Nomascus leucogenys (northern white-cheeked gibbon): 100589473
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Entry
100589473 CDS
T03265
Symbol
FOCAD
Name
(RefSeq) focadhesin isoform X1
KO
K27498
focadhesin
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nle03019
]
100589473 (FOCAD)
Messenger RNA biogenesis [BR:
nle03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
100589473 (FOCAD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Focadhesin
DUF3730
HEAT
Motif
Other DBs
NCBI-GeneID:
100589473
NCBI-ProteinID:
XP_030675409
Ensembl:
ENSNLEG00000017507
LinkDB
All DBs
Position
1a:21396183..21715683
Genome browser
AA seq
1856 aa
AA seq
DB search
MIMNKNDNLYMSQPPIYFCIVILYFGFIADHQGNFHPHRLAAENEAAHIHVREAKMSDDI
RKRFEFPNSLIQSQAVGHLIAAVLKENGFSEKIHQSTNQTPALNLLWEKCCSDNVVVRTA
CCEGLVALVAQDHAEFSYVLNGILNLIPSTRNTHGLIKAIMKLLQMQALKEGQGGEKNIQ
SIYTIRNHPHPLITVLEHRPDCWPVFLQQLTAFFQQCPERSEVSCIQIMAPFLWYLYCEP
SQLQEYAKLRLALLKVLLQPRVLCDKDQPSILEQQILQLCCDIVPCLQIKDLIQTTEAMM
FIEEVYLSLLHHPVFWKIQLTQMTLQLLCVSEVSLKITGECSSLIHLLEHSVELLKEDFP
VELVIIGIALLLLQTPASQQKPILNLALKLLSVTEDQKIPKSSLLLVMPILQILSSTALE
DCISVDEEGPSRQQLALNLLEMIQQECYRDDHQKLSYKLVCPVTSMYGSIFTAWRILEVM
TDSSAASDWLASVESLLPITAVIPVPAFLLLAHLLVEDKGQNLHQILKVTTELAQADSSQ
VPNLIPVLMFKLGRPLEPILYNDILYTLPKLGVHKVCIGQILRVIQLLGTTPRLRAVTLR
LLTSLWEKQDRVYPELQRFMAVSDVPSLSVGKEVQWEKLIAKAASIRDICKQRPYQHGAD
MLAAISQVLNECTKPDQATPAALVLQGLHALCQAEVVCIRSTWNALSPKLSCDTRPLILK
TLSELFSLVPSLTVNTTEYENFKVQVLSFLWTHTQNKDPIVANAAYRSLANFSAGEHTIL
HLPEKIRPEIPIPEELDDDEDDEDVDLSVPGSCYLKLLSLTSPLVLPALEEFFTSLVKQE
MVNMPRGIYHSALKGGARSDQGKTIAGIPNFILKMYETNKQPGLKPGLAGGMLFCYDVSM
YQSKDGKPLNRLMASRGRSFKQTSLALVHEVHIQLSEWHRAIFLPQAWLAYMNRAYHAIL
QGRLGELELQLKHGKEEPEEVQYKKSTAWLWVRDMLTDEITKAAAKESPVVKGNALLALS
SLAVVVSRHEASLSSDSDGLLEVQPNFLSMREWVSMVLDTLLVIVDSHYQPRGQLLSWFY
YKSYSGENTASAIARSAAATALSLLVPVFIISCKEKVEEILNMLTARLPGKPSADESQAV
QIHMGLALGMFLSRLCEEKLSDISGQEMNLLLMKSLDALENCCFDTSLEYNTGCILGVGL
VLSLMSHSSQMQSRVHVAASLRKLSAYLDDSGSQSRTFQEVLAYTLSCVCTSAFSAGIIE
ATEAEDVMNKLQLLVENSQQTSGFALALGNIVHGLSVCGHGKAEDLGSKLLPAWIRIVLT
EGTPTMLCLAALHGMVALVGSEGDVMQVKSEAIQSSHFQGRLNEVIRTLTQVISVSGVIG
LQSNAVWLLGHLHLSTLSSSQSRASVPTDYSYLPESSFIGAAIGFFITGGKKGPESVPPS
LLKVVMKPIATVGESYQYPPVNWAALLSPLMRLNFGEEIQQLCLEIMVTQAQSSQNAAAL
LGLWVTPPLIHSLSLNTKRYLLISAPLWIKHISDEQILGFVENLMVAVFKAASPLRNPEL
CPSALQGLSQAMKLPSPAHHLWSLLSEATGKIFDLLPNKIRRKDLELYISIAKCLLEMTD
DDANRITQVTKSNIEKAAFVKLYLVSQGRFPLVNLTDMLSVAVQHCEKEVLAWMFLHSLY
QARIVSHANTGILKRMEWLLELMGYIRNVAYQSTSFQNTALDEALDFFLLIFATAVVAWA
DHTSPLLLGLSASWLPWHQENGPAGPVPSFLGRSPMHRVTLQEVLTLLPNSMALLLQKEP
WKEQTQKFIDWLFSIMESPKEALSAKSRDLLKATLLSLRVLPEFKKKAVWTRAYGW
NT seq
5571 nt
NT seq
+upstream
nt +downstream
nt
atgattatgaataaaaatgataatctctatatgtctcagcctccaatttatttttgtatt
gtgattttgtattttggttttattgcagaccatcaaggaaattttcatccacacagatta
gcagctgaaaatgaagctgcacacatacatgtaagagaagcaaaaatgtcagatgatatc
