Nomascus leucogenys (northern white-cheeked gibbon): 100598848
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Entry
100598848 CDS
T03265
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
KO
K06237
collagen type IV alpha
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle04151
PI3K-Akt signaling pathway
nle04382
Cornified envelope formation
nle04510
Focal adhesion
nle04512
ECM-receptor interaction
nle04820
Cytoskeleton in muscle cells
nle04926
Relaxin signaling pathway
nle04933
AGE-RAGE signaling pathway in diabetic complications
nle04974
Protein digestion and absorption
nle05146
Amoebiasis
nle05165
Human papillomavirus infection
nle05200
Pathways in cancer
nle05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100598848 (COL4A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100598848 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100598848 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100598848 (COL4A3)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
100598848 (COL4A3)
09154 Digestive system
04974 Protein digestion and absorption
100598848 (COL4A3)
09158 Development and regeneration
04382 Cornified envelope formation
100598848 (COL4A3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100598848 (COL4A3)
09162 Cancer: specific types
05222 Small cell lung cancer
100598848 (COL4A3)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100598848 (COL4A3)
09174 Infectious disease: parasitic
05146 Amoebiasis
100598848 (COL4A3)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
100598848 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nle04147
]
100598848 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
nle00536
]
100598848 (COL4A3)
Exosome [BR:
nle04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
100598848 (COL4A3)
Glycosaminoglycan binding proteins [BR:
nle00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100598848 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
100598848
NCBI-ProteinID:
XP_030658174
Ensembl:
ENSNLEG00000027156
LinkDB
All DBs
Position
22a:127877052..127967894
Genome browser
AA seq
1654 aa
AA seq
DB search
MESVALPPSASGSGCVCKDKGQCFCDGAKGEKGEKGFPGPPGSPGQKGFTGPEGLPGPQG
PKGSPGLPGLMGSKGARGITGLPGFSGSPGLPGTPGNTGPYGLVGVPGCNGSKGEQGFPG
LPGTPGYPGIPGAAGLKGQKGAPAKGEDIELDAKGDPGLPGAPGPQGLPGPPGFPGPVGP
PGPPGFFGFPGAMGPRGPKGHMGERVIGRKGERGVKGLTGPPGPPGTVIVTLTGPDNRTD
LKGEKGDKGAMGEPGPPGPSGLPGESYGSEKGAPGDPGPQGKPGKDGVPGFPGNEGVKGN
RGFPGLMGEDGIKGQKGDIGSPGFRGPIEYYDTYQEKGDEGIPGPPGPKGTRGPQGPSGP
PGVPGSPGSSRPGLRGAPGWPGLKGTKGERGHPGKDALGTPGSPGCPGSPGLPGSPGPPG
PPGDIVFRKGPPGDHGLPGYLGSPGIPGVDGPKGEPGLLCTQCPYIPGPPGLPGLPGLHG
VKGIPGRQGAAGLKGSPGSPGNAGLPGFPGFPGAQGDPGLKGEKGETHQPEGQVGAPGDP
GLRGQPGRKGLDGIPGTPGVKGLPGPKGELALSGEKGDQGPPGDPGSPGSPGPAGPAGPP
GYGPQGEPGPQGTQGVPGAPGPPGEAGPRGELSVSTPVPGPPGPPGPPGHPGLQGPPGIP
GSMGKCGDPGLPGPDGEPGIPGIGFPGPPGPKGDQGFPGTKGSLGCPGKMGEPGLPGKPG
LPGAKGEPAVAMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPGTPGNEGLDGPRGDPGQ
PGPPGEQGPPGRCIEGPRGAQGLPGLNGLKGQQGRRGKTGPKGDPGIPGLDRSGFPGETG
