Nomascus leucogenys (northern white-cheeked gibbon): 100587255
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Entry
100587255 CDS
T03265
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain isoform X3
KO
K06237
collagen type IV alpha
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle04151
PI3K-Akt signaling pathway
nle04510
Focal adhesion
nle04512
ECM-receptor interaction
nle04820
Cytoskeleton in muscle cells
nle04926
Relaxin signaling pathway
nle04933
AGE-RAGE signaling pathway in diabetic complications
nle04974
Protein digestion and absorption
nle05146
Amoebiasis
nle05165
Human papillomavirus infection
nle05200
Pathways in cancer
nle05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100587255 (COL4A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100587255 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100587255 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100587255 (COL4A6)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
100587255 (COL4A6)
09154 Digestive system
04974 Protein digestion and absorption
100587255 (COL4A6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100587255 (COL4A6)
09162 Cancer: specific types
05222 Small cell lung cancer
100587255 (COL4A6)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100587255 (COL4A6)
09174 Infectious disease: parasitic
05146 Amoebiasis
100587255 (COL4A6)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
100587255 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nle04147
]
100587255 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
nle00536
]
100587255 (COL4A6)
Exosome [BR:
nle04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
100587255 (COL4A6)
Glycosaminoglycan binding proteins [BR:
nle00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100587255 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
100587255
NCBI-ProteinID:
XP_003262229
Ensembl:
ENSNLEG00000014085
LinkDB
All DBs
Position
X:complement(94813247..95088227)
Genome browser
AA seq
1687 aa
AA seq
DB search
MHPGLWLLLVTLCLTEELAGAGEKSYGKPCGGQDCSGSCQCFPEKGARGRPGPIGIQGPT
GPQGFTGSTGLSGLKGERGSPGLLGPYGPKGDKGPMGVPGFLGINGIPGHPGQPGPRGPP
GLDGCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGDPVLAPGSFKGMKGDPGLPGLDG
ITGPQGVPGSPGAVGPAGPPGLQGPPGPPGPPGPDGNMGLGFQGEKGVKGDVGLPGPAGP
PPSTGELEFMGFPKGKKGFKGEPGPKGFPGISGPPGFPGLGTTGEKGEKGIPGLPGPRGP
MGSEGVHGPPGQQGKKGTLGFPGLNGFQGIEGQKGDIGLPGPDVFIDIDGAVISGNPGDP
GVPGLPGLKGDEGIQGLRGPSGVPGLPALSGVPGALGPQGFPGLKGDQGNPGRTTIGAAG
LPGRDGLPGPPGPPGPPSPEFETETLHNKEPGFPGLRGEQGPKGNPGLKGIKGDSGFCAC
DGGVPNTGPPGEPGPPGPRGLIGLPGLKGARGDRGSGGAQGPAGAPGLVGPLGPSGPKGK
KGEPILSTIQGIPGDRGDSGSQGFRGVTGEPGKDGVPGLPGLPGLPGDGGQGFPGEKGLP
GLPGEKGHPGPPGLPGIGLPGLPGPRGLPGDKGKDGLPGQQGLSGPKGITLPCIIPGSYG
PSGFPGTPGFPGPKGSRGLPGTPGQPGSSGNKGEPGSPGLVHLPELPGFPGPRGEKGLPG
FPGLPGKDGLPGMIGSPGLPGSKGATGDIFGAENGAPGEQGLQGLTGDKGFLGDSGLPGL
KGVHGKPGLLGPKGERGSPGTPGQVGQPGTPGSSGPYGIKGKSGLPGAPGFPGISGHPGK
KGTRGKKGPPGSIVKKGLPGLKGLPGNPGLVGLKGSPGSPGVAGLPAPSGPKGEKGSVGF
VGFPGIPGLPGIPGTRGLKGIPGSTGKMGPSGRAGTPGEKGDRGNPGPVGIPSPRSPLSN
