Nomascus leucogenys (northern white-cheeked gibbon): 100591405
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Entry
100591405 CDS
T03265
Symbol
ATXN2
Name
(RefSeq) ataxin-2 isoform X13
KO
K23625
ataxin 2/2L
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle05014
Amyotrophic lateral sclerosis
nle05017
Spinocerebellar ataxia
nle05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100591405 (ATXN2)
05017 Spinocerebellar ataxia
100591405 (ATXN2)
05022 Pathways of neurodegeneration - multiple diseases
100591405 (ATXN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nle03019
]
100591405 (ATXN2)
Messenger RNA biogenesis [BR:
nle03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100591405 (ATXN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
LSM
Motif
Other DBs
NCBI-GeneID:
100591405
NCBI-ProteinID:
XP_012365515
Ensembl:
ENSNLEG00000000484
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All DBs
Position
10:complement(78587633..78737549)
Genome browser
AA seq
1293 aa
AA seq
DB search
MLSAAAAPRSPAVATESRHFAAARWPGWRSLQRPGRRSGRGGGVAAPGPYPSAAPPPPGP
GPPPSRQSSPPSASDCFGSNGNGGGALRPGSRRLFGLGGPPRPFVVLLLPLASPGAPPAA
PTRASPLGARASPPRSGVSSARPAPGCPRPACEPVYGPLTMSLKPQQQQQQQQQQQQQQQ
QQQQQPPPPAAANVRKPGGSGLLASPAAAPSPSSSSVSSSSATVPSSVAAATSGGGRPGL
GRGRNSNKGLPQSTISFDGIYANMRMVHILTSVVGSKCEVQVKNGGIYEGVFKTYSPKCD
LVLDAAHEKSTESSSGPKREEIMESILFKCSDFVVVQFKDMDSSYAKRDAFTDSAISAKV
NGEHKEKDLEPWDAGELTANEELEALENDVSNGWDPNDMFRYNEENYGVVSTYDSSLSSY
TVPLERDNSEEFLKREARANQLAEEIESSAQYKARVALENDDRSEEEKYTAVQRNSSERE
GHSINTRENKYIPPGQRNREVISWGSGRQNSPRMGQPGSGSMPSRSTSHTSDFNPNSGSD
QRVVNGGVPWPSPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAH
GSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSISSGLEFVSHNPPSEAATPP
VARTSPSGGTWSSVVSGVPRLSPKTHRPRSPRQNSIGNTPSGPVLASPQAGIIPTEAVAM
PIPAASPTPASPASNRAVTPSSEAKDSRLQDQRQNSPAGNKENIKPNETSPSFSKAENKG
ISPIVSEHRKQIDDLKKFKNDFRLQPSSTSESMDQLLNKNREGEKSRDLIKDKIEPSAKD
SFIENSSSNCTSGSSKPNSPSISPSILSNTEHKRGPEVTSQGVQTSSPACKQEKDDKEEK
KDAAEQVRKSTLNPNAKEFNPRSFSQPKPSTTPTSPRPQAQPSPSMVGHQQPTPVYTQPV
CFAPNMMYPVPVSPGVQPLYPIPMTPMPVNQAKTYRAVPNMPQQRQDQHHQSAMMHPASA
AGPPIAATPPAYSTQYVAYSPQQFPNQPLVQHVPHYQSQHPHVYSPVIQGNARMMAPPTH
AQPGLVSSSATQYGAHEQTHAMYVSTGSLAQQYAHPNATLHPHTPHPQPSATPTGQQQSQ
HGGSHPAPSPVQHHQHQAAQALHLASPQQQSAIYHAGLAPTPPSMTPASNTQSPQNSFPA
AQQTVFTIHPSHVQPAYTNPPHMAHVPQAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQAA
LAQSALQPIPVSTTAHFPYMTHPSVQAHHQQQL
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgctctcagcggccgcagctcctcggagtcccgcggtggccaccgagtctcgccacttc
gccgcagccaggtggcccgggtggcgctcgctccagcggccggggcggcggagcgggcgg
ggcggcggtgtcgcggccccaggaccgtatccctccgccgcccctcccccgcccggcccc
ggcccccctccctcccggcagagctcgcctccctccgcctcagactgttttggtagcaac
ggcaacggcggtggtgcgctccggcccgggtcccggcggctctttggtctcggcgggcct
ccccgccccttcgtcgttctccttctccccctcgccagcccgggcgcccctccggccgcg
ccaacccgcgcctccccgctcggcgcccgcgcgtccccgccgcgctccggcgtctcctcg
gcgcgcccggctcccggctgtccccgcccggcgtgcgagccggtgtatgggcctctcacc
atgtcgctgaagccccagcagcagcagcagcagcagcagcagcagcagcagcagcagcag
cagcagcagcagcagccgccgccgcctgcggctgccaatgtccgcaagcccggcggcagc
ggccttctagcgtcgcccgccgccgcaccttcgccgtcctcgtcctcggtctcctcgtcc
tcggccacggttccctcctcggtggccgcggcgacctccggcggcgggaggcccggcctg
ggcagaggtcgaaacagtaacaaaggactgcctcagtctacgatttcttttgacggaatc
