVAGVVAVALLIALAVLVRYCRQREAKSGYQAGKKETKDLYAPK
PSGKASKGNKSKGKKSKSPKPVKPVEDEDEAGLQKSLKFNLMSDAPGDSPRIHLPLNYPP
GSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPPANTFVGTGDTTSTGSEQYSDY
SYRTNPPKYPSKQLPHRRVTFSATSQAQELQDPSQHSYYDSGLEESETPSSKSSSGPRLG
PLALPEDHYERTTPDGSIGEMEHPENDLRPLPDVAMTGTCTRECSEFGHSDTCWMPGQSS
PSRRTKSSALKLSTFVPYQDRGGQEPAGAGSPSPPEDRNTKTAPVRLLPSYSAFSHSSHD
SCKDSATLEEIPLTQTSDFPPAATPASAQTAKREIYL
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggacagcggggcaggcggccggcgctgcccggaggcggccctcctgattctggggcct
gccaggatggggcccctgaggcacagcccaggccctggggggcaacggctactgctgccc
tgcatgctgctagcactgctgctcctgctggctccatccccaggccacgccactcgggta
gtgtacaaggtgccggaggaacagccacccaacacccttattgggagcctcgcagccgac
tatggttttccagatgtggggcacctgtacaagctggaggtgggtgccccataccttcgt
gtggatggcaagacaggtgacattttcaccaccgagacctccatcgaccgtgaggggctc
cgtgaatgccagaaccagctccctggtgatccctgcatcctggagtttgaggtgtctatc
acagacctcgtgcagaatggcagcccccggctgctagagggccagatagaggtacaagac
atcaatgacaacacacccaacttcgcctcaccagtcatcactctggccatccctgagaac
accaacatcggctcactcttccccatcccgctggcttcagaccgtgatgctggtcccaat
ggtgtggcatcctatgagctgcaggctgggcctgaggcccaggagctatttgggctgcag
gtggcagaggaccaggaggagaagcaaccacagctcattgtgatgggcaacctggaccgt
gagcgctgggactcctacgacctcaccatcaaggtgcaggatggcggcagccccccacgc
gccagcagtgccctgctgcgtgtcaccgtgctcgacaccaatgacaacgcccccaagttt
gagcggccctcctatgaggccgaactatctgagaatagccccataggccactcggtcatc
caggtgaaggccaatgactcagaccaaggtgccaatgcagagattgaatatacattccac
caggcgcctgaagttgtgaggcgtcttcttcgactggacaggaacactggacttatcact
gttcagggcccggtggaccgtgaggacctaagcaccctgcgcttctcagtgcttgctaag
gaccgaggcaccaaccccaagagtgcccgtgctcaggtggttgtgaccgtgaaggacatg
aatgacaatgcccccaccattgagatccggggcatagggctagtgactcatcaagatggg
atggctaacatctcagaggatgtggcagaggagacagctgtggccctggtgcaggtatct
gaccgagatgagggagagaatgcagctgtcacctgtgtggtggcaggtgatgtgcccttc
cagctgcgccaggccagtgagacaggcagtgacagcaagaagaagtatttcctgcagact
accacccccctggactacgagaaggtcaaagactacaccattgagattgtggctgtggac
tctggcaaccccccactctccagcaccaactccctcaaggtgcaggtggtggacgtcaat
gacaacgcacctgtcttcactcagactgtcactgaggtcgccttcccggaaaacaacaag
cctggtgaagtgattgctgagatcactgccagtgatgctgactctggctctaatgctgag
ctggtttactctctggagcctgagccggctgctaagggcctcttcaccatctcacccgag
actggagagatccaggtgaagacatccctggatcgggaacagcgggagagctatgagttg
aaggtggtggcagctgaccggggcagccctagcctccagggcacagccactgtccttgtc
aatgtgctggactgcaatgacaatgaccccaaattcatgctgagtggctacaacttctca
gtgatggagaacatgccagcgctgagtccagtgggcatggtgactgtcattgatggagac
aagggggagaatgcccaggtgcagctctcagtggagcaggacaacggtgactttgttatc
cagaatggcacaggcaccatcctatccagcctgagcttcgatcgagagcaacaaagcacc
tacaccttccagctgaaggcggtggatggtggcgtcccacctcgctcagcttatgttggt
gtcaccatcaatgtgctggacgagaatgacaacgcaccctatatcactgccccttctaac
acctctcaccggctgctgaccccccagacacgtcttggtgagacggtcagccaggtggca
gccgaggactttgactctggtgtcaatgctgagctgatctacagcattgcaggtggcaat
ccttacggactcttccagattgggtcacattcaggtgccatcaccctggagaaggagatt
gagcggcgccaccatgggctacaccgcctggtggtaaaggtcagtgaccgcggcaagccc
ccacgctatggcacagccttggtccatctttatgtcaatgagactctggccaaccgcacg
ctgctggagaccctcctgggccacagcctggacacgccgctggatattgacattgctggg
gatccagaatatgagcgctccaagcagcgtggcaacattctctttggtgtggtggccggt
gtggtggccgtggccttgctcatcgccctggcggttcttgtgcgctactgccgacagcgg
gaagccaaaagtggttaccaggctggtaagaaggagaccaaggacctgtatgctcccaag
cccagtggcaaggcctccaagggaaacaaaagcaagggcaagaagagcaagtccccaaag
cccgtgaagccagtggaggacgaggatgaggctgggctgcagaagtccctcaagttcaac
ctgatgagcgatgcccctggggacagtccccgcatccacctgcccctcaactacccacca
ggcagccctgacctgggccgccactaccgctctaactccccactgccttccatccagctg
cagccccagtcaccctcggcctccaagaagcaccaggtggtacaggacctgccacctgca
aacacattcgtgggcaccggggacaccacgtccacgggctctgagcagtactccgactac
agctaccgcaccaacccccccaaataccccagcaagcagttacctcaccgccgcgtcacc
ttctcggccaccagccaggcccaggagctgcaggacccatcccagcacagttactatgac
agtggcctggaggagtctgagacgccatccagcaagtcatcctcagggcctcgactcggt
cccctggccctgcctgaggatcactatgagcgcaccacccctgacggcagcataggagag
atggagcaccccgagaatgaccttcgccctttgcctgatgtcgccatgacaggcacatgt
acccgggagtgcagtgagtttggccactctgacacatgctggatgcctggccagtcatct
cccagccgccggaccaagagcagcgccctcaaactctccaccttcgtgccttaccaggac
cgaggagggcaggagcctgcgggcgccggcagccccagccccccggaagaccggaacacc
aaaacggcccccgtgcgcctcctgccctcctacagtgccttctcccacagtagccatgat
tcctgcaaggactcggccaccttggaggaaatccccctgacccagacctcggacttccca
cccgcagccacaccggcatctgcccagacggccaagcgcgagatctacctgtga
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