Nomascus leucogenys (northern white-cheeked gibbon): 100595991
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Entry
100595991 CDS
T03265
Symbol
SLX4
Name
(RefSeq) structure-specific endonuclease subunit SLX4 isoform X1
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
100595991 (SLX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nle04121
]
100595991 (SLX4)
03400 DNA repair and recombination proteins [BR:
nle03400
]
100595991 (SLX4)
Ubiquitin system [BR:
nle04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
100595991 (SLX4)
DNA repair and recombination proteins [BR:
nle03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
100595991 (SLX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slx4
BTB
Motif
Other DBs
NCBI-GeneID:
100595991
NCBI-ProteinID:
XP_030655044
Ensembl:
ENSNLEG00000009686
LinkDB
All DBs
Position
18:99501727..99532190
Genome browser
AA seq
1836 aa
AA seq
DB search
MKLSVNETQLGFYLGSLSHLSARPGIDPRSSEDQPESLKTHQMMDESDEDFKKLCASFFQ
RVKKHGIKEVSGERKTQKAASDGTQIRSKLKRTKQTATKTKTLQGPAEKKLPSGSQASKT
KKQGVTKWQASEPALSVNGDGSVLASAPDQPVLWETAQNTQTGNWQEPSPKLSREKTREK
VPNSDSQPPPSCLTTAVPSPSKPRTAQLVLQRMQQFKRADPERLRHASEECSLEAAREEN
VPKDPQEEMMAGNVYGLGPPAPESDAAVALTLQQEFARVGASAHDDSLEEKGLFFCQICQ
KNLSSMNVTRREQHVNRCLDEAEKTLRPSVPQIPECPICGKPFLTLKSRTSHLKQCAVKM
EVGPQLLLQAVRLQTAQPEGSSSPPVSSDHGGGLKRRGPTSKKQPRKRRKVDEVPSEDLL
VAMALSRSEMEPCVAVPALRLESAFSERMRPKAEKKSRKKKPPASPPLLLVQDSETTGRQ
IEDRVALLLSEEVELSSTPPLPASRILKEGWERAGQCPPPPERKQSFLWEGSALTGAWAM
EAFYTARLVPPLVPQRPAQGLMQEPVPPLVPPEHSEPGERRSPALHGTPTAGCGSRGPSP
SASQREHQALQDLVDLAREGLSASPWPGSGGLAGSEGTAGLDVVPGGLPLTGFVVPSQDK
HPDRGGRTSLSLGLLVADFGAMVNNPHLSDIQFQTDSGEVLYAHKFVLYARCPLLIQYVN
NEGFSAVEDGVLTQRVLLGDVSTEAARTFLHYLYTADTGLPPGLSSELSSLAHRFGVSEL
VHLCEQVPIATDSEGKPWEEKEAENCESRAENFQELLRSMWADEEEEAETLLKSRDHEED
QENVNEAEMEEIYEFAATQRKLLQEERAAGAGEDADWLEGGSPVSGQLLASVQVQKQWDK
VEEMELLEPGRDEAATTWDKVGHCALPPPQGQHSGAQGAVAPEQEAPEEALGHSSCSSPS
RDCRAERKEGSLPHSDDAGDYEQLFSSTQGEISEPSQITSEPEEQSGAVRERGLEVSHRL
APWQASLPHPCCFLLGPPQGGSPRGSHHPHHTSGSSLSTPPSRGRTSQVGSPTLLSPAVP
SKQKRDRSILTLSKEPGHQKGKERRSVLECRNKGVLMFPEKSLSIDLTQSNPEHSSSISQ
KSSSKLNKEDEVILLLDSDEELELEQTKVKSISSDPLEERKAVEISPRSCELFSVIDVDA
DQEPSQSPPRREAVLQQEDEGALPENQGSLGSRGAPWLFCDRESSPSEASTTDTSWLVPA
TPLASRSRDCSSQTQISSLRSGLAVEAVTQHTPRASVGNREGNEAAQKFSVIRPQTPPPQ
TPSSCLTPVSPRTSDGRRQGHRSPSRPHPGGHPQSSPLAPHPISGDRAHFSRRFLKHSPP
GPSFLNQTTASEVVEVGDSDDEQEVASHQANSSPPLDSDPPIPTDDCCWHMEPLSPIPID
HWNLERTGPLSTSSPSRRMKEATDSCDRRSPGLLDTTPIRGSCATQRKLQEKSSGTGSPG
NSRPSFLNSALWDVWDGEEQRPPETPPPAQMLSAGGAQKPEGLETPKGANRKKNLPPKVP
ITPMPQYSIMETPVLKKELDRFGVRPLPKRQMVLKLKEIFQYTHQTLDSDSEDESQSSQP
LLQAPRCQTLTSQTYKPSRAGVHAQQEATIGPGAHRPKGPAKTKGPQHQRKHHESITPPS
RSPTKEARSGLDDDAQIPASQESVATSVDGSDSSLSSQSSSSCEFGAAFESAGEEEEGEE
EVSASQAAVQAADTDEALRCYIRSKPALYQKVLLYQPFELGELQAELKQNGLCVSSRRLL
DFLDTHCITFTTAATRREKLQGRRRQPRGKKKAERN
