KEGG T03265: 100587202

Nomascus leucogenys (northern white-cheeked gibbon): 100587202

Entry

100587202         CDS       T03265

Symbol

EXOSC1

Name

(RefSeq) exosome complex component CSL4 isoform X1

K07573

exosome complex component CSL4

Organism

nle Nomascus leucogenys (northern white-cheeked gibbon)

Pathway

nle03018

RNA degradation

Brite

KEGG Orthology (KO) [BR:nle00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100587202 (EXOSC1)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nle03019]
    100587202 (EXOSC1)
Messenger RNA biogenesis [BR:nle03019]
Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     100587202 (EXOSC1)
Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     100587202 (EXOSC1)

SSDB

Motif

Pfam:

EXOSC1 ECR1_N RRP4_S1 Nairovirus_NSm

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

LinkDB

Position

3:36184738..36194662

AA seq 211 aa
MRNRLRFHPGFGTAVIMAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLMKS
SENGALPVVSVVRETESQLLPDVGAIVTCKVSSINSRFAKVHILYVGSMPLKNSFRGTIR
KEDVRATEKDKVEIYKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGIQM
VPISWCEMQCPKTHTKEFRKVARVQPEFLQT

NT seq 636 nt +upstreamnt +downstreamnt
atgagaaatcgacttcgttttcatccgggtttcgggacagcggtaatcatggcgccaccc
gtgagatactgcatccccggcgaacgtctgtgtaacttggaggagggcagcccgggcagc
ggcacctacacccgccacggctacatcttttcgtcgcttgccggctgtctgatgaagagc
agcgagaatggcgcgcttccagtggtgtccgtagtgagagaaacagagtcccagttactg
ccagatgtgggagctattgtaacctgtaaggtctctagcatcaattcacgctttgccaaa
gtacacatcctgtatgtggggtccatgccacttaagaactcttttcgaggaactatccgc
aaggaagatgtccgagcaactgaaaaagacaaggttgaaatttataagagtttccgccca
ggtgacattgtcttggccaaagtgatctccttaggtgacgcacagtccaactacctgcta
accaccgccgagaacgagctgggagtggtggtagcccacagtgagtcaggtatccagatg
gttcccatcagctggtgtgagatgcagtgccctaagacccacactaaagaattccggaaa
gtagcccgagtacaacccgaattcttgcagacctaa

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