aggaaaaggtttgaatttccaaattctcttatccaatcacaggctgtgggtcatcttatt
gctgcagtcctaaaggagaatggtttttcagaaaagattcaccaatctacaaatcagact
cctgctttgaacttgctgtgggagaagtgttgcagtgacaatgtagtggttcgaacagcc
tgctgtgaaggtctggtggccctcgttgctcaggatcatgcagagttcagctatgttctc
aatgggatactcaacttgattccatcaaccagaaatacacatggcttgataaaagccatt
atgaaattactacaaatgcaagctcttaaggaaggacaaggtggggaaaagaatattcag
agtatatataccattagaaatcatcctcatcctttgatcactgtgcttgaacacagacct
gattgctggccagtgtttttgcagcagctgacagcgtttttccagcagtgccctgaaagg
tcagaagtttcatgcattcaaataatggcaccatttctgtggtatctgtattgtgaacca
tctcagttacaagaatatgctaaactccgactggccttgctgaaagtcttacttcaaccc
cgggttctttgtgacaaagatcaaccatcaatactggaacagcagatacttcaactgtgt
tgtgacatagttccatgtttgcagataaaagatttgatacagacaacagaagcgatgatg
tttattgaggaagtatatttaagccttttgcatcatcctgttttctggaaaattcagctt
acccagatgactcttcagctgctgtgtgtcagtgaagtcagcttaaagataactggtgaa
tgttcatctttaattcaccttttagagcacagtgttgaacttctgaaggaggattttcct
gttgaactggtcataattggaatagctttactacttctacagactccagcaagtcagcag
aagccaatcttaaatctagctttgaagctcctctctgttactgaggatcagaaaatccca
aagtcctctctgctgctagtgatgccaattctgcagatactatcttctactgccttggaa
gactgtatatctgtggatgaagaaggtccctctaggcagcagttggctctaaaccttttg
gaaatgatacagcaggaatgttacagagatgaccaccaaaagctctcctacaagctcgtg
tgccctgtaaccagtatgtatggttccatatttacagcctggaggattcttgaagtaatg
acagactcgtctgctgcaagtgactggttggcttcagtagagtcattgcttcctattact
gctgtgatccctgtgcctgcctttcttctgctggctcacctccttgttgaagacaaagga
cagaatcttcaccaaatactgaaggtcactacagaattagcccaagcagattcctcccag
gtgccaaatctgattccagttttgatgttcaaattgggaagaccactggaacctatatta
tataatgatatattgtatactttacctaagcttggtgttcacaaggtgtgtataggacaa
attctacgagtaatacaactacttggaaccacaccacgactaagagcggtcactttgcgc
ttgctgacatctttgtgggaaaagcaggaccgagtctatcctgaactgcagcgtttcatg
gctgtgtctgatgtaccttctctttcggtgggcaaggaagtccaatgggagaaactgatt
gcaaaagcagcatcaatcagagatatatgtaagcagaggccatatcaacatggtgcagat
atgttggcagctatttctcaggtgttgaatgaatgcaccaagcctgatcaagctactcca
gcagccttggtattacaaggtcttcatgcactctgtcaagctgaggttgtttgcattcgc
tccacttggaatgctctctctccaaagctgagttgtgacacaagacctctcattctgaag
acactgagtgaactattttctctagttccttccttaacagtcaatacaactgaatatgag
aattttaaagttcaagtcctcagcttcctctggactcatactcaaaacaaggacccaatt
gtagcaaatgctgcatatagatccctggccaactttagtgcgggagaacacaccattctt
catctgcctgaaaagataagaccagaaattcccattcctgaagagttagatgacgatgaa
gatgatgaggatgtggatctttctgttcctggttcttgctatctcaaactgttgtcactc
acttcccctttggttttaccagctttggaggaattttttacatcacttgtgaagcaagaa
atggtgaatatgcctcgtgggatatatcactctgcattaaaaggaggtgcccgctcagac
caaggaaagactatagcaggaatccccaattttatattgaaaatgtatgaaacaaacaag
caaccaggattgaaacctggccttgcaggtggtatgttattttgctatgatgtttccatg
tatcagagtaaagatggaaaaccattgaatagactgatggccagtagagggcgaagtttc
aagcagacttcacttgctcttgtacatgaggttcatatccagctttcagagtggcaccgt
gcgatttttcttccacaggcctggcttgcatacatgaatcgagcttatcatgccatttta
