Nomascus leucogenys (northern white-cheeked gibbon): 100589622
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Entry
100589622 CDS
T03265
Symbol
SPG11
Name
(RefSeq) spatacsin isoform X3
KO
K19026
spatacsin
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle05014
Amyotrophic lateral sclerosis
nle05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100589622 (SPG11)
05022 Pathways of neurodegeneration - multiple diseases
100589622 (SPG11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nle03400
]
100589622 (SPG11)
DNA repair and recombination proteins [BR:
nle03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
100589622 (SPG11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
100589622
NCBI-ProteinID:
XP_003266887
Ensembl:
ENSNLEG00000005591
UniProt:
A0A2I3GPL7
LinkDB
All DBs
Position
6:56686618..56806042
Genome browser
AA seq
2443 aa
AA seq
DB search
MAAEEGVASAASAGGSWGAAAMGRVLPMLLVPVPAEAMGQLGSRAQLHAQQEALGSLTAA
GSLQVLSLALGSRGGGRCCLEGPFWHFIWEDSRNSSTPTEKPKLLALGENYELLIYEFNL
EDGRCDATILFSCSGEALQKLIEDQDISISLLSLRILSFHNNTSLLFINKCIILHIVFPE
RDAAIRVLNCFTLPLPAQAVDMIIDTQLCRGILFVLSSLGWIYVFDVVDGTYVAHVDLAL
HKEDMCNEQQQEPAKISSFTSLKVSQDLDVVVIVSSSNSAVALNLNLYFRQHPGHLLCER
ILEDLPIQGPKGIDEDDPVNSAYNMKLTKFSFQIDRSWKAQLSSLNETIKNSKLEVSCCA
PWFQDILHWESPESGNHSTSVQSWAFIPQDIMHGQYNVLQKDHAKTSDPGRSWEIMHISE
QEEPIELKCVSVTGFTALFIWEVERMGYTITLWDLETQDMQCFSLGTKCIPVDSSGDRQL
CFVLTENGLSLILFGLTQEEFLNRLMIHGSASTVDTLCHLNGWGRCSIPIHALEAGIENR
QLDTVNFFLKSKENLFNPSSKSSVSDQFDRLSSHLYLRNVEELIPALDLLCSAIRESYSE
PQSKHFSEQLLNLTLSFLNNQIKELFIHTEELDEHLQKGVNILTSYINELRTFMIKFPWK
LTDAIDEYDVHENVSKVKESNIWKKLSFEEVIANAILNNKIPEAQTFFRTASHSAQKLEE
LIGIGLNLVFDNLKKSNIKEASELLKNMGFDVKGQLLKICFYTTNKNIRDFLVEILKEKN
YFSEKEKRTIDFVHQVEKLYLGHFQENMQIQSFPRYWIKEQDFFKHKSVLDSFLKYDCKD
EFNKQDHRIVLNWALWWDQLTQESILLPRISPEEYRSYSPEALWRYLTARHDWLNIILWI
GEFQTQHSYASLQQNKWPLLTIDVINQNTSCNNYMRNEILDKLARNGVFLASELEDFECF
LLRLSRIGGVIQDTLPVQNYKTKEGWDFHSQFILYCLEHSLQHLLYVYLDCYKLSPENCP
FLEKKELHEAHPWFEFLVQCRQVASNLTDPKLIFQASLANAQILIPTNQASVSSMLLEGH
TLLALATTMYSPGGVSQVVQNEENENCLKKVDPQLLKMALTPYPKLKTALFPQCTPPSVL
PSDITLYHLIQSLSPFDPSRLFGWQSANTLAIGDAWSHLPHFSSPDLVNKYAIVERLNFA
YYLHNGRPSFAFGTFLVQELIKSKTPKQLIQKVGNEAYVIGLSSFHIPSIGAACVCFLEL
LGLDSLKLRVDMKVANIILSYKCRNEDAQYSFIRESLAEKLSKLADGEKTTTEELLVLLE
EGTWNSIQQQEVKRLSSESSSQWALVVQFCRLHNMKLSISYLRECAKANDWLQFIIHSQL
HSYHPAEVKSLIQYFSPVIQDHLRLAFENLASVPTSKMDSDQACNKSPQELQGSKEEMTD
LFEILLQCPEEPASWHWLLVEAVKQQAPILSVLASCLQGASAISCLCVWMITSVEDSVAT
EAMGHIQDLTEDHTWNLEDLSVIWRTLLTRQKSKTLIRGFQLFFKDSPLLLVMEMYELCM
FFRNYKEAEAKLLEFQKSLEMLNTAATKVHPVIPAMWLEDQVCFLLKLMLQQCKTQYELG
KLLQLFVEREHLFSDGPDVKKLCVLCQILKDTSIAINHTIITSYSIENFQHECKSILERL
QTDGQFALARRVAELAELPVDNLVIKEITQEMQTLKHIEQWSLKQARIDFWKKCHENFKK
NSISSKAASSFFSTQAHVACEHPTGWSSIEERHLLLTLAGHWLAQEDVVPLDKLEELEKQ
