Nomascus leucogenys (northern white-cheeked gibbon): 100586758
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Entry
100586758 CDS
T03265
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nle03009
]
100586758 (IGHMBP2)
03012 Translation factors [BR:
nle03012
]
100586758 (IGHMBP2)
Enzymes [BR:
nle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
100586758 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
100586758 (IGHMBP2)
Ribosome biogenesis [BR:
nle03009
]
Eukaryotic type
Other ribosome biogenesis factors
100586758 (IGHMBP2)
Translation factors [BR:
nle03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
100586758 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
zf-AN1
ResIII
Viral_helicase1
DEAD
nSTAND3
AAA_16
Helicase_RecD
AAA_22
SLFN-g3_helicase
UvrD-helicase
IstB_IS21
AAA_25
PhoH
DnaB_C
Flavi_DEAD
ABC_tran
Ada3
Zot
AAA
NPHP3_N
NTPase_1
UvrD_C_2
DAP3
VWA_2
ATPase
Motif
Other DBs
NCBI-GeneID:
100586758
NCBI-ProteinID:
XP_030667262
Ensembl:
ENSNLEG00000006609
LinkDB
All DBs
Position
4:88232439..88271939
Genome browser
AA seq
1075 aa
AA seq
DB search
MLWLHADASRPKVTVRGDAAMAAAIFPQPRPETETTRTACVTHGPGGEHRSRCNTGPAQK
REVAGSGLRSAVAMASAAVESFVTKQLDLLELERDAEVEERRSWQENICLKELQSRGVCL
LKLQVSSQRTGLYGRLLVTFEPRRCGSAAALPSNSFTSGDIVGLYDAASESSQLATGILT
RVTQKSVTVAFDESHDFQLSLDRENSYRLLKLANDVTYRRLKKALIALKKYHSGPASSLI
EVLFGRSAPSPASEIHPLTFFNTCLDTSQKEAVSFALSQKELAIIHGPPGTGKTTTVVEI
ILQAVKQGLKVLCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARS
DSAQIVADIRKDIDQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANV
VLATNTGASADGPLKLLPESHFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPT
TVSHKAALAGLSLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHPSV
AGHLLRDLPGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVD
AGVPARDIAVVSPYNLQVDLLRQSLVHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGE
VGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHGEVRTAFEYLDDIV
PENYSHESSQGSSHAATKAQGPAASTRTGSQQQEGGQEPAAPARQGRKKPAGKSLASEAP
SQPSLNGGSPEGVESQDGVDHFRAMIVEFMASKKMQLEFPPSLNSHDRLRVHQIAEEHGL
RHDSSGEGKRRFITVSKRAPLAPRPPAAPGPPAALGPPAGTGGLAPLQPVPPSPAQTEQP
PREQRGPDQPDLRTLHLERLQRVRSAQGQPTSKEQQSSGQQKLPEKKKKKAKGHPAIDLP
TEEDFEALVSAAIKADNTCGFAKCTASVTTLGQFCQLCSRRYCLSHHLPEIHGCGERARA
HARQRISREGVLYAGSGTKDRSLDPAKRAQLQRRLDKKLRELSNQRTSQRKERGT
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggctgcacgcggacgccagccgccctaaggtgaccgtcaggggagatgctgcc
atggccgccgccatcttcccgcagcctcggccggaaacggaaacgacgcgaaccgcgtgc
gtaacgcacgggcccggcggggaacaccggtcccgctgtaacaccggcccggcgcagaag
cgggaggtcgccggctcggggctcaggtcggcggtggcgatggcctcggcagctgtggag
agcttcgtgaccaagcagctggacctgctggagctcgagagagacgcggaggtggaggag
cgcaggtcctggcaggagaacatctgtctgaaagagctccagagccgaggcgtgtgtttg
ctgaagctgcaggtatccagccagcgcactgggctgtacggacggctgctggtcaccttt
gagcccaggcgatgcgggtccgcagcagctcttcccagtaacagctttacttctggtgat
atagtgggcctatacgatgctgctagtgagagcagtcagctggccaccgggatcctgacc