SPGMPGHQGEMGPPGQKGYPGNPGILGPPGEDGVVGMMGFPGAIGPLGPPGNPGTPGQRG
NPGIPGVKGRRGTPGAKGEKGDKGNPGPSQIFRVIGDKGEPGLKGFAGNPGEKGNRGVPG
MPGLKGLKGLPGPAGPPGPRGDFGRIGNPGEPGLRGIPGSMGNMGMPGSKGKRGTLGFPG
RAGRPGLPGIHGLQGDKGEPGYSEGTRPGRPGPTGDPGLPGDMGKKGEMGQPGPPGHLGP
AGPEGAPGSPGSPGLPGKPGPHGDLGFKGIKGFLGPPGIKGPPGLPGFPGSPGPMGIRGD
QGRDGIPGPAGEKGETGLLRAPPGPRGNPGAQGAKGDRGAPGFPGLPGRKGAKGDAGPQG
PTGIEGFPGPPGLPGAIIPGQKGNHGPRGSRGSPGEPGAPGPPGSHVIGIKGDKGSMGHP
GPQGPPGTVGDMGPPGHLGAPGTPGLPGLRGDPGFQGFPGVKGEKGNPGFLGSTGPPGPI
GPKGPPGVRGDPGTLQIISLPGSPGPPGTPGEPGMQGEPGPPGPPGNLGPCGPRGKPGKD
GKPGTPGPAGEKGNKGSKGEPGPPGSDGLPGLKGKRGDSGSPATWTTRGFVFTRHSQTTA
IPSCPEGTVPLYSGFSFLFVQGNQQAHGQDLGTLGSCLQRFTTMPFLFCNVNDVCNFASR
NDYSYWLSTPALMPMNMAPITGRAIEPYISRCTVCEGPAIAIAVHSQTTDIPPCPHGWIS
LWKGFSFIMFTSAGSEGTGQALASPGSCLEEFRASPFLECHGRGTCNYYSNSYSFWLASL
NPERMFRKPIPSTVKAGELEKIISRCQVCMKKRH
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atggagagtgtagctctcccaccatcagccagtggaagcggctgtgtctgtaaagacaaa
ggccagtgcttctgtgacggggccaaaggggagaagggggaaaaaggctttcctggaccc
cccggttctcctggccagaaaggattcacgggtcctgaaggcttgcctggaccgcaggga
cccaagggctctccaggacttccaggactcatgggttccaaaggtgcaaggggaataact
ggattgccaggattttccggttctcctggacttccaggcaccccaggcaatactgggcct
tatggacttgtcggtgtaccaggatgcaatggttctaagggtgagcaggggtttccagga
ctcccagggacaccgggctacccagggatcccgggtgctgctggtttgaaaggacaaaag
ggtgctcctgctaaaggagaagatatagaacttgatgcaaaaggcgaccccgggttgcca
ggggctccaggaccccagggtttgccaggccctccaggtttccctgggcccgttggccca
cctggtcctccgggattctttggctttccaggagccatgggacctagaggacctaagggt
cacatgggtgaaagagtgataggacgaaaaggagagcggggtgtgaaagggttaacagga
cccccgggaccaccaggaacagttattgtgaccctaactggcccagataacagaacggac
ctcaagggggaaaagggagacaagggagcaatgggcgagcctggacctcctggaccctca
ggactgcctggagaatcatatggatctgaaaagggtgctcctggagaccctggcccgcag
ggaaaacccggaaaagatggtgttcctggcttccctggaaatgagggagtcaagggtaac
aggggtttccctggattaatgggtgaagatggcattaagggacagaaaggggacattggc
tctccaggatttcgtggtccaatagaatattatgacacataccaggaaaagggagatgaa
ggcattccaggcccaccagggcccaaaggaactcgtggcccacaaggtcccagtggtccc
cccggagttcctggaagtcctggatcatcaaggcctggcctcagaggagcccctggatgg
ccaggcttgaaaggaactaaaggggaacgaggccacccaggaaaggatgccctggggact
cctgggtccccaggttgtcctggttcaccaggccttccaggatcaccgggacctccagga
ccaccaggtgacatcgtttttcgcaagggtccacctggagatcacggactgccaggctat
ctagggtctccaggaatcccaggagttgacgggcccaaaggagaaccaggcctcctgtgt
acacagtgcccttatatcccagggcctcccggtctcccaggattgccagggttacatggt
gtaaaaggaatcccaggaagacaaggtgcagctggcttgaaaggaagcccagggtcccca
ggaaatgcaggtcttccaggatttccaggtttcccaggtgcccagggtgacccaggactt
aaaggagaaaaaggtgaaacgcatcagcctgaggggcaagtgggtgccccaggggacccg
gggctcagaggccaacctgggagaaagggcttggatggaattcctggaactccgggagtg
aaaggattaccaggacctaaaggcgaactggctctgagtggtgagaagggggaccaaggt
cctccaggggatcctggctcccctgggtccccaggacctgcaggaccagctggaccgcct
ggctacggaccccaaggagaacctggtcctcagggcacgcaaggagttcctggagcccct
ggaccacccggagaagccggccctaggggagaactcagtgtttcaacaccagttccaggc
ccaccaggacctccagggccccctggccatcctggcctccaaggtccacctggtatccct
ggatccatggggaaatgtggagatcctggtcttccagggcctgatggtgaaccaggaatt
ccaggaattggatttcctgggcctcctggacctaagggagaccaaggttttccaggtaca
