KEGG   Nomascus leucogenys (northern white-cheeked gibbon): 100587809
Entry
100587809         CDS       T03265                                 
Name
(RefSeq) LOW QUALITY PROTEIN: WD40 repeat-containing protein SMU1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
nle  Nomascus leucogenys (northern white-cheeked gibbon)
Brite
KEGG Orthology (KO) [BR:nle00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nle03041]
    100587809
Spliceosome [BR:nle03041]
 Complex B
  Other components
   Complex B specific factors
    100587809
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML LisH_TPL ANAPC4_WD40 Beta-prop_RIG_2nd NBCH_WD40 WDR90_beta-prop_4th Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Ge1_WD40 Beta-prop_WDR75_2nd Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_Nup120_160 WD40_RFWD3 Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_VPS8 Beta-prop_SCAP Beta-prop_WDR35_TULP_N TFIIIC_delta Beta-prop_EIPR1 Beta-prop_BBS7 Beta-prop_IP5PC_F eIF2A DUF7165 zf_topless Beta-prop_IFT122_2nd LisH_WDR26
Other DBs
NCBI-GeneID: 100587809
NCBI-ProteinID: XP_012366960
LinkDB
Position
12:44129962..44131930
AA seq 513 aa
MSIEIESSDVIRLIMQYLKENSLRRALATLQEEATVSLNTVDSIESFVADINSGHWDTVV
XAIQSLKLPDKTLIYLYEQVVLELIELGELGAARSLLRQTDPTITLKQTQPEQYIHLENL
SARSYLDPHEAYSDGSSKXKRRAAIAQALAGEVSLVPPSRLMALLGQALKWQQHQGLLPP
GMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSRVECARFSPDGQYSVTGSVDGFTEV
WNFTTGKIRKDLKYQAQDSFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSRQCLR
RCERAHSKGVTCLSFSKDSSQILSVSFDQTIRIHGLKSGKTLKEFCGHSSFVNKATFIQD
GHYIISASFDGTVKIWNMKTTECSNTFKSLGSTAGTDITINSVILLPKNPQHFVLCNRSN
TVVIMNMQGQIVRNFSSGKREGGDFVCCALSPRSEWIYCVGEGFVLYCFSTVTGKLERTL
TVHKKDVIGIAHHPHQNLIATYSEDRLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtcgatcgaaattgaatcttcggatgtgatccgccttatcatgcagtacttgaaggag
aacagtttacgtcgggcattagccaccttgcaggaggaggctactgtgtctctgaatact
gtggacagcattgagagttttgtggctgacattaacagtggccattgggatactgttgta
nnggctatacagtctctgaaattgccagacaaaaccctcatttacctctatgaacaggtt
gttctggaattgatagagctaggtgaattgggtgctgccaggtcactattgagacagact
gatcccacgatcacattaaaacaaacacagccagagcaatatattcatctggagaacctt
tcggccaggtcttaccttgatcctcatgaggcatactcagatggaagtagcaaangaaag
agaagagcagcaattgcccaggccttagctggtgaagtcagtctggtacctccatctcgt
ctcatggcattgctgggacaggcactgaagtggcagcagcatcagggattgcttcctcct
ggtatgaccatagatttgtttcgaggcaaagcagctgtcaaagatgtggaagaagaaaag
tttcctacacaactgagcaggcatattaagtttggtcagaaatcacgcgtggagtgtgct
cgattttctccagatggtcagtattcggtcactgggtctgttgatggattcactgaagta
tggaactttactactggaaaaatcagaaaggatcttaagtaccaggcccaggatagcttt
atgatgatggatgatgctgtcctctgcatgtgtttcagcagagatacagaaatgttagca
actggggcccaagatggaaaaatcaaggtatggaagattcagagtagacaatgtttaagg
agatgtgagagggcacacagtaagggtgtcacctgtctaagcttttctaaggatagcagt
cagatccttagtgtttcttttgaccagacaattagaattcatggtttaaaatctgggaaa
accctgaaggaattttgtggccattcctcctttgttaacaaagcaacatttatacaagac
ggacattatattattagtgcatcctttgatggcactgtaaagatctggaatatgaagacc
acagaatgttcaaatacctttaaatccctgggcagcactgcggggacagatattaccatc
aacagtgtgattctacttcctaaaaatcctcagcactttgtgttgtgcaacagatcaaac
acggtggtcatcatgaacatgcaggggcagattgtcagaaacttcagttctggtaaaaga
gaaggtggggacttcgtttgctgtgccctctctccccgtagtgaatggatctactgtgta
ggggagggctttgtgctctactgtttcagtacagtcactggcaaactggagagaactctg
acagtgcacaagaaggatgtgattggtattgcacatcaccctcatcagaacctgattgct
acctacagtgaagacagactcctaaagctctggaaaccataa

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