Nomascus leucogenys (northern white-cheeked gibbon): 100587630
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Entry
100587630 CDS
T03265
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle04612
Antigen processing and presentation
nle05145
Toxoplasmosis
nle05152
Tuberculosis
nle05164
Influenza A
nle05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
100587630 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
100587630 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
100587630 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
100587630 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
100587630 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
nle01001
]
100587630 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
nle04054
]
100587630 (CIITA)
Enzymes [BR:
nle01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
100587630 (CIITA)
Protein kinases [BR:
nle01001
]
Serine/threonine kinases: Other
TAF1 family
100587630 (CIITA)
Pattern recognition receptors [BR:
nle04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
100587630 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_8
LRR_14
LRR_9
Motif
Other DBs
NCBI-GeneID:
100587630
NCBI-ProteinID:
XP_030654839
LinkDB
All DBs
Position
18:complement(92242187..92287535)
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AA seq
1107 aa
AA seq
DB search
MELGPLEGGYLELLNSDADPLCLYHFYDQMDLAGEAEIELYSEPDTDTINCDQFSRLLSD
MEGDEETREAYANIAELDQYVFQDSQLEGLSKDIFIEHIGPDEVIGESMEMPAEVGQKSQ
KRPFPEELPADLKHRKPAEPPTVVTGSFLMEPANDSSTLPCLPLPALFNEEPASGQMCLE
KTDQMPMPSSSSSLSCLNLPEGPIQFVSTISTLPQGLWQISGAGTGVSSIFIYHGEVPQA
SQVPPPSGLTVHGLPTSPDRPGSTSPFAPSATDLPSMPEPALTSRANMTEHKTSPTQSQA
AGEVSNKLPKWPEPVEQFYRSLQDTYRAEPAGPDGILVEVDLVRARLERSSSKSLERELA
TPDWAERQLAQGGLAELLLAAKEHRRPRETRVIAVLGKAGQGKSCWAGAVSRAWACGRLP
QYDFVFSVPCHCLNRPGSAYRLQDLLFSLGPQPLVAADEVFSHILKRPDRVLLILDAFEE
LEAQDGFLHSTCGPAPAEPCSLRGLLAGLFQKTLLRGCTLLLTARPRGRLGQSLSKADTL
FELSGFSTEQAQAYVMRYFESSGMTEHQDRALTLLQDRPFLLSHSHSPTLCRAVCQLSEA
LLELGDDAKLPSTLTGLYVGLLGRAALNSPPGALAELAKLAWELGRRHQSTLQEDQFPSA
DVRNWAMAKGLVKHPPGAAESELAFPSFLLQCFLGALWLALNGDIKDKELPQYLALTPRK
KRPYDNWLEGVPRFLAGLIFQPRARCLGALVGPSATALADRKQKVLARYLKRLQPGTLRA
RQLLELLHCAHEAEEAGIWQHVVQELPACLSFLGTRLTPPDAHVLGKALEAAGQDFSLDL
RSTGICPSGLGSLVGLSCVTGFRAALSDTVALWESLRQHGETKLLQAAEEKFTIEPFKVK
SLKDVEDLGKLVQTQRTRSSSEDTAGELPAVRDLKKLEFALGPISGPQAFPKLVRILTAF
SSLQHLDLDALSENKIGDEGVSQLSATFPQLKSLETLNLSQNSITDLGAYKLAEALPSLA
ASLLRLSLYNNCICDVGAESLARVLPDMVSLRVMDVQYNKFTAAGAQQLAASLRRCPHVE
TLAMWTPTIPFSVQEHLQQQDSRISLR
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atggagttggggcccctagaaggtggctacctggagcttcttaacagcgatgccgacccc
ctgtgcctctaccacttctatgaccagatggacctggctggagaagcagagattgagctc
tactcagaacccgacacagacaccatcaactgtgaccagttcagtaggctgttgtctgac
atggaaggcgatgaagagaccagggaggcttatgccaatatcgcggaactggaccagtat
gtgttccaggactcccagctggagggcctgagcaaagacattttcatagagcacatagga
ccagatgaagtgatcggtgagagtatggagatgccagcagaagttgggcagaaaagtcag
aaaagacccttcccagaggagcttccagcagacctgaagcaccggaagccagctgagccc
