Nomascus leucogenys (northern white-cheeked gibbon): 100586506
Help
Entry
100586506 CDS
T03265
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle04140
Autophagy - animal
nle04148
Efferocytosis
nle05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100586506 (VPS18)
04148 Efferocytosis
100586506 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100586506 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nle04131
]
100586506 (VPS18)
Membrane trafficking [BR:
nle04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
100586506 (VPS18)
Hops complex
100586506 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_Vps41
zf-RING_5
zf-C3HC4_2
zf-RING_16
KNOX2
zf-ANAPC11
zf-RING_2
zf-RING_UBOX
zf_RING_Vps8
zf-rbx1
WD40_Prp19
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
100586506
NCBI-ProteinID:
XP_003266792
Ensembl:
ENSNLEG00000003368
LinkDB
All DBs
Position
6:complement(60512153..60522215)
Genome browser
AA seq
973 aa
AA seq
DB search
MASILDEYENSLSRSAVLQPGCPSVGIPHSGYVNAQLEKEVPIFTKQRIDFTPSERITSL
VVSSNQLCMSLGKDTLLRIDLGKANEPNHVELGRKDDAKVHKMFLDHTGSHLLIALSSTE
ILYVNRNGQKIRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGHIFEAELSASEGG
LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDGRSFVIATTRQRLFQFIGRAAEGAE
AQGFSGLFAAYTDHPPPFREFPSNLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGALDCG
RPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQMVLRDHFL
EKFGPLKHMVKDSSTGQLWAYTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPD
CLDTVLAREADFCFRQRRYLESARCYALTQSYFEEIALKFLEARQEEALAEFLQRKLASL
KPAERTQATLLTTWLTELYLSRLGALQGDPEALTLYRETKECFRTFLSSPRHKEWLFASR
ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSP
ILIRHIPRQLVDAWIEMGSRLDARQLIPALVNYSQGGEVQQVSQAIRYMEFCVNVLGETE
QAIHNYLLSLYARGRPDSLLAYLEQAGVSPHRVHYDLKYALRLCAEHGHHRACVHVYKVL
ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC
PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQEL
RGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQR
KLGAAPPPAKGSARAKEAEGGAATAGPSREQLKADLDELVAAECVYCGELMIRSIDRPFI
DPQRYEEEQLSWL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatcctggatgagtacgagaactcgctgtcccgctcggccgtcttgcagccc
ggctgccctagcgtgggcatcccccactcggggtatgtgaatgcccagctggagaaggaa
gtgcccatcttcacaaagcagcgcattgacttcaccccttccgagcgcatcaccagtctt
gttgtctccagcaatcagctctgcatgagcctgggcaaggatacactgctccgcattgac
ttgggcaaggcaaatgagcccaaccacgtggagctgggacgtaaggatgacgcaaaagtt
cacaagatgttccttgaccatactggctctcacctgctgattgccctgagcagcacggag
atcctctacgtgaaccgaaacggacagaagatacggccactagcacgctggaaggggcag
ctggtggagagtgtgggttggaacaaggcactgggcacggagagcagcacaggccccatc
ctggtcgggactgcccaaggccacatcttcgaagcagagctctcagccagcgaaggtggg
ctttttggccctgctccggatctctacttccgcccattgtacgtgctaaatgaagaaggg
ggtccagcacctgtgtgctcccttgaggccgagcggggccctgatgggcgtagctttgtt
attgccaccactcggcagcgcctcttccagttcataggccgagcagcagagggggctgag
gcccagggtttctcagggctctttgcggcttacacggaccacccacccccattccgtgag
tttcccagcaacctgggctacagtgagttggccttctacacccccaagctgcgctctgca
ccccgggccttcgcctggatgatgggggatggtgtgttgtatggggcattggactgtggg
cgccctgactctctgctgagcgaggagcgagtctgggagtacccagagggggtagggcct
ggggccagcccacccctagccatcgtcttgacccagttccacttcctgctgctgctggca
gaccgggtggaggcagtgtgcacactgaccgggcagatggtgctgcgggatcacttcctg
gagaaatttgggccgctgaagcacatggtgaaggactcctccacaggccagctgtgggcc
tacactgagcgggctgtcttccgctaccacgtgcaacgggaggcccgagatgtctggcgc
acctatctggacatgaaccgcttcgatctggccaaagagtattgtcgagagcggcccgac
tgcctggacactgtcctggcccgggaggccgatttctgctttcgccagcgtcgctacctg
gagagcgcacgctgctatgccctgacccagagctactttgaggagattgccctcaagttc
ctggaggcccgacaggaggaggctctggctgagttcctgcagcgaaaactggccagtttg
aagccagccgaacgtacccaggccacactgctgaccacctggctgacagagctctacctg
agccggcttggggctctgcagggggacccagaggccctgaccctctaccgagaaaccaag
gaatgctttcgaaccttcctcagcagcccccgccacaaagagtggctctttgccagccgg
gcctctatccatgagctgctcgccagtcatggggacacagagcacatggtgtactttgca
gtgatcatgcaggactatgagcgggtagtggcttaccactgtcagcacgaggcctacgag
gaggccctggccgtgctcgcccgccaccgtgacccccagctcttctacaagttctcaccc
atcctcatccgtcacatcccccgccagcttgtagatgcctggattgagatgggcagccgg
ctggatgctcggcagctcattcctgccctggtgaactacagccagggtggtgaggtccag
caggtgagccaggccatccgctacatggagttctgcgtgaacgtgctgggggagactgag
caggccatccacaactacctgctgtcgctgtatgcccgtggccggccggactcactgctg
gcctatctcgagcaggctggggtcagcccccaccgggtacattacgacctcaagtatgcg
ctgcggctctgcgccgagcatggccaccaccgcgcttgtgtccatgtctacaaggtccta
gagctgtatgaagaggccgtggacctggctctgcaggtggacgtggacctggccaagcag
tgtgcagacctgcctgaggaggatgaggaattgcgcaagaagctgtggctgaagatcgca
cggcacgtggtgcaggaggaggaagatgtacagacagccatggcttgcctggctagctgc
cccctgctcaagattgaggatgtgctgcccttctttcctgatttcgtcaccatcgaccac
ttcaaggaggcgatctgcagctcacttaaggcctacaaccaccacatccaggagctgcag
cgggagatggaagaggctacagccagtgcccagcgcatccggcgagacctgcaggagctg
cggggccgctacggcactgtggagccccaggacaaatgtgccacctgcgacttccccctg
ctcaaccgccctttttacctcttcctctgtggccatatgttccatgctgactgcctgctg
caggccgtgcgacctggcctgccagcctacaagcaggcccggctggaggagctgcagagg
aagctgggggctgctccacccccagccaagggctctgcccgggccaaggaggccgaaggt
ggggctgccacggcagggcccagccgggaacaactcaaggctgacctggatgagttggtg
gccgctgagtgtgtgtactgtggggagctgatgatccgctctattgaccggccattcatc
gacccccagcgctacgaggaggagcagctcagttggctgtag
DBGET
integrated database retrieval system