cagggaagactaggagagctggagttgcagttaaaacatggaaaagaagaacctgaggag
gtgcaatacaaaaaaagcacagcctggctctgggttagagacatgctgactgatgagatc
accaaggcagctgcaaaggagagtccggtagtgaaaggtaatgcgctgttagctctaagc
agccttgctgtcgtcgtatctagacatgaagccagcctctcttcagactctgatgggctc
ctggaggttcaacctaatttcctttcaatgagagagtgggtttccatggtacttgataca
ctcttggtcattgtggatagccattaccaacccagagggcaacttctctcctggttttat
tataagtcctattctggtgaaaacacagctagtgccattgcccgttctgctgccgccacg
gctttgtctctccttgtgccagttttcattatctcttgtaaagagaaggttgaggaaatc
ctgaacatgctgactgccaggttacctgggaaaccaagtgctgatgagtctcaagccgtg
caaatccacatgggccttgctttagggatgtttctctctcgcttgtgtgaagagaaactc
agtgatatatctggccaagagatgaaccttcttttgatgaagtcgttggatgccctggaa
aattgctgctttgacactagtcttgaatacaacacgggctgtatattgggagttggactt
gttctgtccctcatgagccacagcagccaaatgcagtcccgcgttcatgtggcagcatca
cttcggaagctgtctgcgtacctagatgacagtgggagccagagcagaacatttcaggag
gtccttgcctacacacttagctgtgtatgtacatcagcgttcagtgctggaattattgag
gctacagaggctgaggatgttatgaacaagcttcaactgttagtggagaatagccagcag
acttcaggttttgccctggctttaggaaacatagttcatggattgtctgtgtgtggacat
ggaaaagctgaagacttgggcagcaaactactccctgcctggatcagaattgttctaaca
gagggaactcccacaatgctttgtctggcagctcttcatggcatggtggccttggtaggc
tctgaaggggatgtaatgcaggtgaaatcagaagccatccagtcctctcattttcaaggc
agacttaatgaagtcatcagaaccttaactcaggtcattagtgtctctggggtgattggt
ctccagtcaaatgcagtctggcttcttggacatcttcatctatctactctatcctcaagt
caaagtagagcctctgttcctactgactatagctatttgcctgaaagcagttttattgga
gcagccattggcttcttcattacaggaggaaaaaaaggtcctgaatctgtgcctccttcg
ctccttaaagtagtgatgaaacccatagcaactgttggagaaagctaccaatatcctcct
gtgaactgggctgcacttctctctccacttatgaggctaaattttggtgaagagatccag
caactgtgccttgaaattatggtgacccaggcacagtcatcccagaatgccgctgcacta
ttgggcttgtgggtgacaccaccactgatccacagtctgagtctgaataccaagagatat
ctcctgatatctgcacctctgtggataaaacacatctctgatgaacagatcctgggtttt
gttgaaaatttaatggtggcagtttttaaagcagcttccccacttagaaatcctgagcta
tgcccaagtgctttacagggtctgagccaggccatgaaactgcccagccctgcccaccac
ctctggagtctgctctctgaagctactgggaaaatttttgacctcctgccaaataagatt
cggagaaaggatctagagctgtatatcagcatagcaaaatgcctcttagaaatgacagat
gatgatgccaatcggatcacccaggttactaagagcaacatagaaaaggctgcctttgtc
aaactgtacttagtctctcaaggacgattccccttggtgaacctgaccgatatgctgagt
gttgctgtgcagcactgtgagaaagaggtgttggcctggatgtttctgcacagcttatac
caggcacggattgtgagccatgccaacacgggcattttgaagagaatggagtggctcttg
gaactgatgggttatattagaaatgttgcttaccagtcaacatcctttcagaatacggct
cttgacgaggctttggacttcttcttgctgatatttgcaaccgcagtggttgcatgggcc
gaccacacttcccctctcctcctcggtctcagtgccagctggttgccatggcatcaggag
aatggcccagctgggccagtaccaagcttccttggcaggagtccaatgcacagggtcact
ctgcaggaggttctcactctccttcccaatagcatggctctgctgctgcagaaagagcca
tggaaggaacagacccagaagttcattgactggctattcagcatcatggaaagccctaaa
gaagccctctcagcaaagtccagggatcttttgaaagccaccctgctgtccttgagagtt
ctcccagagtttaagaagaaagctgtatggaccagagcgtatggttggtga
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