ccaactgtggtgactggcagtttcctaatggaaccagcgaatgactcctccaccctgccc
tgcctgccactgcctgccctgttcaacgaggagccagcctccggccagatgtgcctggag
aaaaccgaccagatgcccatgccttcctccagttcctcattgagctgcctgaatctccct
gagggacccatccagtttgtctccaccatctccactctgccccaggggctctggcaaatc
tctggggctggaacaggggtctccagtatattcatctaccacggtgaggtgccccaggcc
agccaagtaccccctcccagtggactcactgtccacggcctcccaacatctccagaccgg
ccaggctccaccagccccttcgctccatcagccactgacctgcccagcatgcctgaacct
gccctgacctcccgagcaaacatgacagagcacaagacgtcccccacccaaagccaggca
gctggagaggtctccaacaagcttccaaaatggcctgagccggtggagcagttctaccgc
tcactgcaggacacgtatcgggccgagcccgcaggccccgatggcatcctggtggaggtg
gatctggtgcgggccaggctggagagaagcagcagcaagagcctggagcgggaactggcc
accccggactgggcagaacggcagctggcccagggaggcctggctgagctgctgttggct
gccaaagagcaccggcggccgcgtgagacacgagtgattgctgtgctgggcaaagctggt
cagggcaagagctgttgggctggggcagtgagccgggcctgggcttgtggccggcttccc
cagtacgactttgtcttctctgtcccctgccactgcttgaaccgtccggggtctgcctat
cgcctgcaggatctgctcttctccctgggcccacagccactcgtggcggccgatgaggtt
ttcagccacatcttgaagagacctgaccgtgttctgctcatcctagacgccttcgaggag
ctggaagcgcaagatggcttcctgcacagcacatgcggaccggcaccggcggagccctgc
tccctccgggggctgctggccggccttttccagaagacgctgctccgaggttgcaccctc
ctcctcacagcccggccccggggccgcctgggccagagcctgagcaaggccgacacccta
tttgagctgtctggcttctccacggagcaggcccaggcctacgtgatgcgctactttgag
agctcaggcatgactgagcaccaagacagagccctgacgctcctccaggaccggccattt
cttctcagtcacagccacagccccactttgtgccgggcagtgtgccagctctcagaggcc
ctgctggagcttggggatgacgccaagctgccctccacgctcacaggactctatgtcggc
ctgctgggccgtgcagccctcaacagccccccgggggccctggcagagctggccaagctg
gcctgggagctgggccgcagacaccaaagtaccctacaggaggaccagttcccatccgca
gacgtgaggaactgggcgatggccaaaggcttagtgaaacaccccccgggggccgcagag
tccgagctggccttccccagcttcctcctgcaatgcttcctgggggccctgtggctggct
ctgaatggcgacatcaaggacaaggagctcccgcagtatctagcattgaccccaaggaag
aagaggccctatgacaactggctggagggcgtgccacgctttctggccgggctgatcttc
cagcctcgcgcccgctgcctgggagccctagtcgggccgtcggcgactgccttggcggac
aggaagcagaaggtgcttgcgaggtacctgaagcggctgcagccggggaccctgcgggcg
cggcagctgctggagctgctgcactgcgcccacgaggccgaggaggctggaatttggcag
cacgtggtgcaggagctccccgcctgcctctcttttctgggcacccgtctcacacctcct
gatgcacatgtactgggcaaggccttggaggcggcgggccaagacttctccctggacctc
cgcagcactggcatttgcccctctggattggggagcctcgtgggactcagctgtgtcaca
ggtttcagggctgccttgagcgacacagtggcgctgtgggagtccctgcggcagcatggg
gagaccaagctacttcaggcagcagaggagaagttcaccatcgagcctttcaaagtcaag
tccctgaaggatgtggaagacctgggaaagcttgtgcagactcagaggacgagaagttcc
tcggaagacacagctggggagctccctgctgttcgggacctaaagaaactggagtttgcg
ctgggccccatctcaggcccccaggctttccccaaactggtgcggatcctcacggccttt
tcctccctgcagcatctggacctggatgcgctgagtgagaacaagatcggggacgagggt
gtctcgcagctctcagccaccttcccccagctgaagtccttggaaaccctcaacctgtcc
cagaacagcatcacagacctgggtgcctacaaactcgccgaggccctgccttcactcgct
gcatccctgctcaggctgagcttgtacaataactgcatctgcgacgtgggagccgagagc
ctggctcgtgtgcttccggatatggtgtccctccgggtgatggacgtccagtacaacaag
ttcacggctgccggggcccagcagctcgctgccagccttcggaggtgtcctcatgtggag
acactggcgatgtggacgcccaccatcccattcagtgtccaggaacacctgcaacaacag
gattcacggatcagcctgagatga
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