Entry |
|
Symbol |
SMARCD1
|
Name |
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
|
KO |
K11650 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D |
|
Organism |
nle Nomascus leucogenys (northern white-cheeked gibbon)
|
Pathway |
nle03082 | ATP-dependent chromatin remodeling |
|
Brite |
KEGG Orthology (KO) [BR:nle00001]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100594491 (SMARCD1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100594491 (SMARCD1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100594491 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:nle03021]
100594491 (SMARCD1)
03036 Chromosome and associated proteins [BR:nle03036]
100594491 (SMARCD1)
Transcription machinery [BR:nle03021]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100594491 (SMARCD1)
Chromosome and associated proteins [BR:nle03036]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100594491 (SMARCD1)
PBAF complex
100594491 (SMARCD1)
GBAF(ncBAF) complex
100594491 (SMARCD1)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
8:complement(2060660..2076495)
|
AA seq |
515 aa
MAARAGFQSVAPSGGAGASGGAGAAAALGPGGTPGPPVRMGPAPGQGLYRSPMPGAAYPR
PGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSRKRPAPQQIQQVQQQAVQNRN
HNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKR
KLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPR
LARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQR
LHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIATL
DNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAE
FYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT |
NT seq |
1548 nt +upstreamnt +downstreamnt
atggcggcccgggcgggtttccagtctgtggctccgagcggcggcgccggagcctcagga
ggggcgggcgcggctgctgccttgggcccgggcggaactccggggcctcccgtgcgaatg
ggcccggctccgggtcaagggctgtaccgctccccgatgcccggagcggcctatccgaga
ccaggtatgttgccaggcagccgaatgacacctcagggaccttccatgggaccccctggc
tatggggggaacccttcagtccgacctggcctggcccagtcagggatggatcagtcccgc
aagagacctgcccctcagcagatccagcaggtccagcagcaggcggtccaaaatcgaaac
cacaatgcaaagaaaaagaagatggctgacaaaattctacctcaaaggattcgtgaactg
gtaccagaatcccaggcctatatggatctcttggcttttgaaaggaaactggaccagact
atcatgaggaaacggctagatatccaagaggccttgaaacgtcccatcaagcaaaaacgg
aagctgcgaattttcatttctaacactttcaatccggctaagtcagatgccgaggatggg
gaagggacggtggcttcctgggagcttcgggtagaaggacggctcctggaggattcagcc
ttgtccaaatatgatgccactaaacaaaagaggaagttctcttccttttttaagtccttg
gtgattgaactggacaaagacctgtatgggccagacaaccatctggtagaatggcacagg
accgccactacccaggagaccgatggctttcaggtgaagcggccgggagacgtgaatgta
cggtgtactgtcctactgatgctggattaccagcctccccagtttaaattagacccccgc
ctagctcgactcctgggcatccatacccagactcgtccagtgatcatccaagcactgtgg
caatatattaagacacataagctccaggaccctcatgagcgggagtttgtcatctgtgac
aagtacctgcagcagatctttgagtctcaacgtatgaagttttcagagatccctcagcgg
ctccatgccttgcttatgccaccagaacctatcatcattaatcatgtcatcagtgttgac
ccgaatgatcagaaaaagacagcttgttatgacattgatgttgaagtggatgacaccttg
aagacccagatgaattcttttctgctgtccactgccagccaacaggagattgctactcta
gacaacaagatccatgagacgatagaaaccatcaaccagctgaagactcagcgggagttc
atgctgagctttgccagagaccctcagggcttcatcaatgactggcttcagtcccagtgc
agggacctcaagacaatgactgatgtggtgggtaacccagaggaggagcgccgagctgag
ttctacttccagccctgggctcaggaggctgtgtgccgatacttctactccaaggtgcag
cagagacgacaagaattagagcaagccctgggaatccggaatacatag |