aaaggatcactgggttgtcctggaaaaatgggagagcctgggttacctggaaagccaggc
ctcccaggagccaagggagaaccagcagtagccatgcctggaggaccaggaacaccaggt
tttccaggagaaagaggcaattctggggaacatggagaaattggactccctggacttcca
ggtctccctggaactccaggaaatgaagggcttgatggaccacgaggagatccagggcag
cctggaccacctggagaacaaggacccccaggaaggtgcatagagggtcccaggggagcc
caaggacttccaggcttaaatggattgaaagggcaacaaggcagaagaggtaaaacgggg
ccaaagggagacccaggaattccaggcttggatagatcgggatttcctggagaaactgga
tcaccaggaatgccaggtcatcaaggcgagatgggaccaccgggtcaaaaaggatatcca
ggaaatccaggaattttagggccaccaggtgaagatggagtggttgggatgatgggcttt
cctggagccattggccctctggggccccctgggaacccaggcacgccagggcagaggggg
aaccctggaattccaggagtaaagggccggagaggaaccccaggagccaagggggaaaaa
ggggataaaggaaatcccgggccttctcagatattccgcgtaataggggacaaaggagaa
ccaggtctcaaaggattcgcgggaaatccaggtgagaaaggaaacagaggtgttccaggg
atgccaggtttaaaaggcctcaaaggactacctggaccagcaggaccaccaggccccaga
ggagattttggcagaattgggaatcctggagaaccaggactacgtggtataccaggaagc
atggggaacatgggcatgccaggttctaaaggaaaaaggggaactttgggattcccaggt
cgagcaggaagaccaggcctcccaggtattcacggtctccagggagataagggagagcca
ggttattcagaaggcacaaggccaggacgaccgggaccaacgggggatccaggactaccg
ggtgatatgggaaagaaaggagaaatggggcaacctggcccacctggacatttggggcct
gctggacctgagggagcccctggaagtcctggaagtcctggcctcccaggaaagccaggt
cctcatggtgatttgggttttaaaggaatcaaaggtttcctgggccctccaggaatcaaa
ggccctccaggtcttccaggattcccaggatctcctggaccaatgggtataagaggtgac
caaggacgtgatggaattcctggtccagctggagaaaagggagaaacgggtttattgagg
gcccctccaggcccaagagggaaccctggtgctcaaggagctaaaggagacaggggagcc
ccaggttttcctggcctcccaggcagaaaaggggccaagggagatgctgggcctcaaggg
cccacaggcatagaaggattcccagggccaccaggtctgcccggtgcaattatccctggc
cagaaaggaaatcatggtccacgaggctcaagaggaagcccaggtgagcctggtgcccct
ggacctccagggagtcatgtaataggcataaaaggagacaaagggtctatgggccaccct
ggcccacaaggtccacctggaactgtaggagacatgggaccaccaggtcatctgggagca
ccaggtactccaggtcttccaggactcagaggtgatcctggattccaggggtttccaggc
gtgaaaggagaaaagggtaatcctggatttctaggatccactggacctccaggaccaatt
gggccaaaaggaccacctggtgtacgtggagaccctggcacacttcagattatctccctt
ccaggaagcccagggccacctggcacacctggagaaccagggatgcagggagaacctggg
ccaccagggccacctggaaacctaggaccctgtgggccaagaggtaagccaggcaaggat
ggaaaaccaggaactcctggaccagctggagaaaaaggcaacaaaggttctaaaggagag
ccaggaccacctggatcagatggattgccaggtttgaaaggaaaacgtggagacagtgga
tcacctgcaacctggacaacaagaggctttgtcttcacccgacacagtcaaaccacagca
attccttcatgtccagaggggacagtgccactctacagtggcttttcttttctttttgta
caaggaaatcaacaagcccacggacaagaccttggaactcttggcagctgcctgcagcga
tttaccacgatgccattcttattctgcaatgtcaatgatgtatgtaatttcgcatctcga
aatgattattcatactggctgtcaacaccagctctgatgccaatgaacatggctcccatt
actggcagggccattgagccttatataagcagatgcactgtttgtgagggtcctgcgatc
gccatagccgttcacagccaaaccactgacattcctccatgtcctcatggctggatttct
ctctggaaaggattttcattcatcatgttcacaagtgcaggttctgagggcaccgggcaa
gcactggcctcccctggctcctgcctggaagaattccgagccagcccatttctagaatgt
catggaagaggaacgtgcaactactattcaaattcctacagtttctggctggcttcatta
aacccagaaagaatgttcagaaagcctattccatcaactgtgaaagctggggaattagaa
aaaataataagtcgctgtcaggtgtgcatgaagaaaagacactga
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