cgggtcacccagaagtcggtcacggtggcctttgatgagtcccatgatttccagttgagc
ttggaccgagagaattcctacagactgttaaaacttgccaatgatgtcacttacaggcga
ctgaaaaaagccctgattgctctaaagaagtatcattctggcccagcctcctcactcata
gaagtgctctttggcagatctgctcccagtcctgctagtgaaatacacccgctgacattc
ttcaacacctgcctggacacctcccagaaagaagcagtttcatttgcgctgtcgcagaaa
gaacttgccatcatccatggacctcctggcactgggaaaactacgactgtggttgagata
attcttcaagctgtgaaacaaggcttaaaggttctgtgctgcgccccctccaacatcgcc
gtggacaatctggtggagcgcctggctctgtgtaagcagcggattctgcgcctggggcac
cccgcccgcctcctggagtccattcagcagcactccctggatgcggttttagcgcggagc
gacagtgcccagattgttgcagatatcaggaaggacatcgaccaggtctttgtgaaaaac
aaaaagacccaggataagagagagaaaagtaattttcgaaatgaaattaagctattaaga
aaagaactgaaggagagggaagaagcagctatgctcgagagcctcacttcggcaaacgtg
gtccttgcaacaaacacaggtgcgtctgctgatggccccctgaagttgctgcctgagagc
cacttcgacgtggtggtcattgacgagtgtgcccaggccctcgaggcgagctgctggatc
cccctgctgaaggccagaaagtgcatcctggcgggcgatcacaagcagctgccccccacc
acagtctctcacaaggctgcgctggcagggctgtcgctcagcctgatggagcgcctggcc
gaggagtacggcgcgagggtggtgcggacactgacggtgcagtaccgcatgcaccaggct
atcatgcgctgggcctcggacaccatgtacctcgggcagctcacggcccacccttccgtg
gcggggcacctcctgagggacctcccaggtgtggctgccacagaagagacgggtgtgccc
ctgctcctggtggacaccgctggctgcgggctgtttgagctggaggaggaggacgaacaa
tcgaaagggaaccctggcgaagtccgcctcgtcagtttgcacatccaggctctggtggat
gctggtgttccagcccgtgacattgctgtggtctcgccatacaacctccaggtggacctg
ctcagacagagccttgtgcacaggcaccccgagcttgaaatcaagtccgtcgatggcttc
caaggccgagagaaggaggccgtgatactgtccttcgtcaggtccaacaggaaaggtgaa
gttggttttcttgctgaggaccggaggatcaatgtggctgtcactcgtgcccggcgccac
gtggcggtcatctgtgactcccgtactgtcaacaaccatgcatttttgaagaccctggtg
gagtatttcacacagcatggggaagtacgcacggcctttgagtatcttgacgatattgtc
ccagaaaactattcccatgagagctcccagggttccagccatgctgccaccaaggcccag
ggccctgctgcgtccaccaggactggaagccagcagcaggagggaggccaggagcccgca
gcacctgccagacagggccggaagaagccggccgggaagtctctggcctctgaagcccca
tctcagcccagcctcaacggaggcagcccggagggagtggagagccaagacggcgtggac
cacttccgggccatgatagtggagttcatggccagcaagaagatgcaattggagtttcct
ccttccctcaattcccacgacaggctgcgggtccaccagatagccgaggagcacgggctg
aggcacgacagttccggggaagggaagaggaggttcatcaccgtgagcaagagggccccg
ctggccccgcgacccccagcagccccgggacccccagcagccctgggacccccagcaggg
accggcggcctagcccctctccagccagtgccccctagtcctgcgcagacggagcagcct
cccagggagcagcgtggcccggaccagcctgatctgaggacgctgcacctggagagactg
cagagggtcaggagtgcgcaggggcagcccaccagcaaggagcagcagtcctcagggcag
cagaaacttccagaaaagaaaaagaaaaaagccaaaggacatccagccatagatctgccc
acggaggaggactttgaggccctggtttctgctgccattaaggctgataacacctgtggc
tttgccaagtgcacagccagcgtcacaaccctgggccagttctgccagctctgcagccgc
cgctactgcctcagccaccacctgcccgagatccatggctgcggtgagagggctcgcgcc
catgcccggcagagaatcagccgggaaggggtcctctatgccggcagcgggaccaaggac
agatccctggacccagccaagagggcccagctgcagaggaggctggataagaagctgagg
gagctcagcaaccagaggaccagccagaggaaggagagggggacgtga
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integrated database retrieval system
