Nomascus leucogenys (northern white-cheeked gibbon): 100588117
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Entry
100588117 CDS
T03265
Symbol
PCDH9
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
100588117 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nle01009
]
100588117 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nle04515
]
100588117 (PCDH9)
Protein phosphatases and associated proteins [BR:
nle01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100588117 (PCDH9)
Cell adhesion molecules [BR:
nle04515
]
Cadherins
Protocadherins
100588117 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
V_ATPase_I
Big_9
RCR
EphA2_TM
DUF6249
DUF6377
7tm_3
MAP17
Motif
Other DBs
NCBI-GeneID:
100588117
NCBI-ProteinID:
XP_003257466
Ensembl:
ENSNLEG00000015962
UniProt:
A0A2I3HCQ2
LinkDB
All DBs
Position
5:complement(92142889..93053969)
Genome browser
AA seq
1237 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNDNFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAK
VTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSVVAEVFAVDVDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIIAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGPAPPTTFKPNSPDLAKHYKSASPQPAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQCNSHSKSD
NIPVTPQKCPSSAGFHIQENEESHYESQRRVTFHLPDGSQESCSDSGLGDHEPVGSGTLI
SHPLPLVQPQDEFYDQASPDKRTEADGNSDPNSDGPLGPRGLAEATEMCTQECLVLGHSD
NCWMPPGLGPYQHPKSPLSTFAPQKEWVKKDKLVNGHTLTRAWKEDSNRNQFNDRKQYGS
NEGHFNNGSHMTDIPLANLKSYKQAGGAIESPKEHQL
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggctgctctgattgcctgtttaaggctggattcc
gcaatagctcaagaacttatttacactattagagaggaattgcctgaaaatgtgcccata
ggaaacataccaaaggatctgaacatttctcacatcaatgctgccacagggaccagcgcc
agccttgtctacagactggtttctaaagctggggatgcccctttggtgaaagtatccagc
agcactggggaaattttcacaacctccaacagaatagacagagaaaaactctgtgctggc
gcctcatatgctgaggagaatgagtgtttctttgaacttgaggtggtgatcctccccaat
gatttcttcaggctgattaaaataaaaataattgtcaaggataccaatgataatgccccc
atgtttccatctcctgtcatcaatatttccattccagaaaacactttgatcaacagccgc
tttccaattccatcagcaacagatcctgacacaggcttcaatggtgtacagcattatgaa
ttgttaaatgggcagagtgtttttggactggatatcgtggaaactccggagggagagaag
tggccacaattgattgttcagcaaaacttggatagagaacagaaagatacctatgtgatg
aaaatcaaagtagaggatggaggcactccacagaaatccagtacggccatactgcaggtc
acagtaagtgatgtaaatgacaacaggccggtgtttaaagagggtcaagtggaggtgcat
attccagagaatgctcccgtaggtacctctgtaattcagctccatgccactgatgcagat
ataggcagtaatgctgaaatccggtacatttttggtgcccaggtcgcccctgcaaccaaa
agactctttgctttaaataatactactgggctgattacagttcagaggtccttagataga
gaggagacagccattcacaaagtgacagtgctggctagtgacggcagctccactcctgct
cgagcaacggttaccatcaatgtcaccgatgtaaatgataaccctcctaatatagacctc
aggtacattataagtcccatcaatggcaccgtgtatttatctgagaaagatcctgtcaat
acaaagattgccctaattacagtttcagataaggacacagatgtgaatggcaaagtgatc
tgttttattgaaagagaggtcccatttcatttgaaggcagtatatgacaaccaatatttg
ttagagacctcttctttgttggactatgagggcaccaaagaattcagctttaaaattgtt
gcctctgattctgggaagcccagtttaaatcagactgccctggtaagggttaagcttgag
gatgaaaatgacaacccaccaattttcaaccagcctgtaattgagctgtcagtttctgaa
aacaaccgacgtgggttatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagacattgtttatcagcttggaccgaatgcctccttctttgatctggaccgaaaa
acaggagttttgacagcctccagagtctttgacagagaagaacaagaacgattcattttt
acagtaactgccagggacaatgggacccctcccctccaaagccaagcggctgtgatagtt
actgttctggatgagaatgacaatagccccaagtttactcataatcattttcaatttttt
gtgtctgagaatctgccaaagtatagtactgtgggggtaatcacagtgacagatgcagat
gctggagagaataaagctgtgactctttccattctaaatgacaacgataattttgtgttg
gatccctattctggagtcataaagtcaaatgtctcatttgatagagagcagcaaagttcc
tacacttttgatgtcaaagccactgatggaggacaaccacctcgttcctctactgcaaaa
gtaactatcaacgtcatggatgtcaatgacaacagcccagttgtcatttctccaccgtct
aatacttcctttaagttggtgcccctctcagccattcctggctccgtggtagcagaagtt
tttgcagtggatgttgacactggaatgaacgctgaactaaagtatactatagtgagtgga
aacaataaaggcttatttcggattgatccagtaacaggtaacattactctggaagaaaaa
ccagcacctactgatgtgggattgcatcgtttggtggtcaacataagtgacctggggtac
cctaagtctttgcacacgcttgtgcttgtattcctttacgttaacgacactgctggaaat
gcctcctatatctatgacttgatccgcaggactatggagaccccgttggacaggaacata
ggggatagtagccaaccctatcaaaatgaggactatctaaccatcatgattgccatcatc
gctggtgccatggtagtcatcgttgtgatcttcgtcaccgttctggtgcgctgtcgccat
gcatcaaggttcaaagcagctcagaggagcaagcaaggtgccgaatggatgtccccaaac
caggagaacaaacaaaacaagaaaaagaaaagaaagaaaaggaagtctcccaaaagctct
cttttgaactttgttactatcgaagagtccaaacccgatgatgcagttcatgaacctatc
aatgggacaataagcctgccggctgaactggaggagcaaagtataggaagatttgactgg
ggcccggcacctccaacaacgttcaagcctaacagtcctgacctggccaagcactacaaa
tctgcttctccacagcctgcttttcatctcaaaccagacactccagtttccgtgaaaaag
caccatgtgattcaggaactccctttggacaacacctttgtcgggggttgtgacaccctt
tctaaacgctcttccactagttcagatcacttcagtgcctcagagtgcagttcccaagga
ggcttcaagacaaagggccccttacacaccagacagtgtaactcacacagcaaaagtgac
aatattcctgtcactcctcagaaatgtcccagctccgcgggtttccacattcaggagaat
gaagaaagccattacgagtcgcagcgccgtgttacctttcacctccctgatggctcccag
gaaagctgcagtgacagtggtctaggagaccacgagccggtgggtagtggaaccctgatc
tcacaccctcttcctctggttcagccacaggacgaattctacgaccaggcctctccggac
aagaggaccgaagcagatggcaactctgatcccaactctgacgggcctttgggtccacgg
ggattagctgaagctacagagatgtgcactcaagagtgcttggttttgggtcactctgat
aattgctggatgcctcctggcttgggtccatatcaacaccctaaatctcctctctcaacc
tttgcaccccagaaagaatgggtgaagaaggacaagcttgtgaatgggcacaccctgacc
agagcctggaaagaagacagcaacaggaaccagttcaatgaccgtaagcagtatggctcc
aacgaaggccatttcaacaatggcagccacatgacagacattcctctggcaaatctgaag
tcttataagcaagcaggaggtgctattgagagtcctaaggagcaccaactctaa
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integrated database retrieval system