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgagtgtgaatgagactcagctaggcttctacttgggttcactttctcatctg
tctgcacgtcctgggattgaccctcgctcctctgaagaccagcctgaaagccttaaaact
catcagatgatggatgagtctgatgaggactttaaaaaactctgcgctagctttttccaa
agggtgaaaaaacatggaatcaaggaagtgtcaggagaaaggaaaacacaaaaggccgcc
tcagacggcactcagataagaagcaaattgaaaaggaccaaacaaactgctaccaagacc
aaaacccttcaaggccctgcagagaagaaacttccatctggcagccaggcctctaagact
aaaaagcaaggggtaaccaaatggcaagcaagtgaaccagccctctctgtgaatggggat
gggagtgtgcttgcctctgctccagatcagcctgtgctctgggaaacagcacaaaatacc
cagacgggtaactggcaagaaccgtcgccaaagctttccagagagaaaaccagagagaaa
gtgcccaacagcgactcccagcctcctccttcctgtttgacaacagcagtgccaagtccc
tccaaaccccgcacagcacaattggtcctacagcgaatgcagcagttcaagagagcagac
cccgagcgtctgagacacgcttcagaagagtgctccctcgaggctgcacgggaagaaaat
gtcccaaaggatcctcaagaggagatgatggcggggaatgtgtatgggcttgggccccct
gccccagagagcgacgctgcggtggccttgaccctgcagcaggagtttgcacgggtagga
gcatcggcacatgatgatagcctggaggaaaagggtttgttcttctgccagatttgtcaa
aagaacctctcatccatgaacgtgacccgaagggaacagcatgtgaacaggtgcttggat
gaagctgaaaagacactaagaccttccgtgcctcagatccctgagtgcccgatttgtggg
aaaccgtttcttaccttaaagagcagaaccagtcacttgaagcaatgtgctgtgaagatg
gaggttggcccccagctcctgctgcaggctgtgcggctgcagacagcacagcctgagggg
agcagcagcccgccggtgtccagtgatcacggtggaggtctgaaacggagaggacccacc
agcaagaagcagccacggaagaggcggaaggtagacgaggtaccgtccgaggacttgctg
gtggccatggctctgtcccggtcggagatggagccgtgtgtggccgtgccagcgctcagg
ctggaaagtgccttttctgagaggatgagaccaaaagcagagaagaaaagtcgcaagaag
aaacccccggcgtcccccccattgttgttagtccaggactctgaaaccacaggccgacag
atagaggaccgtgtggctctgctcctttctgaggaagtggaattatctagcacgccacca
cttcctgccagcaggattttaaaggaagggtgggaaagagcgggccagtgtcctcctcca
cctgaacgcaagcagagctttctgtgggagggcagtgcactgactggggcctgggccatg
gaggccttctacacggccaggctggtccctcctctcgtgccccagcggcctgcccagggc
ctcatgcaggagcctgtgccgccactggtgccacctgagcactcagagccgggcgagcga
aggtcacccgctctccacggcacccccactgcaggctgtggctccagggggccgtcgcct
tcggccagtcagagagagcaccaggccctgcaggacctcgtggacctggcgagggaggga
ctgagcgccagcccgtggcctggcagtgggggcctggctggctcggaagggactgcaggc
ttggacgtggtgcccggcggccttcctttgactgggtttgtggtgccgtcgcaggacaag
cacccggacaggggtggccgcacctcgctctccctcgggctgctggttgctgactttggc
gccatggtcaataacccacacctgagtgacatccagttccagacggacagcggggaggtg
ctttatgcccacaagttcgtgctttatgcccgatgcccactcctcatccagtatgtgaac
aatgaaggcttctccgctgtagaggacggggttctgacccagcgtgtcctgctgggtgac
gtgagcacggaggccgcccgcacgttcctgcactatctctacaccgcggacactggcctt
cctcctggccttagctctgagctgagctccctggcccacaggtttggcgtgagcgagctc
gttcacctgtgcgaacaggtgcctattgccacggactcagagggcaaaccgtgggaggag
aaggaagcagagaattgcgaaagcagggccgaaaatttccaggagctcttgaggtcaatg
tgggcagatgaagaggaggaagcggagactttgttgaaatccagggaccacgaagaagat
caagaaaacgtgaatgaagcagaaatggaagaaatttatgaatttgcagctactcaacga
aagctgctccaggaagaaagggcagcgggtgccggcgaggacgctgactggctggagggt
ggcagtccagtttctgggcagctcctagcaagtgtccaggtgcagaaacagtgggacaag
gtggaggagatggagctgttggagccaggaagagatgaggccgccaccacctgggacaag