LWLRGDKGSQGSAGSNGFPGPRGDKGEAGRPGPPGLPGPPGLPGITKGVSGKPGPPGFMG
IRGLPGLKGSSGITGFPGMPGESGSQGIRGSPGLPGASGLPGLKGDNGQTAEISGSPGPK
GQPGESGFKGTKGKDGLIGNIGFPGNKGEDGKVGVSGDVGLPGAPGFPGVAGMRGEPGLP
GSSGHQGAIGPLGSPGLIGPKGFPGFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPG
PKGEKGYPGIGIGAPGKPGLRGQKGDQGFPGLQGPAGLPGAPGISLPSLIAGQPGDPGRP
GLDGERGRPGPPGPPGPPGPSSNQGDTGDPGFPGIPGPKGPKGDQGIPGFSGLPGKLGLK
GVRGEPGFMGTPGKVGPPGDPGFPGMKGKAGPRGSSGPQGAPGQTPTAEAVQVPPGPLGL
PGIDGIPGLTGDPGAQGPVGLQGSKGLPGIPGKDGPSGLPGPPGAFGDPGLPGLQGPPGF
EGAPGQQGPFGMPGMPGQSVRVGYTLVKHSQSEQVPLCPIGMSQLWVGYSLLFVEGQEKA
HNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWLSTTAPIPMMPVSQTQIPQY
ISRCSVCEAPSQAIAVHSQDITIPQCPLGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGSC
LEDFRATPFIECSGARGTCHYFANKYSFWLTTVEERQQFGELPVSETLKAGQLHSRVSRC
QVCMKSL
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
atgcaccctgggttgtggctgctcctggttacgttgtgcctgaccgaggaactggcagga
gcgggtgagaagtcttatggaaagccatgtgggggccaagactgcagtgggagctgtcag
tgttttcctgagaaaggagcgagagggcgacctggaccaattggaattcaaggcccaaca
ggtcctcaaggattcactgggtctactggtttatcgggattgaaaggagaaaggggttcc
ccaggccttctgggaccttatggaccaaaaggagataagggtcccatgggagttcctggc
tttcttggcatcaatgggattccgggccaccctggacagccaggccccagaggcccacct
ggtctggatggctgtaatggaactcaaggagctgttggatttccaggccctgatggctat
cctgggcttctcggaccacccgggcttcctggtcagaaaggatcaaaaggtgaccctgtc
cttgctccaggtagtttcaaaggaatgaagggggatcctgggctgcctggactggatgga
atcactggcccacaaggagtacccggatctcctggagctgtaggacctgcaggaccacca
ggattacaaggtcctccagggcctcctggccctcctggtcctgatgggaatatggggcta
ggttttcaaggagagaaaggagtcaagggggatgttggcctccctggcccagcaggacct
ccaccatctactggagagctggaattcatgggattccccaaagggaagaaaggattcaag
ggtgaaccagggcctaagggttttccaggcataagtggccctccaggcttcccgggcctt
ggaactactggagaaaagggagaaaagggaatccctggtttgccaggacctaggggtccc
atgggttcagaaggagtccacggccctccagggcaacagggcaagaaagggaccctggga
tttcctgggcttaatggattccaaggaattgagggtcaaaagggtgacattggcctgcca
ggcccagatgttttcatcgatatagatggtgctgtgatctcaggtaatcctggagatcct
ggtgtacctggcctcccaggccttaaaggagatgaaggcatccaaggcctacgtggccct
tctggtgtccctggcttgccagcattatcaggtgtcccaggagccctagggcctcaggga
tttccagggctgaagggggaccaaggaaacccaggccgtaccacaattggagcagctggc
ctgcctggcagagatggtttgccaggcccaccaggtccaccaggcccacctagtccagaa
tttgagactgaaactctacacaacaaagagccagggttccctggtctccgaggagaacaa
ggtccaaaaggaaacccaggcctcaaaggaataaaaggagactcaggtttctgtgcttgt
gacggtggtgttcccaacactggaccacccggggaaccaggcccacctggtccacggggt
ctcataggccttccaggccttaaaggagccagaggagatcgaggctctgggggtgcacag
ggcccagcaggggctccaggcttagttgggcctctgggtccttcaggacccaaaggaaag
aagggggaaccaattctcagtacaatccaaggaattccaggggatcggggtgattctggc
tcccagggcttccgtggtgtaacaggagaaccaggcaaggacggagtaccaggtttacca
ggtctgccaggccttccgggtgatggtggacagggcttcccaggtgaaaaggggttacct
ggacttcctggtgaaaaaggccatcctggtccacctggcctcccaggaattgggttacca
ggacttcctggaccccgtgggcttcctggagataaaggcaaggatggattacccggacaa
caaggcctttctggacctaagggaatcaccctgccctgtattattcctgggtcatacggt
ccatcaggatttccaggcactcctggattcccaggccctaaagggtcccgtggcctccct
gggaccccaggccagcctggatcaagtggaaataaaggagagccagggagtccaggattg
gttcatcttcctgaattaccaggatttcctggacctcgtggggagaagggattgcctggg
