Nomascus leucogenys (northern white-cheeked gibbon): 100586437
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Entry
100586437 CDS
T03265
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100586437 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nle04131
]
100586437 (VPS8)
Membrane trafficking [BR:
nle04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
100586437 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
TPR_VPS8_2
TPR_Vps41
Beta-prop_WDR36-Utp21_1st
zf-RING_Vps41
zf_RING_Vps8_fungal
WD40_CDC20-Fz
zf-RING_11
zf-RING_2
zf-RING_5
zf-RING_UBOX
zf-C3H2C3
Clathrin
Beta-prop_WDR3_1st
Beta-prop_WDR5
zf-C3HC4
EIF3I
PHD
GED
Motif
Other DBs
NCBI-GeneID:
100586437
NCBI-ProteinID:
XP_030678799
Ensembl:
ENSNLEG00000006431
LinkDB
All DBs
Position
11:105958591..106195053
Genome browser
AA seq
1456 aa
AA seq
DB search
MENEPDHENVEQSLCAKMSEEELNKSFNLEASLSKFSYIDLDKELEFKNDLIDDKEFDIP
QVDTPPTLESILNETDDEDESFVLEDPTLLNIDTIDSHSYDTSSVASSDSGDRTNLKRKK
KLPDSFSLHGSVMRHSLLKGISAQIVSAAVESNSYLLEWEPPVEDYISMAFSEFNPYDKV
DAGLPTAIAVSSLIAVGTSHGLALIFGKDQNQALRLCLGSTSVGGQYGAISALSINNDCS
RLLCGFAKGQITMWDLASGKLLRSITDAHPPGTAILHIKFTDDPTLAICNDSGGSVFELT
FKRVMGVRTCESRCLFSGSKGEVCCIEPLHSKPELKDHPITQFSLLAMASLTKILVIGLK
PSLKVWMTFPYGRMDPSSVPLLAWHFVAVQNYVNPMLAFCRGDVVHFLLVKRDESGAIHV
TKQKHLHLYYDLINFTWINSRTVVLLDSVEKLHVIDRQTQEELETVEISEVQLVYNSSHF
KSLATGGNVSQALALVGEKACYQSISSYGGQIFYLGTKSVYVMMLRSWRERVDHLLKQDC
LTEALALAWSFHEGKAKAVVGLSGDASKRKAIVADRMVEILFHYADRALKKCPDQGKIQV
MEQHFQDMVPVIVDYCLLLQRKDLLFSQMYDKLSENSVAKGVFLECLEPYILSDKLVGIT
PQVMKDLIVHFQDKKLMENVEALIVHMDITSLDIQQVVLMCWENRLYDAMIYVYNRGMNE
FISPMEKLFRVIAPPLNAGKTLTDEQVVMGNKLLVYISCCLAGRAYPLGDIPEDLVPLVK
NQVFEFLIRLHSAEASPEEEIYPYIRTLLHFDTREFLNVLALTFEDFKNDKQAVEYQQRI
VDILLKVMVENSDFTPSQVGCLFTFLARQLAKPDNTLFVNRTLFDQVLEFLCSPDDDSRH
SERQQVLLELLQAGGIVQFEESRLIRMAEKAEFYQICEFMYEREHQYDKIIDCYLRDPLR
EEEVFNYIHNILSIPGHSAEEKQSVWQKAMDHIEELVSLKPCKAAELVATHFSGHIEMVI
KKLQNQVLLFKFLRSLLDPREGIHINQELLQISPCITEQFIELLCQFNPTQVIETLQVLE
CYRLEETIQITQKYQLHEVTAYLLEKKGDSHGAFLIMLERLQSKLQEITHQGENTKEDPS
LKDVEDTMVETIALCQRNSHNLNQQQREALWFPLLEAMMAPQKLSSSAIPHLHSEALKSL
TMQVLNSMAAFIALPSILQRILQDPVYGKGKLGEIQGLILGMLDTFNYEQTLLETTTSLL
NQDLHWSLCNLRASVTRGLNPKQDYCSICLQQYKRRQEMADEIIVFSCGHLYHSFCLQNK
ECTVEIEGQTRWTCYKCSSSNKVGKLSENSSEIKKGRITPSQVKMSPSYHQSKGDPTAKK
GTSEPVLDPQQIQAFDQLCRLYRGSSRLALLTELSQNRSSESYRPFSGSQSAPAFNSIFQ
NENFQLQLIPPPVTED
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgaaccagaccatgaaaatgtggaacagagcctctgtgccaagatgagcgaa
gaagagctgaataagtctttcaatctagaagcttcactttcaaaattctcttacatagat
ctggacaaggaactggagttcaaaaatgatctgattgatgacaaggagtttgatattcct
caagttgatactcctccaacactggaaagcatactaaatgagactgatgatgaagatgag
tcttttgttcttgaggatcctacgttgttaaacattgatactattgattctcactcctat
gatacttcatctgtggcaagctcagatagtggtgacaggaccaacttaaaaagaaagaag
aaattacctgattctttttcacttcatggatcagttatgcgccattcacttttgaaggga
atttctgcccagatagtgtctgcagctgtggagagtaactcatatttgctagaatgggaa
ccacctgttgaggattacatttccatggcgttttctgaatttaatccttatgacaaagta
gatgctggcttgcctacagcaattgcagtgtccagtctgatagcagtgggtacatctcat
ggattggctttaatatttggaaaagatcagaatcaagctttgcgactctgtctgggtagc
actagtgttggaggtcagtatggcgctatctctgccctcagtatcaacaatgattgctca
agacttctttgtggctttgctaaaggacagatcaccatgtgggatttggccagtggaaaa
cttctaagatcaataacagatgctcatcctccaggaacagcaatattgcatatcaagttt
acagatgatccaactcttgcaatttgcaacgacagcggaggctctgtttttgaattgacg
tttaagagagtgatgggagtgagaacctgtgaatctagatgtctgttcagtggttccaag
ggtgaagtctgctgtattgagcctctgcattctaagcctgagttgaaagatcatcccatc
acacagttttcattattggccatggcatccttaacaaaaatactggtcattggattgaaa