IWLCRITQHTLGRHQEETEPKFSRQISTSSELSFDSLASEFSFSKLAALNTSKYLELNSL
PSKETCENRLDWKEQESLNFLIGRLLDDGCVHEASRVCRYFHFYNRDVALVLHCRALASG
EASMEDLHPEIHALLQSAELLEEEAPDIPLRRVHSTSSLDSQKFVTVPSSDEVVTNLEVL
TSKCLHGKNYCQQVLCLYDLAKELGCSYTDVAAQDGEAMLREILASQQPDRCKRAQAFIS
TQGLKPDTVAKLVAEEVTRELLTSSQGTGHKQMFSPTEESQTFLQLTTLCQDRTLVGMKL
LDKISSVPHGELSCTTELLILAHHCFTLTCHMEGIIRVLQAAQMLTDNHLAPSEEYGLVV
RLLTGIGRYNEMTYVFDLLHKKHYFEVLMRKKLDPSGTLKTALLDYIKRCRPGDSEKHNM
IALCFSMCREIGENHEAAARIQLKLIESQPWEDSLKDGHQLKQMLLKALTLMLDAAESYA
KDSCVRQAQHCQRLTKLITLQIHFLNTGQNTMLINLGRHKLMDCILALPRFYQASIVAEA
YDFVPDWAEILYQQVILKGDFNYLEEFKQQRLLKSSIFEEISKKYKQHQPTDMVMENLKK
LLTYCEDVYLYYKLAYEHKFYEIVNVLLKDPQTGCCLKDMLAG
NT seq
7332 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagaggagggggtcgcgagcgctgcttctgccggcggtagctggggcgccgcg
gccatggggcgggttctaccgatgctgttggtgccggtccccgccgaggcgatggggcag
ctcggctcccgggcgcagctgcacgcacagcaggaggctctggggagcctgacggctgcg
ggcagcctccaagtgctttctttggctcttggcagccggggcgggggtcgctgctgcctg
gagggccccttctggcactttatatgggaggattctcgtaacagcagcacaccaactgaa
aagcccaaactgctcgctcttggtgaaaattatgaactgcttatctatgaatttaatttg
gaagatggaagatgtgatgcaaccattttatttagctgtagtggggaggcattgcaaaag
ctcattgaagatcaagatatcagtatttccttattgtctttgagaatcctgtcatttcac
aataacacatcattattgttcatcaacaaatgtatcatcctacatattgtatttcctgaa
agagatgctgcaattagagtactcaactgtttcacgctacccttgcctgcacaggcagtg
gacatgattattgacacgcagctctgcagaggaattctttttgttttgagtagtttaggc
tggatctacgtttttgatgttgtggatggtacatatgtagctcatgtggatttagcactt
cacaaagaagatatgtgtaatgagcagcaacaggagccagccaagatttcttcatttact
tcactgaaagtttctcaagacctcgatgttgtagtgattgtcagctcctccaactctgca
gttgctcttaacttaaatttgtatttcaggcaacacccaggacacctactgtgtgaaaga
atactagaagaccttcctattcaaggacctaaggggatagatgaagatgatcctgttaac
tctgcctacaacatgaaactgaccaagttttccttccaaattgataggtcttggaaagcc
caactatcatcattgaatgaaacaataaagaactccaaactggaggtttcctgttgtgct
ccatggttccaggatattttgcattgggagtcacctgaatctggtaaccacagtacaagt
gtgcagagctgggctttcattccacaggacataatgcacgggcaatataatgttctacag
aaagatcatgccaagaccagtgatccaggaagatcatgggaaataatgcacatcagtgaa
caagaggaacccatagagcttaagtgtgtgtctgtgacaggattcactgcactgtttatt
tgggaagtggaaaggatgggctataccattaccctctgggatttggagacccaggacatg
cagtgtttttcccttggcacaaagtgtattcctgtagacagtagtggagaccggcaactg
tgctttgttttgacagagaatggactctctctgattttgtttggtttgactcaagaagag
tttttaaacagactcatgatccatggaagtgccagcactgtggacactctttgtcatctc
aatggctggggaaggtgctcaattcccatacatgcactagaggccgggatagaaaatcgt
cagctggacacagtaaatttctttttgaagagcaaggaaaatctttttaatccatcctcg
aaatcttctgtatctgatcagtttgatcgcttgtcatcccatttatatttaagaaatgtg
gaagagctgataccagcgttggatttactttgctcagcaattagagaaagttactctgaa
ccccaaagcaaacacttttcagaacaattgcttaatcttacactgtctttccttaacaac
caaataaaggagctttttattcacactgaagaactagatgaacatctgcaaaaaggagtg
aacattttgactagctacattaatgaacttcgaaccttcatgataaagtttccttggaag
ctaacagatgctatagatgaatatgatgtacatgaaaatgtctccaaagtaaaggagagc
