Nomascus leucogenys (northern white-cheeked gibbon): 100587803
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Entry
100587803 CDS
T03265
Symbol
PCDH7
Name
(RefSeq) protocadherin-7 isoform X1
KO
K16498
protocadherin delta 1
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
100587803 (PCDH7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nle01009
]
100587803 (PCDH7)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nle04515
]
100587803 (PCDH7)
Protein phosphatases and associated proteins [BR:
nle01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100587803 (PCDH7)
Cell adhesion molecules [BR:
nle04515
]
Cadherins
Protocadherins
100587803 (PCDH7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Mid2
TMEM154
Cadherin_pro
LYRIC
KIAA1549
MLANA
EphA2_TM
Fibulin_C
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
100587803
NCBI-ProteinID:
XP_012355073
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All DBs
Position
20:complement(54485639..54909604)
Genome browser
AA seq
1255 aa
AA seq
DB search
MLRMRTAGWARGWCLGCCLLLPLSLSLAAAKQLLRYRLAEEGPADVRIGNVASDLGIVTG
SGEVTFSLESGSEYLKIDNLTGELSTSERRIDREKLPQCQMIFDENECFLDFEVSVIGPS
QSWVDLFEGRVIVLDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDRDFGRNGIERY
ELLQEPGGGGSGGESRRAGAADSAPYPGGGGNGASGGSSGGSKRRLDAPEGGGGTNPGGR
SSVFELQVADTPDGEKQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITD
VNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRL
DETSGWLSVLHRIDREEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVPSIEIRKI
GRIPLKDGVANVAEDVLVDTPIALVQVSDRDQGENGVVTCTVVGDVPFQLKPASDTEGDQ
NKKKYFLHTSTPLDYEATREFNVVIVAVDSGSPSLSSNNSLIVKVGDTNDNPPVFGQSVV
EVYFPENNIPGERVATVLATDADSGKNAEIAYSLESSVMGIFAIDPDSGDILVNTVLDRE
QTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGM
VTVMDADKGRNAEMSLYIEENNNIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDP
PRSATATVSLFVMDENDNAPTVTLPKNISYTLLPPSSNVRTVVATVLATDSDDGINADLN
YSIVGGNPFKLFEIDPTSGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVN
ESVSNATVIDSQIARSLHTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVM
ARYCRSKNKNGYEAGKKDHEDFFTPQQHDKSKKPKKDKKNKKSKQPLYSSIVTVEASKPN
GQRYDSVNEKLSDSPSMGRYRSVNGGPGSPDLARHYKSSSPLPTVQLHPQSPTAGKKHQA
VQDLPPANTFVGAGDNISIGSDHCSEYSCQTNNKYSKQPFRRVTFSVVSQPQDPHQGSLQ
SCYDSGLEESETPSSKSSSGPRLGALPLPEDNYERTTPDGSVGEAEHMENDSRPLPDVAL
TGKCTRECDEYGHSDSCWMPVRTSPERKKSQPKLSTFMPVDERGSQEKLANGEAAIMGDR
NRNLLNKKLTSSYETFSAASFSKNEEANPEDIPLTKTGEYKPSPVNTLTRREVYL
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggatgcggaccgcgggatgggcgcgcggctggtgcttgggctgctgcctcctc
ctgccgctctcgctcagcctggcggccgccaagcagctcctccggtaccggctggccgag
gagggccccgccgacgtccgcatcggcaatgtggcttcagacctgggcatcgtgactgga
tcgggtgaggtgactttcagcctggagtctggctccgagtacctgaagatcgacaacctc
acgggcgagctgagcacgagcgagcggcgcatcgaccgcgagaagctgccccagtgtcag
atgatcttcgacgagaacgagtgcttcctggacttcgaggtgtcggtgatcgggccctcg
cagagctgggtggacctgtttgagggtcgggtcatcgtgcttgacatcaacgacaacacg
cccaccttcccgtcgcccgtgctcacgctcacggtggaggagaaccggccggtgggcaca
ctttacctgctgcccacagccactgaccgcgacttcggccgcaacggcatcgagcgctac
gagctgctccaggagcccggaggcggcggcagcggcggcgagagccggcgcgccggggcg
gccgacagcgccccctaccccgggggcggcgggaacggcgcgagcggcggcagctcggga
ggctccaagcggcggctggacgcaccagagggcggcggcggcaccaaccccggcggccgc
