Nomascus leucogenys (northern white-cheeked gibbon): 100596136
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Entry
100596136 CDS
T03265
Symbol
ERCC2
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD isoform X1
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle03022
Basal transcription factors
nle03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100596136 (ERCC2)
09124 Replication and repair
03420 Nucleotide excision repair
100596136 (ERCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nle03021
]
100596136 (ERCC2)
03036 Chromosome and associated proteins [BR:
nle03036
]
100596136 (ERCC2)
03400 DNA repair and recombination proteins [BR:
nle03400
]
100596136 (ERCC2)
Enzymes [BR:
nle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
100596136 (ERCC2)
Transcription machinery [BR:
nle03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100596136 (ERCC2)
Chromosome and associated proteins [BR:
nle03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100596136 (ERCC2)
DNA repair and recombination proteins [BR:
nle03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100596136 (ERCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
ResIII
DEAD
AAA_22
SesA
SNF2-rel_dom
nSTAND3
Motif
Other DBs
NCBI-GeneID:
100596136
NCBI-ProteinID:
XP_030652526
LinkDB
All DBs
Position
17:complement(88433257..88452915)
Genome browser
AA seq
760 aa
AA seq
DB search
MKLNVDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQ
RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPE
VTPLRFGKDVDGKCHSLTASYVRAQYQHDTSLPHCRFYEEFDAHGREVPLPAGIYNLDDL
KALGRHQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID
NVCIDSMSVNLTRRTLDRCQGNLETLQKTVLRIKETDEQRLRDEYRRLVEGLREASAARE
TDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSG
LAQRVCIQRKPLRFCAERLRSLLHTLEITDLADFSPLTLLANFATLVSTYAKGFTIIIEP
FDDRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT
FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT
SYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA
RGKVSEGIDFVHHYGRAVIMFGVPYIYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGLMVFADKRFARGDKQGKLPRWIQEHLTDANLNLTVDEGVQVAKYF
LRQMAQPFHREDQLGLSLLSLEQLESEETLQRIEQIAQQL
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaacgtggacgggctcctggtctacttcccgtacgactacatctaccccgag
cagttttcctacatgcgggagctcaaacgcacgctggacgccaagggtcatggagtcctg
gagatgccctcaggcactgggaagacagtgtccctgttggccctgatcatggcataccag
cgggcatatccgctggaggtgaccaaactcatctactgctcaagaactgtgccggagatt
gagaaggtgatcgaagagcttcgaaagttgctcaacttctatgagaagcaggagggcgag
aagctgccatttctggggctggctctgagctcccgcaaaaacttgtgtattcaccctgag
gtgacacccctgcgctttgggaaagacgtcgacgggaaatgccacagcctcacagcctcc
tatgtgcgggcgcagtaccagcatgacaccagcctgccccactgccgcttctatgaggaa
tttgacgcccatgggcgcgaggtgcccctccccgctggcatctacaacctggatgacctg
aaggccctggggcggcaccagggctggtgcccatacttccttgctcgatactcaatcctg
catgccaatgtggtggtttatagctaccactacctcctggaccccaagattgcagacctg
gtgtccaaggaactggcccgcaaggccgtcgtggtcttcgacgaggcccacaacattgac
aacgtctgcatcgactccatgagcgtcaacctcacccgccggacccttgaccggtgccag
ggcaacctggagaccctgcagaagacggtgctcaggatcaaagagacagacgagcagcgc
ctgcgggacgagtaccggcgtctggtggaggggctgcgggaggccagcgccgcccgggag
accgacgcccacctggccaaccccgtgctgcccgacgaagtgctgcaggaggcggtgcct
ggctccatccgcacggccgagcatttcctgggcttcctgcggcggctgctggagtatgtg
aagtggcggctgcgtgtgcagcatgtggtgcaggagagcccgcctgccttcctgagcggc
ctggcccagcgcgtgtgcatccagcgcaagcccctcagattctgtgctgaacgcctccgg
tccctgctgcacactctggagatcaccgaccttgctgacttctccccgctcaccctcctt
gctaactttgccacccttgtcagcacctacgccaaaggcttcaccatcatcattgagccc
tttgatgacagaaccccgaccattgccaaccccatcctgcacttcagctgcatggacgcc
tcgctggccatcaaacccgtattcgagcgtttccagtctgtcatcatcacgtctgggacg
ctgtccccgctggacatctaccccaagatcctggacttccaccctgtcaccatggcaacc
ttcaccatgacgctggcacgggtctgcctctgccctatgatcatcggccgtggcaatgac
caggtggccatcagctccaaatttgagacccgggaggatattgctgtgatccggaactat
gggaacctcctgctggagatgtctgctgtggtccccgatggcatcgtggccttcttcacc
agctaccagtacatggagagcaccgtggcctcctggtatgagcaggggatccttgagaac
atccagaggaacaagctgctctttattgagacccaggatggtgcggaaaccagtgtcgcc
ctggagaagtaccaggaggcctgcgagaacggccgcggggccatcctgctgtcagtggcc
cggggcaaagtgtccgagggaatcgactttgtgcaccactacgggcgggccgtcatcatg
tttggcgtcccctacatctacacacagagccgcattctcaaggcgcggctggaatacctg
cgggaccagttccagattcgtgagaatgactttcttaccttcgatgccatgcgccacgcg
gcccagtgtgtgggtcgggccatcaggggcaagacggactatggcctcatggtctttgcc
gacaagcggtttgcccgcggggacaagcaggggaagctgccccgctggatccaggagcac
ctcacagatgccaacctcaacctgactgtggatgagggtgtccaggtggccaagtacttc
ctgcggcagatggcacagcccttccaccgggaggatcagctgggcctgtccctgctcagc
ctggagcagctagaatcagaggagacgctgcagaggatagagcagattgctcagcagctc
tga
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