Nomascus leucogenys (northern white-cheeked gibbon): 100585556
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Entry
100585556 CDS
T03265
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle03030
DNA replication
nle03420
Nucleotide excision repair
nle03430
Mismatch repair
nle03440
Homologous recombination
nle03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100585556 (RPA1)
03420 Nucleotide excision repair
100585556 (RPA1)
03430 Mismatch repair
100585556 (RPA1)
03440 Homologous recombination
100585556 (RPA1)
03460 Fanconi anemia pathway
100585556 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nle03000
]
100585556 (RPA1)
03032 DNA replication proteins [BR:
nle03032
]
100585556 (RPA1)
03400 DNA repair and recombination proteins [BR:
nle03400
]
100585556 (RPA1)
Transcription factors [BR:
nle03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100585556 (RPA1)
DNA replication proteins [BR:
nle03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
100585556 (RPA1)
DNA repair and recombination proteins [BR:
nle03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
100585556 (RPA1)
MMR (mismatch excision repair)
100585556 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
100585556 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
Motif
Other DBs
NCBI-GeneID:
100585556
NCBI-ProteinID:
XP_003277864
Ensembl:
ENSNLEG00000017149
UniProt:
G1S5P9
LinkDB
All DBs
Position
19:complement(75584912..75649032)
Genome browser
AA seq
616 aa
AA seq
DB search
MVGQLSEGAIAAIMQKGDTNIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNLLVEQEQLSSNCVCQINRYIVNTLKDGRRVVILMELEVLKSAEAVGVKIGNPVPYNE
GLGQPQVAPPAPAASPAASSRPQPQNGSSGAGPTVSKAYGASKTFGKAAGPSLSHTSAGT
QSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESGEIRATAFNE
QVDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDDHHLPTVQF
DFTGIDDLENKSKDSLVDIIGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVVTATL
WGEDADKFDGSRQPVLAIKGARVSDFGGRSLSVLSSSTIIVNPDIPEAYKLRGWFDAEGQ
ALDGVSISDLKSGGVGGANTNWKTLYEVKSENLGQGDKPDYFSSVATVVYLRKENCMYQA
CPTQDCNKKVIDQQNGLYRCEKCDTEFPSFKYRMILSVNIADFQENQWVTCFQESAEAIL
GQNAAYLGELKDKNEQAFEEVFQNANFRSFIFRVRVKVETYNDESRIKATVMDVKPVDYR
EYGRRLVMSIRRSALM
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtcggccaactgagcgagggggccattgcggccatcatgcagaagggggatacaaac
ataaagcccatcctccaagtcatcaacatccgtcccattactacggggaatagtccaccg
cgttatcgactgctcatgagtgatggattgaacactctatcctctttcatgttggcaaca
cagttgaaccttcttgtggagcaagaacaattgtccagcaactgtgtttgccagattaac
agatacattgtgaacactctgaaagacggaaggagagtagttatcttgatggaattagaa
gttttgaagtcagctgaagcagttggagtgaagattggcaatccagtgccctataatgaa
ggactcgggcagccgcaagtagctcctccagcgccagcagccagcccggcagcaagcagc
aggccccagccacagaatggaagctcaggagcgggtcccactgtttctaaggcttatggt
gcttcaaagacatttggaaaagctgcaggtcccagcctgtcacacacttctgcgggaaca
cagtccaaagtggtgcccattgccagcctcactccttaccagtccaagtggaccatttgt
gctcgtgttaccaacaaaagtcagatccgtacctggagcaactcccgaggggaagggaag
cttttctctctagaactggttgatgaaagtggtgaaatcagagctacagctttcaacgag
caagtggacaagttctttcctcttattgaagtgaacaaggtgtattacttctcgaaaggc
accctgaagattgctaacaagcagttcacagctgttaaaaatgactacgagatgaccttc
aataacgagacttccgtcatgccctgtgaggacgaccatcatttacctacggttcagttt
gatttcacggggattgatgacctcgagaacaagtcgaaagactcacttgtagacatcatc
ggaatctgcaagagctatgaagatgccactaaaatcacagtgaggtccaacaacagagaa
gttgccaagaggaatatctacttgatggacacatccgggaaggtggtgactgctacactg
tggggggaagatgccgataaatttgatggttctagacagcccgtgctggctatcaaagga
gcccgagtctctgatttcggtggacggagcctctctgtgctgtcttcaagcactatcatt
gtgaatcctgacatcccagaggcctataagcttcgtggatggtttgacgcagaaggacaa
gccttagatggtgtttccatctctgatctaaagagcggcggagtcggaggggctaacacc
aactggaaaaccttgtatgaggtgaaatctgagaacctgggccaaggtgacaagccggac
tactttagttctgtggccacagtggtgtatcttcgcaaagagaactgcatgtaccaagcc
tgcccgactcaggactgcaataagaaagtgattgatcagcagaatgggctgtaccgctgt
gagaagtgcgacactgaattccccagtttcaagtaccgcatgatcctgtcagtaaatatt
gcagattttcaagagaatcagtgggtgacttgtttccaggagtctgctgaagctatcctt
ggacaaaatgctgcttatcttggggaattaaaagacaagaatgaacaggcatttgaagaa
gttttccagaatgccaacttccgatctttcatattcagagtcagggtcaaagtagagacc
tacaatgatgagtctcgaattaaggccaccgtgatggacgtgaagcccgtggactacaga
gagtatggccgaaggctggtcatgagcatcaggagaagtgcgttgatgtga
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