Nomascus leucogenys (northern white-cheeked gibbon): 100598388
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Entry
100598388 CDS
T03265
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X2
KO
K12821
pre-mRNA-processing factor 40
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100598388 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nle03041
]
100598388 (PRPF40A)
Spliceosome [BR:
nle03041
]
Complex A
U1 snRNP components
U1 related factors
100598388 (PRPF40A)
Complex B
100598388 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
100598388
NCBI-ProteinID:
XP_012351918
Ensembl:
ENSNLEG00000011324
UniProt:
G1RKS8
LinkDB
All DBs
Position
17:25103710..25169596
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AA seq
928 aa
AA seq
DB search
MCSGSGRRRSSLSPTMRPGTGAERGGLMMGHPGMHYAPMGMHPMGQRANMPPVPHGMMPQ
MMPPMGGPPMGQMPGMMSSVMPGMMMSHMSQASMQPALPPGVNSMDVAAGTASGAKSMWT
EHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTKES
RWAKPKELEDLEGYQNTIVAGSLITKSNLHAMIKAEESSKQEECTTTSTAPVPTTEIPTT
MSTMAAAEAAAAVVAAAAAAAAAAAAANANASTSTSNTVSGTVPVVPEPEVTSIVATVVD
NENTVTISTEEQAQLTSTPAIQDQSVEVSSNTGEETSKQETVADFTPKKEEEDSQPAKKT
YTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQ
TEKEEKEEARSKYKEAKESFQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAISERDRLEI
YEDVLFFLSKKEKEQAKQLRKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDE
ELQNMDKEDALICFEEHIRALEKEEEEEKQKSLLRERRRQRKNRESFQIFLDELHEHGQL
HSMSSWMELYPTISSDIRFTNMLGQPGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKG
FVVEVNTTFEDFVAIISSTKRSTTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKE
SAFKSMLKQAAPPIELDAVWEDIRERFVKEPAFEDITLESERKRIFKDFMHVLEHECQHH
HSKNKKHSKKSKKHHRKRSRSRSGSDSDDDDSHSKKKRQRSESRSASEHSSSAESERSYK
KSKKHKKKSKKRRHKSDSPESDAEREKDKKEKESEKDRTRQRSESKHKSPKKKTGKDSGN
WDTSGSELSEGELEKRRRTLLEQLDDDQ
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgtgtagcggcagtggccgccggcggagcagtctgagcccgacgatgaggccggggacg
ggagctgagcgtggaggcctcatgatggggcaccctggcatgcattatgccccaatggga
atgcaccctatgggtcagagagcgaatatgcctcctgtacctcatggaatgatgccgcag
atgatgccccctatgggagggccaccaatgggacaaatgcctggaatgatgtcgtcagta
atgcctggaatgatgatgtctcatatgtctcaggcttccatgcagcctgccttaccgcca
ggagtaaatagtatggatgtagcagcaggtacagcatctggtgcaaaatcaatgtggact
gaacataaatcacctgatggaaggacttactactacaacactgaaaccaaacagtctacc
tgggagaaaccagatgatcttaaaacacctgctgagcaactcttatctaaatgcccctgg
aaggaatacaaatcagattctggaaagccttactattataattctcaaacaaaagaatct
cgctgggccaaacctaaagaacttgaggatcttgaaggataccagaataccattgttgct
ggaagtcttattacaaaatcaaacctgcatgcaatgatcaaagctgaagaaagcagtaag
caagaagagtgtaccacaacatcaacagccccagtccctacaacagaaattccgaccaca
atgagcaccatggctgctgcagaagcagcagctgctgttgttgcagcagcagcagcggca
gcagcagcagcagctgcagccaatgctaatgcttccacttctacttctaatactgtcagt
ggaactgttccagttgttcctgagcctgaagttacttccattgttgctactgttgtagat
aatgagaatacagtaactatttcaactgaggaacaagcacaacttactagtacccctgct
attcaggatcaaagtgtggaagtatccagtaatactggagaagaaacatctaagcaagaa
actgtagctgattttactcccaaaaaagaagaggaggacagccaaccagcaaagaaaaca
tacacttggaatacaaaggaagaggcaaagcaagcttttaaagaattattgaaagaaaag
cgggtaccatcgaatgcttcatgggagcaagctatgaaaatgattattaatgatccacga
tacagtgctttggcaaagttaagtgaaaaaaagcaagcctttaatgcctataaagtccag
acagaaaaagaagaaaaagaagaagcaagatcaaagtacaaagaggctaaggaatccttt
cagcgttttcttgaaaatcatgagaaaatgacttctacaaccagatacaaaaaagcagag
caaatgtttggagagatggaagtttggaatgcaatatcagaacgtgatcgtcttgaaatc
tatgaagatgttttgttctttctttcaaaaaaagaaaaggaacaagcaaagcagttgcga
aagagaaattgggaagccttaaaaaacatacttgacaacatggctaatgtaacatactct
accacttggtctgaagcccagcagtatctgatggataatccaacttttgcagaagatgag
gagttacaaaatatggacaaagaagatgcattaatttgctttgaagaacacattcgggct
ttagaaaaggaggaagaagaagaaaaacagaagagtttgctgagagaaaggagacgacag
cgaaaaaatagggaatctttccagatatttttagatgaattacatgaacatggacaacta
cattctatgtcatcttggatggaattgtatccaactattagttctgatattagattcact
aatatgcttggtcagcctggatcaactgcacttgatcttttcaagttttatgttgaggat
cttaaagcacgttatcatgatgagaagaagataataaaagacattctaaaggataaagga
tttgtagttgaagtaaatactacttttgaagattttgtggcaataatcagttcaactaaa
agatcaactacattagatgctggaaacatcaaattggctttcaatagtttactagaaaag
gcagaagcccgtgaacgtgaaagagaaaaagaagaggctcggaagatgaaacgaaaagaa
tctgcatttaagagtatgttaaaacaagctgctcctccgatagaattggatgctgtctgg
gaagatatccgtgagagatttgtaaaagagccagcatttgaggacataactctagaatct
gaaagaaaacgaatatttaaagattttatgcatgtgcttgagcatgaatgtcagcatcat
cattcaaagaacaagaaacattctaagaaatctaaaaaacatcataggaaacgttcccgc
tctcgatcggggtcagattccgatgatgatgatagccattcaaagaaaaaaagacaacga
tcagagtctcgttctgcttcagaacattcttctagtgcagagtctgagagaagttataaa
aagtcaaaaaagcataagaagaaaagtaagaagaggagacataaatctgactctccagaa
tccgatgctgagcgagagaaggataaaaaagaaaaagaaagtgaaaaagacagaactaga
caaagatcagaatcaaaacacaaatcgcctaagaaaaagactggaaaggattctggtaat
tgggatacttctggcagtgaactgagcgaaggggaattggaaaagcgcagaagaaccctt
ttggagcaactggatgatgatcaataa
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