tttcctgggctccctggaaaagatggcttgcctgggatgattggcagtccaggcttacct
ggttccaagggagccactggtgacatctttggtgctgaaaatggtgctccgggggagcaa
ggcctacaaggattaacaggggacaaaggatttcttggagactctggccttccaggactc
aagggtgtgcacgggaagcctggcttactaggccccaaaggtgagcggggcagccctggg
acaccaggacaggtgggacagccaggcaccccaggatctagtggtccatatggcatcaag
ggcaaatctgggctcccaggagcaccaggcttcccagggatctcaggacatcctggaaag
aaaggaacaagaggcaagaaaggtcctcctggatcaattgtaaagaaagggctgccaggg
ctaaaaggccttcctggaaatccaggcctagtaggactgaaaggaagcccaggctctcca
ggggtcgctgggttgccagccccctctggacccaaaggagagaaggggtctgttggattc
gtaggttttccaggaataccaggtctgcctggtattcctggaacaagaggattaaaggga
attccaggatcaactggaaaaatgggaccatctggacgcgctggtactcctggtgaaaag
ggagacagaggcaatccggggccagtcggaatacctagtccaagaagtccattgtcaaac
ctttggctcagaggagacaaaggctctcaaggctcagccggatccaatggatttcctggt
ccaagaggtgacaaaggagaggctggtcgaccggggccaccaggcctgcctggacctcct
ggcctcccaggcattaccaaaggagttagtggaaagccagggccccctggcttcatggga
atccggggcttacctggcctgaaggggtcctctgggatcacaggtttcccaggaatgcca
ggagaaagtggttcacaaggtatcagagggtcgcctggactcccaggagcatctggtctc
ccaggcctgaaaggagacaacggccagacagctgaaatttccggtagcccaggacccaag
ggacagcctggtgaatctggttttaaaggtacaaaaggaaaagatggactaataggcaat
ataggcttccctggaaacaaaggtgaagatggaaaagttggtgtttctggagatgttggc
cttcctggagctccaggatttccaggagttgccggcatgagaggagaaccaggacttcca
ggttcttctggtcatcaaggggcaattgggcccctaggatcccccggattaataggaccc
aaaggcttccctggatttcctggtttacatggactgaatgggcttccgggcaccaagggt
acccatggcactccaggacctagtatcaccggtgtgcccgggcctgctggtctccctgga
cccaaaggagaaaaaggatatccaggaattggcatcggagctccagggaagccgggcctg
agagggcaaaaaggtgatcaaggtttcccaggtctccagggccctgctggtctccccggt
gccccaggcatctccttgccctcactcatagcaggacagcctggtgaccccgggcgacca
ggcctagatggagaacgaggccgcccaggcccccctggacctccaggtccccctgggcca
tcctcgaatcaaggtgacaccggagaccctggcttccctggaattcctggacctaaaggg
cctaagggagaccaaggaattccaggtttttctggcctccctggaaagctaggactgaaa
ggcgtgagaggtgagcctggcttcatggggactccaggcaaggttgggccacctggagac
ccaggatttcccggaatgaaggggaaggcggggccaagaggctcttctggcccccaaggt
gctcctggacaaacaccaactgcagaagctgtccaggttcctcctggacccttgggtcta
ccagggatcgatggcatccctggcctcactggggaccctggggctcaaggccctgtaggc
ctacaaggctccaaaggtttacctggcatccccggcaaagatggccccagtgggctccca
ggcccacctggggcttttggtgatcccggtctgcctggactgcaaggccctccaggattt
gaaggagctccagggcagcaaggccccttcgggatgcctggaatgcctggccagagcgtg
agagtgggctacacgttggtaaagcacagccagtcggaacaggtgcccctgtgtcccatc
gggatgagccagctgtgggtgggatacagcttactgtttgtggaggggcaagagaaagcc
cacaaccaggacctgggctttgctggctcctgtctgccccgcttcagcaccatgcccttc
atctactgcaacatcaacgaggtgtgccactatgccaggcgcaatgataaatcttactgg
ctctccactaccgcccctatccccatgatgcctgtcagccagacccagattccccagtac
atcagccgctgctctgtgtgtgaggcaccctcgcaagccattgctgtgcacagccaggac
atcaccatcccgcagtgccccctgggctggcgcagcctctggattgggtactctttcctc
atgcacactgccgctggtgccgagggtggaggccagtccctggtctcacctggctcctgc
ctagaggactttcgggccactcctttcatcgagtgcagtggtgcccgaggcacctgccac
tactttgcaaacaagtacagtttctggttgaccacagtggaggagaggcagcagtttggg
gagttgcctgtgtctgaaacgctgaaagctgggcagctccacagtcgagtcagtcgctgc
caggtgtgtatgaaaagcctgtag
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integrated database retrieval system