gtgggacactgtgctctcccgccaccccagggccagcactcaggggcacagggagcagtg
gcccctgagcaggaggcgccagaggaggcgcttggccattccagctgctccagcccttcc
agggactgccgggcagagagaaaagaaggctcccttccgcactcagatgatgccggtgac
tacgagcagctcttctcatcaactcagggagagatctcagagccgtcccaaataacaagt
gagcctgaggaacaaagcggcgctgtcagggaaagggggctggaggtttctcatcgcctg
gctccctggcaggcgtctctaccgcacccgtgctgcttcctattggggcctccccagggc
gggagtccccgcgggtctcatcaccctcatcacacaagtgggtcgtccctgtcaacaccc
ccgtcccgcggcagaacttcccaggtgggctctccaaccttgctgtctccagctgtgcca
tcaaagcagaaaagggacaggagcatcctcacgctgtctaaagagccagggcaccagaaa
ggcaaagagcgtcggtccgtgctggagtgcagaaataagggggtcctgatgttcccagaa
aaatctctgtccattgacctaacccagtcaaatcctgagcattcgagctccatatctcag
aagtcttcatccaaactgaacaaagaagatgaggtcatcctcttactggactcggatgag
gagctggagctagaacaaaccaaagtgaagtccatttctagtgatcctctggaagaaagg
aaagctgtagaaattagccctaggtcctgtgagctgttttccgtcattgatgttgatgca
gatcaggaaccttcccagagcccaccaagaagggaagctgtgctgcagcaggaggatgag
ggggcactgccggagaatcagggctctttgggcagcagaggggctccctggctgttctgt
gaccgtgagagcagccccagcgaggccagcaccacagacacctcatggctggtgcccgcc
accccgctagccagcagaagccgcgactgttcttcccagacccaaatcagcagcctcagg
agtgggctggccgtggaggcggtgactcagcacacgcccagggcctcggtaggaaacagg
gaagggaacgaagccgctcagaagttttctgtcatcaggccccagacaccaccgccccag
acaccgtcctcatgcctcactcctgtctctccaagaacttctgacggcagaaggcaaggc
cacagaagcccttcccgtccccaccccgggggccacccgcagtcctctccactggctcca
catcccatctcaggggaccgcgcccacttcagcaggcgattcctgaaacactcgccacct
gggccaagcttcctgaaccagaccacagcaagtgaagtggtagaagtcggagacagtgac
gatgagcaggaggtggcctcccatcaggccaacagcagccccccactggacagtgacccc
ccaattccaactgacgactgctgctggcacatggagcccctctcgccaattcccattgac
cactggaacctggagcggaccggccccctgagcaccagcagccccagccgcaggatgaag
gaggccaccgacagctgtgaccgtcgctccccgggactcctggacaccacccccatccga
ggaagctgcgctacccagaggaaattgcaagagaagtcttcgggcacgggctccccgggg
aacagcaggccgagctttctgaattcggctctgtgggacgtttgggacggggaagagcag
aggcctccagagacccctcctccagcccagatgctcagcgccggtggagctcagaagccc
gaagggttagagacacccaaaggtgctaatcggaagaagaacttgcccccgaaagtgccc
ataacgccaatgccacagtattccattatggagacgccggtgctgaagaaagaactggat
aggtttggagtccgccctctgcctaaacgccaaatggttctgaagctgaaggagatattc
cagtacactcatcagaccctggactcagactctgaggacgagagccagtcctcacagccg
ctattgcaggcgcctcgctgccagaccctcacctcccagacctacaagccttcaagggca
ggggtccatgcccagcaggaagccaccataggacccggggcccataggcccaagggacct
gctaagaccaagggcccccaacatcaaaggaagcatcatgaaagcatcacacccccaagc
aggtcgcccaccaaggaggcacgttcaggcctcgatgatgacgcccagatcccagcctct
caagaatccgtggccacctctgtggatggcagtgacagctccttgagctcacagagttct
tcctcctgtgagtttggagcggcatttgagtctgcaggtgaagaggaggagggcgaggag
gaggtcagtgcctcgcaggcagccgtgcaggcggcggacacggacgaggcgctgagatgc
tacatccgctccaagccggccctgtaccagaaggtgctgctgtaccagccctttgagctg
ggggagctgcaggcagagctgaagcagaacggcctctgtgtgtcctcgcgcaggctgttg
gacttcctggacacccactgtatcaccttcaccactgccgccacccgcagggagaagctc
cagggcaggaggcggcagcctcgtggcaagaagaaggcggagcggaactga
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