Nomascus leucogenys (northern white-cheeked gibbon): 100597928
Help
Entry
100597928 CDS
T03265
Symbol
SCAF8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nle03021
]
100597928 (SCAF8)
03041 Spliceosome [BR:
nle03041
]
100597928 (SCAF8)
Transcription machinery [BR:
nle03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100597928 (SCAF8)
Spliceosome [BR:
nle03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100597928 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
DUF3525
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
100597928
NCBI-ProteinID:
XP_030665728
LinkDB
All DBs
Position
3:140736876..140967766
Genome browser
AA seq
1292 aa
AA seq
DB search
MEAVKTFNSEDCASTPACTDCFSSSMDTRSILYSLNDYKPPISKAKMTQITKAAIKAIKF
YKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNL
YRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMAAGIPPPVVTPVLASTTTAMSNTPG
TPVTPVTPANVVQGLPDPWVSQITNTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQP
SILQALDAGLVVQLQALTAQLTAAAAAANTLTPLEQGVSFNKKLMDRFDFGEDSEHSEEP
KKELPASQLSHVSESVNNSIFHQIAEQLQQQNLEHLRQQLLEQQQPQKATPQDSQEGTFG
SEHSASPSQGSSQQHFLEPEVNLDDSIDIQQQDMDIDEGQDGVEEEVFEQEAKKVAVRSR
SRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKER
QKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCM
VHRQDAFRALQKLSSGSYKIGSKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVD
DLEGFAEGGMIDQETVNTEWETVKSSEPVKETVQTTQSPTPVEKETVVTTQAEVFPPPVA
MLQIPVAPAVPTVSLVPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPP
PVVPPPTIPPVVPTSLVQPSLSMTPETVKDVGFGSLVIPGGSVASNLATSALPAGNVFNA
PTKQAEPEEKVPHLIDHQISSGENTRSVIPNDISSNAAILGGQPPNVTSNSGILGVQRPN
VSSNSEILGVRPSNVSSSSGIIAAQPPNILNNSGILGIQPPSVSNSSGLLGVLPPHIPNN
SGLVGVQPPNVPNTSGLLGTQPPAGPQNLPPLSIPNQRMPTMPMLDIRPGLIPQAPGPRF
PLIQPGIPPQRGIPPPSVLDSALHPPPRGPFPPGDIFSQPERPFLAPGRQSVDNVTNPEK
RIPLGNDNIQQEGDRDYRFPPIETRESISRPPPVDVRDVVGRPIDPREGPGRPPLDGRDH
FGRPPVDIRENLVRPGIDHLGRRDHFGFNPEKPWGHRGDFDEREHRVLPVYGGPKGLHEE
RGRFRSGNYRFDPRSGPWNRGFGQEVHRDFDDRRRPWERQRDRDDRDFDFCREMNGNRLG
RDRIQNTWVPPPHARVFDYFEGATSQRKGDNVPQVNGENTERHAQPPPIPVQNDPELYEK
LTSSNEINKEKSDTVADIESEPVVESTETEGT
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtgaagaccttcaatagcgaggattgtgcctctactcctgcttgtacagac
tgcttttccagcagcatggacacaagaagcatattgtattccctgaatgactataaacca
cccatttcgaaagcgaaaatgacccaaattactaaggcagccatcaaagctattaagttc
tataaacatgtggtacagagtgttgagaagtttattcagaaatgtaaaccagaatacaaa
gtacctggactttatgttattgactccattgtgcgacaatcccgacatcagtttggtcaa
gaaaaggatgtgtttgcacccagatttagtaataacatcattagcactttccagaattta
tatcgttgccctggggatgacaagagtaaaatagtgagagtactaaacttatggcagaag
aataatgtatttaagagtgagattattcagcctcttttggatatggcagccgggattcca
cctccagttgtcacacctgttttggccagcactaccactgctatgagcaatactccagga
actcctgtgacacctgttactccggccaatgtggtccaaggcttacctgatccgtgggta
tctcagataacaaatacagatacacttgcagctgtggctcagatcttgcaaagtcctcaa
ggccagcagcttcaacaattaatacaaaccttacagatacaacaacagaagccccagcct
tccattctgcaagccctagatgctggtcttgttgttcagttgcaagctcttacagcacaa
cttacagctgcagctgcagctgccaacactcttactcccttagaacagggagtctccttt
aacaagaagttgatggataggtttgattttggggaagattctgagcatagtgaagaaccc