agcagcgtgttcgagctgcaggtggcggacaccccggacggcgagaagcagccgcagctg
atcgtgaagggggcgctggaccgcgagcagcgcgactcctacgagctgaccctgcgggtg
cgcgacggcggcgacccgcctcgctcctcgcaggccatcctacgggtccttatcaccgac
gtgaacgacaacagcccccgcttcgagaagagcgtgtacgaggccgacttggctgagaac
agcgccccggggacccccatcctgcaactgcgcgcagccgacttggacgtgggggtcaac
ggacagatcgagtacgtgtttggggcggccaccgagtcggtgaggcggctgctgcgcctt
gacgagacgtccggctggctcagcgtcctgcaccggatcgaccgcgaggaggtgaaccag
ctgcgcttcacggtcatggcccgcgaccgcgggcagccccccaagaccgacaaggccacc
gtggtccttaacatcaaagacgagaacgacaacgtgccgtccattgaaatccgcaagatt
gggcgcatccccctcaaggacggggtggccaacgtggccgaggacgttctggtcgacacc
cccatcgctctggtgcaggtgtccgaccgagatcaaggcgagaacggggtggtcacctgc
actgtggtgggcgacgtgcccttccagctcaagccagccagcgacaccgagggcgaccag
aacaagaaaaagtacttcttgcacacctcgacccctctggactacgaggccacccgggag
ttcaacgtggtcatcgtggcggtggactcaggcagccccagcctctcgagcaacaactcc
ctgattgtcaaggtgggagacaccaacgacaacccgcccgtgttcggccagtcggtggtg
gaggtttacttccctgagaacaacatccccggcgagagggtggccacggtgctggcgaca
gacgcagacagcggaaagaacgccgagatcgcctactcgctggagtcctctgtgatgggg
atctttgccatcgatcctgattctggggacatcctggtcaatacggtgctggaccgcgag
cagactgacaggtatgagtttaaagttaacgccaaagacaaaggcatccccgtgctgcag
ggcagcactacggtgattgtgcaggtggctgataagaatgacaatgaccctaagtttatg
caggacgtcttcaccttttatgtgaaagaaaacttgcagcccaacagccctgtggggatg
gtcaccgtgatggatgctgacaaggggcggaatgcagagatgagcctgtacatagaggag
aacaataacattttttctattgaaaatgacacggggaccatttactccacaatgtctttt
gaccgggaacatcagaccacgtacactttcagagtcaaggctgtggatgggggagatcct
cccagatctgccacagctacagtctcgctttttgtgatggatgaaaatgacaatgctccc
acagttacccttcccaaaaacatttcctacactttactgccaccttcgagtaatgtcagg
acagtagtagctacagtgttggcaacagacagtgacgatggcatcaatgcagacctgaac
tacagcattgtgggaggaaatcccttcaagctgtttgaaattgatcccactagtggtgtg
gtttccttagtgggaaaactcacccaaaagcattatggcttgcacaggttggtggtgcaa
gtgaatgacagtgggcagccttcccagtccaccacgactctggtgcatgtgtttgtcaat
gaaagtgtttctaatgcaactgtgattgactcccagatagctagaagtttgcacacccca
ctcacccaggatatagctggtgacccaagctatgaaattagcaaacagagactcagtatt
gtcattggcgtggttgctggcattatgacagtgattctaatcatcttaattgtagtaatg
gcaaggtactgcaggtccaaaaataaaaatggctatgaagctggcaaaaaagatcacgaa
gacttttttacaccccaacagcatgacaaatctaaaaagcctaaaaaggacaagaaaaac
aaaaaatctaagcagcctctctacagcagcattgtcactgtggaggcttctaaaccaaat
ggacagaggtatgatagtgtcaatgagaagctgtcagacagcccaagcatggggcgatac
agatctgttaatggtgggcccgggagtcctgacctggcaaggcattacaaatctagttcc
ccattgcctactgttcagcttcatccccagtcaccaactgcaggaaaaaaacaccaggcc
gtacaagatctaccaccagccaacacatttgtgggagcaggagacaacatttcaattgga
tcagatcactgctctgagtacagctgtcaaaccaataacaagtacagcaaacagccattt
cgtagagtgacgttttctgttgtgagtcagcctcaggacccacatcaggggtcactgcag
agttgctatgacagcgggctggaggagtcagaaacaccaagcagtaagagttcatcaggg
ccaagactgggtgcccttccactcccagaggacaactatgaaaggaccacgccggatggc
agtgttggtgaggcagagcatatggaaaatgattcaaggcctcttccggatgtagccctg
actgggaagtgcactcgtgagtgtgatgagtatggccactcagactcctgctggatgcct
gtccgcacttctccggagaggaagaagagccagcctaaactctccactttcatgcctgtt
gatgaacgaggaagccaggaaaagctggccaatggggaggccgccatcatgggtgaccgc
aacaggaacctcctgaacaaaaagttgacctcatcctatgagaccttcagtgcagctagt
ttcagcaaaaatgaggaagccaaccctgaggatattccccttacaaaaacaggggaatat
aagccatctcctgtcaatactctcactagaagagaagtttacctgtag
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