aatatatggaagaaactcagctttgaggaagttattgccaatgccattttaaacaacaaa
ataccagaggcacaaactttcttcaggactgctagtcattctgctcaaaaacttgaggag
ctgattggcataggcttaaatttggtctttgacaatttaaaaaagagcaatataaaggaa
gcctctgaacttttgaagaatatggggtttgatgtaaaaggccaattgctcaagatatgc
ttctatacaactaataaaaacatacgtgactttttggttgaaattttaaaagaaaaaaat
tatttttctgaaaaagagaaaagaactatagacttcgtgcatcaagttgagaagctttat
ttgggacatttccaagaaaatatgcaaatccagtcatttcccaggtactggataaaggaa
caagattttttcaagcacaagtctgttttggactcattcctgaaatatgattgtaaagat
gaatttaacaaacaggaccatagaattgtgttaaattgggctctgtggtgggatcaacta
acacaagaatccatccttctccccaggataagtccagaagaatacagatcatattcccca
gaagccctctggagatacctcacagctcgccatgattggttaaacattatcttatggatt
ggagagtttcaaacccagcatagttatgcttcacttcagcagaacaaatggccccttctg
actattgatgttattaaccagaatacttcctgtaacaactacatgaggaatgaaatttta
gataagctggccaggaatggggtttttctggcatctgaactggaagactttgaatgcttc
ctcctaagactgagccgtattggaggtgtaatacaggataccctccctgttcaaaactac
aagaccaaagaaggttgggatttccattctcaattcattctctattgtttggagcacagt
ctgcagcatcttctttatgtctaccttgactgttacaaacttagtcctgaaaattgtccc
tttttggaaaaaaaagagttacatgaagcacacccttggtttgaatttttagttcagtgt
cgacaagttgccagtaatttaacagatcccaaactgatcttccaggctagccttgcaaat
gctcagattttgattcccaccaatcaggccagtgtaagcagtatgctattggaaggacat
accctcctggcccttgctactacaatgtattctcctgggggtgtcagtcaggttgttcag
aatgaagaaaatgaaaactgtttgaagaaagtggatccccagctattgaagatggcatta
actccttaccccaagctaaaaactgctctcttcccacagtgcactcctcctagtgtcctg
ccatctgatattacactctaccatcttattcagtcattatcacctttcgatcctagcaga
ttgtttggctggcagtctgctaacacactagctataggagatgcatggagtcatctccca
catttctctagccctgacctggttaataaatatgctatagtggaacgtctgaattttgct
tattatttacataatggacggccatcatttgcatttggtacttttctggtccaggaatta
atcaagagcaagactcccaagcagctgatccagaaagtaggcaatgaagcctatgttata
gggctctcctccttccacataccttcaataggagctgcatgtgtttgtttcttagaattg
cttggccttgacagcctcaagctcagagttgatatgaaagtggccaatataattttgagc
tacaagtgcagaaatgaagatgctcagtacagctttatcagagagtctctagccgaaaaa
ctatctaaactagctgatggtgaaaagacaaccacagaagaattgcttgttctcttagaa
gaaggtacatggaacagcattcagcaacaggaagtaaagaggttatccagtgaatctagc
agccaatgggcattagtggtacagttctgcaggctacacaatatgaaactaagcatatct
taccttagagaatgtgccaaagcaaatgattggctgcagttcattattcacagccaactc
cacagctaccacccagcagaggtgaaatcccttatccagtacttcagcccagtcattcaa
gaccacttaaggctggcttttgagaacttggcctcagtgcccacctccaaaatggacagc
gatcaagcctgcaataagtccccccaggaacttcaaggaagcaaagaagagatgaccgat
ttatttgaaattctgctccaatgcccagaggagccagcctcctggcactggcttctggtt
gaagcagtgaaacaacaggcccctatcctcagtgttctggcctcatgtctccagggtgcc
agtgccatttcttgtctctgtgtttggatgatcacttctgtggaggacagtgttgcaact
gaagcaatgggacacattcaggacttgacagaggaccatacctggaaccttgaggatctt
tcagtcatctggagaacattattaacaagacagaagagcaaaactctcatcagaggtttc
caacttttctttaaggattccccgttactactggtgatggagatgtatgaactgtgtatg
ttcttcaggaattataaagaagctgaagctaaacttctggagtttcagaagagccttgaa