aaaaaggaacttccagcttcacaactttctcacgtttcagaatctgtgaacaattccatt
tttcatcagatagcagaacaactacaacagcaaaacctagaacatctcagacagcagctc
ttggagcagcagcagcctcaaaaggccactcctcaggatagtcaggaaggaacatttgga
tcagagcattcagcatcgccatcacaagggagtagtcagcagcattttcttgaacctgaa
gtcaatttggatgattccatagatattcagcaacaggatatggatatagatgaagggcaa
gatggagtggaagaggaggtctttgaacaagaagctaagaaagtggcggttcgctcaaga
tcaagaacacattcacgatctcgttcaagatcaccaagaaaacgaaggtctaggtcacgg
tctggctctagaaagcgtaaacacagaaagcgatcacgctcccgctcaagagaaagaaag
aggaaatcatcacggtcgtattcaagtgaaaggagagccagagaaagggagaaagaacga
cagaaaaagggattacctccaattagatctaaaacactaagtgtatgtagtactactctc
tgggttgggcaagtggacaagaaggcaacacagcaagacttaaccaacctatttgaagag
tttggacagattgaatccattaatatgattcctccccggggctgtgcttatgtctgcatg
gttcatcgacaagatgcatttcgagctcttcagaaactcagttctggatcatataaaatt
gggtccaaggtcattaagatcgcttgggctttaaacaaaggtgtaaaaacagaatacaaa
caattctgggatgtggatcttggagttacatatataccatgggaaaaagttaaagtggat
gacttggaaggttttgcagaaggaggcatgattgatcaggagactgtaaatactgagtgg
gaaactgtgaaaagctcagaacctgttaaagagacggtccagacaactcagagcccaact
ccagttgaaaaggagacagtggtcacaacccaggcagaggttttccctcctcctgttgct
atgttgcagattccagtggcgccagccgtgcctacagttagtttagtcccaccagcattt
cctgtgtcgatgccggttcctcctcctggattcagtccaatccctccacctcctttttta
agagcaagttttaacccttcacaaccaccacctggtttcatgccgcctccagttccccca
cctgttgtgccaccccctacgattccaccagtagtaccaacatctttagtgcagccgtca
ttatccatgacaccggaaactgtgaaagatgttggatttggtagccttgttataccaggc
ggttctgttgccagcaatcttgctacttccgctctgccagctggaaatgtttttaatgct
ccaactaaacaggcagagcctgaagaaaaagtacctcatcttatagaccaccagatttct
tctggtgaaaacaccagatcagtgattccaaatgatatttcaagtaatgctgcaatttta
ggaggacagccgccaaatgtgacaagcaattctggaattctgggagtccaaagaccaaat
gtatcaagtaattctgaaattcttggggtccggccatctaatgtttccagtagttctggg
attattgcagcccaaccaccaaatattctaaataactctggaatattgggaatacagcca
cccagtgtgtcaaatagttctggacttttgggagtgctacccccacatatacctaacaat
tctggacttgtaggagtacagccaccaaatgttccaaatacttctggacttctgggaaca
cagccaccagctggacctcaaaacttaccgcctttaagtatccctaatcaaaggatgccc
acaatgccaatgttagacattcgtccaggactaataccacaggcacctgggccaagattc
cctttaatacagcctggaattccaccccaacggggaatcccacccccatcggtacttgat
tcagctcttcatccaccaccccgtggaccttttcctccaggagatatttttagtcaacca
gaaagaccttttttagctcctggaagacaaagcgtagacaatgttactaacccagaaaaa
aggataccacttgggaatgataacattcaacaggaaggagatagagattaccggtttcct
cctatagaaaccagggaaagcattagtagacctccccctgtggatgttagagatgtggtt
gggcggcctatagatccaagagaaggtcctggacggcctccgctagatggtagggatcat
tttggaagacctcctgtagatataagagagaatcttgtgaggccaggtatagatcatctt
ggtcgaagagaccactttggctttaatccagagaagccctgggggcatagaggagatttt
gatgagagagagcatcgggttctaccggtctatggtggtccaaaaggcttacatgaagaa
agaggtagatttcggtctggaaactatcgatttgatcctagaagtggtccttggaaccga
ggatttggacaagaagttcacagagattttgatgaccgcagaagaccctgggagaggcaa
agggatagggatgacagagattttgatttctgcagagaaatgaatggaaatcgtcttgga
cgagacagaattcaaaacacttgggttccccctcctcatgctcgggtttttgattatttt
gaaggggccacttctcaacgaaaaggtgataatgtgcctcaggttaatggtgaaaataca
gagagacatgctcagccaccacctataccagtacagaatgatcctgaactttatgaaaaa
ctgacatcttcaaatgaaataaacaaggagaagagtgacacagttgctgatatagaaagt
gaaccagtggtagaaagcacagaaactgaggggacataa
DBGET
integrated database retrieval system