tatgcaaatatgaggatggttcatatacttacatcagttgttggctccaaatgtgaagta
caagtgaaaaatggaggtatatatgaaggagtttttaaaacttacagtccgaagtgtgat
ttggtacttgatgccgcacatgagaaaagtacagaatccagttcggggccgaaacgtgaa
gaaataatggagagtattttgttcaaatgttcagactttgttgtggtacagtttaaagat
atggactccagttatgcaaaaagagatgcttttactgactctgctatcagtgctaaagtg
aatggcgaacacaaagagaaggacctggagccctgggatgcaggtgaactcacagccaat
gaggaacttgaggctttggaaaatgacgtatctaatggatgggatcccaatgatatgttt
cgatataatgaagaaaattatggtgtagtgtctacgtatgatagcagtttatcttcatat
acggtgcccttagaaagagataactcagaagaatttttaaaacgggaagcaagggcaaac
cagttagcagaagaaattgagtcaagtgcccagtacaaagctcgagtggccctggaaaat
gatgataggagtgaggaagaaaaatacacagcagttcagagaaattccagtgaacgtgag
gggcacagcataaacactagggaaaataaatatattcctcctggacaaagaaatagagaa
gtcatatcctggggaagtgggagacagaattcaccgcgtatgggccagcctggatcgggc
tccatgccatcaagatccacttctcacacttcagatttcaacccgaattctggttcagac
caaagagtagttaatggaggtgttccctggccatcgccttgcccatctccttcctctcgc
ccaccttctcgctaccagtcaggtcccaactctcttccacctcgggcagccacccctaca
cggccgccctccaggcccccctcgcggccatccagacccccgtctcacccctctgctcat
ggttctccagctcctgtctctactatgcctaaacgcatgtcttcagaagggcctccaagg
atgtccccaaaggcccagcgacatcctcgaaatcacagagtttctgctgggaggggttcc
atatccagtggcctagaatttgtatcccacaacccacccagtgaagcagctactcctcca
gtagcaaggaccagtccctcggggggaacgtggtcatcagtggtcagtggggttccaaga
ttatcccctaaaactcatagacccaggtctcccagacagaacagtattggaaataccccc
agtgggccagttcttgcttctccccaagctggtattattccaactgaagctgttgccatg
cctattccagccgcatctcctacgcctgctagtcctgcatcgaacagagctgttacccct
tctagtgaggctaaagattccaggcttcaagatcagaggcagaactctcctgcagggaat
aaagaaaatattaagcccaatgaaacatcacctagcttctcaaaagctgaaaacaaaggt
atatcaccaattgtttctgaacatagaaaacagattgatgatttaaagaaatttaagaat
gattttaggttacagccaagttctacttctgaatctatggatcaactactaaacaaaaat
agagagggagaaaaatcaagagatttgatcaaagacaaaattgaaccaagtgctaaggat
tctttcattgaaaatagcagcagcaactgtaccagtggcagcagcaagccgaatagcccc
agcatttccccttcaatacttagtaacacggagcacaagaggggacctgaggtcacttcc
caaggggttcagacttccagcccagcatgtaaacaagagaaagatgataaggaagagaag
aaagacgcagctgagcaagttaggaaatcaacattgaatcccaatgcaaaggagttcaac
ccacgttccttctctcagccaaagccttctactaccccaacttcacctcggcctcaagca
caacctagcccatctatggtgggtcatcaacagccaactccagtttatactcagcctgtt
tgttttgcaccaaatatgatgtatccagtcccagtgagcccaggcgtgcaacctttatac
ccaatacctatgacgcccatgccagtgaatcaagccaagacatatagagcagtaccaaat
atgccccaacagcggcaagaccagcatcatcagagtgccatgatgcacccagcgtcagca
gcgggcccaccaattgcagccaccccaccagcttactccacgcaatatgttgcctacagt
cctcagcagttcccaaatcagccccttgttcagcatgtgccacattatcagtctcagcat
cctcatgtctatagtcctgtaatacagggtaatgctagaatgatggcaccaccaacacat
gcccagcctggtttagtatcttcttcagcaactcagtacggggctcatgagcagacgcat
gcgatgtatgtttccacgggctcccttgctcagcagtatgcgcaccctaacgctaccctg
cacccacatactccacaccctcagccttcagctacccccactggacagcagcaaagccaa
catggtggaagtcatcctgcacccagtcctgttcagcaccatcagcaccaggccgcccag
gctctccatctggccagtccacagcagcagtcagccatttaccacgcggggcttgcgcca
actccaccctccatgacacctgcctccaacacgcagtcgccacagaatagtttcccagca
gcacaacagaccgtctttacgatccatccttctcacgttcagccggcgtataccaaccca
ccccacatggcccacgtacctcaggctcatgtacagtcaggaatggttccttctcatcca
actgcccatgcgccaatgatgctaatgacgacacagccacccggcggtccccaggccgcc
ctcgctcaaagtgcactacagcccattccagtctcgacaacagcgcatttcccctatatg
acgcacccttcagtacaagcccaccaccaacagcagttgtaa
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