atgcttaacacagcagccacaaaggtccaccctgtcatccctgccatgtggctggaggat
caggtgtgtttccttttgaagcttatgctacagcagtgtaagacccagtatgagctgggg
aagcttttacagctctttgttgaaagagagcatctcttctctgatggtccagatgtgaaa
aagctttgtgtcctttgccaaattttgaaggatacatccatagccattaatcatacaatt
attaccagctacagcattgagaattttcagcatgaatgtaaatctattttggaaagactg
cagacagatggacaattcgctttggccaggagggtagcagaattagctgagttacctgtg
gacaacttggttattaaagagataacacaggaaatgcagaccctaaaacacattgaacag
tggtcactaaaacaagcaagaattgacttctggaaaaaatgccatgagaattttaagaaa
aattcaatttcaagcaaagcagcttcttcctttttctcaacccaggcccatgtggcatgc
gagcacccaactggatggagcagcattgaggagcgccatctgctgctcaccttggcaggg
cactggcttgcccaggaggacgtggtgcccttggacaagctggaggagctggagaagcag
atctggctctgccgcatcacccagcacactcttggaagacatcaggaagaaacagagccc
aaattttctcgacagatctcaactagtagtgaactttcttttgatagtttagccagtgag
ttttccttctccaagctggctgctctgaacacatcaaaatacttagaacttaacagcctt
ccatccaaagagacatgcgagaatagactggattggaaagagcaggagtcactaaacttt
ttgattgggcgcctactggacgatggctgtgtgcatgaggcaagtagagtatgccggtat
tttcatttttataatcgagatgtcgccttggtattgcactgcagagcactggcctcaggg
gaagctagtatggaggatctgcacccggagatccatgctctcctacagagtgctgagctg
cttgaggaagaagcgcccgacattcccctacggagagtccacagcacttcaagtctggat
agtcagaagtttgtgacagtgccctccagtgatgaagtggtaactaacctggaagtgctg
acaagcaaatgcctccatgggaagaactactgtcaacaggtcctctgtctgtatgatctt
gccaaggagttgggctgttcctacacagatgttgctgctcaggatggtgaagccatgctc
cgggaaatcttggcctctcagcagcctgaccgatgcaaacgagcccaggccttcatcagc
acacagggccttaagccagatactgtggccaaactcgtggcagaagaggtgacacgggag
ctgcttacttcatcacagggaacaggacataagcagatgttcagcccaacagaggaaagc
cagacatttcttcagctgaccactctgtgtcaagaccgcacattggtaggcatgaagttg
ttggataagatttcctccgttccccatggggaactgtcttgcaccacagagctcctgatc
ctggcccatcattgcttcaccctgacgtgccacatggagggcatcatccgagtcctacag
gctgcccagatgctcacagataaccacctggccccaagtgaggagtatgggctggtggta
cggctcctcactggcattggaaggtacaatgagatgacatacgtatttgatttgctgcat
aaaaagcactactttgaagtgctaatgaggaagaagttggatccgagtggtaccctgaaa
acagccctgctggactacatcaaacgctgccgtcctggagacagtgagaagcacaatatg
attgccctgtgcttcagcatgtgccgggagattggcgagaaccacgaggcagctgcccgc
atccaactgaaattgattgagtctcagccctgggaggacagcctcaaggatgggcaccag
ctgaagcaaatgctgctgaaggccctgactctgatgctggatgcagcagagagttacgcc
aaggactcctgtgtgcgacaggcccagcactgtcagcggctcaccaagttgataactctg
cagattcactttctgaacactggccagaacacaatgctcatcaacttgggccgccacaag
ctgatggactgtattctggccctacctcggttctaccaggcttctattgtggctgaggcc
tatgattttgttccagattgggctgaaattttataccagcaagtgattcttaaaggagac
tttaattacttggaagaatttaagcagcaaaggttattaaagtccagtatatttgaagag
atttccaaaaaatataaacaacatcagcctactgacatggtcatggaaaacctgaagaaa
ttactcacatactgtgaagatgtttacctgtattacaagttggcatacgaacacaagttt
tatgaaattgtaaatgtgcttctgaaggaccctcagacaggttgctgtctaaaggacatg
ctagcaggttag
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integrated database retrieval system
