Nomascus leucogenys (northern white-cheeked gibbon): 100586640
Help
Entry
100586640 CDS
T03265
Symbol
PNLDC1
Name
(RefSeq) poly(A)-specific ribonuclease PNLDC1 isoform X2
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100586640 (PNLDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nle03019
]
100586640 (PNLDC1)
Enzymes [BR:
nle01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
100586640 (PNLDC1)
Messenger RNA biogenesis [BR:
nle03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
100586640 (PNLDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
100586640
NCBI-ProteinID:
XP_003271811
Ensembl:
ENSNLEG00000011282
UniProt:
G1RKI3
LinkDB
All DBs
Position
3:145880133..145900774
Genome browser
AA seq
520 aa
AA seq
DB search
MFCTRRLVFFAFPAGLDMEFTGLRSNLSGPQQISLFDLPSEWYLKTRQSVQQFTICQIGL
SVFSAVEGEANKYIAHSCNFYLFPTTFGILDSEFSFQASSVQFLNQYGFNYNKFLKNGIP
YMNEEQEKKIRHDILTGNWRVRSTPDKDQIKVVIDEVTRWLDLAKEGDWMTLPGITGFQA
FEVQLVLRQALPNIWTVLKDEGVVVKKVSKQHRRYLQNTSCDRESCWKENILLSARGFSV
FFQMLVKAQKPLVGHNMMMDLLHLHEKFFRPLPESYDQFKQNIHRLFPVLIDTKSVTKDI
WKEMNFPRVSNLSEVYEVLNSDLNPTKTSGPEIVHASRCEKYVETKCPHEAAYDAFLCGS
VLLKVAHLLLQKIHRIDPVPELSFPQYLDVLAPYVNQVNLIRAGVPKINFSGPDYPSFRP
PILILSVKRWPGVSEQQVYHKFQNLCKFDVRRLTRSQFLLLTNKFKDTRNILKEYRGHPT
LCISLYHYWRHSPNVNCLLQVCGIVTAWALLAFILGRSGP
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgttctgcacccgaagactggtattttttgccttcccggcaggtctggacatggagttc
acgggccttcgttctaacctgtctgggccccagcaaatcagtctttttgatttgccatcg
gagtggtatctaaagacccgtcagagtgttcagcaatttacaatctgtcagattggattg
tctgtgttttctgctgttgaaggagaggcaaacaagtatatagcccattcgtgtaacttc
tatctcttccctacaacgtttgggattttggactcagaattctctttccaggcttccagt
gttcagtttttgaatcagtatggcttcaactataacaagtttctcaaaaacggaatccca
tatatgaatgaagaacaggagaagaaaattagacacgatatcctgactgggaactggaga
gttcgcagcactccggataaagaccaaatcaaggtggtgattgacgaagtgacgcggtgg
ctggacctggccaaggaaggcgactggatgactcttcctgggatcactggcttccaggcc
tttgaggtccaactggtgctgaggcaggccctgcccaacatctggacggtgctgaaagat
gagggggtggtagtgaagaaagtgagtaaacaacatcgtcggtatcttcagaacacctct
tgtgaccgagagagctgttggaaggaaaacattcttctctcagcaaggggtttttctgtc
tttttccaaatgctggtgaaagcccagaagcccttagtgggacataatatgatgatggac
ctgctgcacctccatgagaagttcttcagacccctcccagaaagctacgatcaatttaag
cagaatatccacaggctgtttcctgttctcattgataccaagagcgtaacaaaggatatc
tggaaggagatgaatttcccgagggtgtcgaatctttccgaagtctatgaagtcctgaac
agtgacttgaatcccaccaagacttctggaccagagattgttcacgcaagcaggtgtgag
aaatacgttgagacaaagtgcccccacgaagccgcgtatgatgccttcctctgtgggtca
gttcttttgaaagtggcacacttgcttctacagaagatacaccgcatcgaccctgtgccc
gagttgtcctttcctcagtaccttgatgtgctggctccttacgtgaaccaagtgaacctc
atccgagcgggggtcccgaagatcaatttttctggtccagattatcccagtttccgacct
cccatcctcatcctcagcgtcaaaaggtggcctggggtcagcgagcagcaagtctaccat
aagtttcagaatctctgcaagtttgatgtcaggcgactcacaagaagccagttcttactc
ctgaccaataagtttaaggacacgcggaacatcctgaaggagtaccggggccacccgacc
ctgtgcatctccctgtaccactactggagacactccccaaacgtcaactgcctgctccaa
gtctgtggcatagtgactgcctgggcccttctcgcgttcatcctcggaagatctggtccc
tga
DBGET
integrated database retrieval system