ccatccttgaaagtatggatgacttttccctacggccggatggatccttccagtgtgcca
ctgctggcctggcactttgtagcagtgcaaaattatgtgaatcccatgcttgccttctgc
agaggcgatgttgttcattttctattggtaaagagagatgaatctggagcaatacatgtt
actaagcaaaagcatcttcacctatactatgacctcatcaactttacttggataaattca
cgcacagttgtgctcttagacagcgtagagaagttgcatgtgattgatcggcaaacacaa
gaggaattggagacagtggagatctcagaagttcagctggtctacaatagcagccatttc
aaatcactagccactggaggaaatgttagtcaggcactggctttggttggagagaaggct
tgttatcaatccatcagtagctatggtggtcagatcttttatttggggacaaaatctgtt
tatgtgatgatgctgaggagctggagagagagagtggatcatctcctgaaacaagattgt
cttacagaagccttggctcttgcgtggtctttccatgaaggaaaagcaaaagcagtagtg
ggattatcaggggatgccagtaagcgaaaggctattgttgcagaccggatggtagaaatc
ctattccattatgcagatcgagctctgaaaaagtgcccagaccaaggaaaaatccaagtg
atggagcagcattttcaggatatggtgcctgtcatagttgattactgccttctgctgcag
cgaaaggatcttttatttagtcagatgtatgataaattaagtgagaattcagtggccaaa
ggagtatttttggagtgccttgagccatatattttaagtgataaattggtgggaatcaca
ccccaagtaatgaaagacttgattgttcatttccaagataaaaaattaatggaaaatgtg
gaagctctcattgtacatatggatatcaccagcctagatattcagcaggtagttctcatg
tgttgggaaaatcgtttatatgatgctatgatctatgtctacaacagaggcatgaatgaa
tttattagtccaatggagaaacttttcagagtcattgctcctcctctgaacgcaggaaaa
acactaacagatgaacaagttgttatgggcaataagcttcttgtatatattagctgttgt
ctagcaggtcgtgcctatccccttggtgacatccctgaagatcttgttcccttggttaaa
aaccaggtttttgaattcctaattcgcctgcattcagcagaggcttctcctgaggaagaa
atctatccttacattcggactttgctacattttgacacaagagaatttctaaatgtattg
gcactgacttttgaagattttaaaaatgacaagcaagctgtggaatatcaacagcgaatt
gtggatattttgttgaaagttatggtggagaattcagactttaccccctcacaagtagga
tgtctctttaccttccttgctcggcagcttgcaaagcctgacaacaccttgtttgtaaac
agaacactttttgatcaggtccttgaattcctttgtagtcctgatgatgactcccgacac
tctgaaagacagcaggtccttttagagttgctgcaggctggaggcatagttcaatttgaa
gagagtcgactcatccggatggcagaaaaagctgagttctatcaaatttgtgaatttatg
tatgaaagagaacaccaatatgacaaaattatcgattgctacttacgtgaccctctgaga
gaggaagaagtctttaattacattcacaatatcttatccattcctggacacagtgcagag
gagaaacagtctgtatggcagaaagcaatggatcatattgaggaacttgtgtccctgaag
ccctgtaaagctgcggagctggttgccacccacttttctggacatattgaaatggtcatt
aaaaaacttcagaaccaggttttgcttttcaaatttttgaggagtcttcttgacccaagg
gaaggtattcatataaatcaagaattactgcaaatatctccttgtatcacagagcagttc
attgagctgttgtgtcagttcaacccaacccaagttatagagactctgcaagtccttgag
tgctaccgtctggaagaaactattcagattactcagaagtatcaacttcatgaagtcact
gcttatctattggaaaagaaaggagatagtcatggtgccttcctaataatgttagagagg
ctacaaagcaaacttcaagagataacacatcaaggtgaaaataccaaagaggatccctca
ttgaaggatgttgaagataccatggtggagaccattgctctttgccagagaaattcacat
aatttgaaccagcagcaacgtgaggcactttggtttccgttattggaggcaatgatggcc
cctcagaagctgtccagttcagccattcctcatctacactctgaagctctgaaatctttg
accatgcaagttttaaatagcatggcagcttttattgcccttccatcaatcttgcaaaga
atcttacaggatccagtttatggaaaaggaaaacttggagaaatccagggacttatcttg
ggaatgttagatacctttaactatgaacaaaccctgctggaaacaacaactagccttcta
aaccaagatctccattggtcattgtgtaacctgagagcttcggtcaccagaggactgaat
cccaaacaagattactgctctatatgtttgcagcagtacaagagacgccaagaaatggct
gatgaaattattgtctttagctgtggccatttgtatcactcattctgcctacaaaacaaa
gaatgcactgtggaaattgagggccaaacaagatggacatgctacaaatgcagctcaagt
aacaaagtaggaaaactcagtgaaaattcatctgaaattaaaaagggaaggataacccca
tcacaggtaaaaatgtctccatcatatcatcagtccaaaggggatcccactgctaaaaaa
ggaacctcagaacctgttctggatccacagcaaatccaagcatttgatcagctttgccgt
ctctaccgaggaagctccaggctggctctcctcacggaactctcccagaatcgcagcagc
gagagctataggccattcagtggctcgcagagtgctcctgctttcaacagcatcttccag
aatgagaacttccagctgcagctcattcccccacctgtgactgaggattga
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integrated database retrieval system
