Nomascus leucogenys (northern white-cheeked gibbon): 100599532
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Entry
100599532 CDS
T03265
Symbol
SYMPK
Name
(RefSeq) symplekin isoform X1
KO
K06100
symplekin
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle03015
mRNA surveillance pathway
nle04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100599532 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
100599532 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nle03021
]
100599532 (SYMPK)
03019 Messenger RNA biogenesis [BR:
nle03019
]
100599532 (SYMPK)
Transcription machinery [BR:
nle03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100599532 (SYMPK)
Messenger RNA biogenesis [BR:
nle03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
100599532 (SYMPK)
U7-dependent histone pre-mRNA processing factors
100599532 (SYMPK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
PDS5
Cnd1
Cohesin_HEAT
Motif
Other DBs
NCBI-GeneID:
100599532
NCBI-ProteinID:
XP_030653175
Ensembl:
ENSNLEG00000002369
LinkDB
All DBs
Position
17:complement(88892447..88940700)
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AA seq
1273 aa
AA seq
DB search
MASGSGDSVTRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQAALITNDSKITVLKQVQE
LIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD
ENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAGDIILLLDSDNDGIR
THAIKFVEGLIVTLSPRMADSEIPRRQEHDISLDRIPRDHPYIQYNVLWEEGKAALEQLL
KFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKN
LKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEIARNMPSSKDTRKRPRDDSDSTLKKM
KLEPNLGEDDEDKDLEPGPSGTSKASAQISGQSDTDITAEFLQPLLTPDNVANLVLISMV
YLPEAMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQCKEEPKEEK
VVKTESVLIKRRLSAQGQAISVVGSLSSMSPLEEEAPQAKRRPEPIIPVTQPRLAGAGGR
KKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRIKILASLVTQFNSGL
KAEVLSFILEDVRARLDLAFAWLYQEYNAYLAAGASGSLDKYEDCLIRLLSGLQEKPDQK
DGIFTKVVLEAPLITESALEVVRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDL
SSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAA
PWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPE
LLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEK
KEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSVKCDMK
SIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNIL
SRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVR
SFTPHQQAHIPNSIMTILEASGKQEPEAKEAPAGPLEEDDLEPLALAPAPAPRPPQDLIG
LRLAQEKALKRQLEEEQKLKPGGVGAPSSSSSPSPSARPGPPPSEEAMDFREEGPECETP
GIFISMDDDSGLTEAALLDSSLEGPLPKETAAGGLTLKEERSPQTLAPIGEDAVKTPSPV
AEDAREPEAKGNS
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcggcagtggggacagcgtcacccgccggagcgtggcatcacagtttttcact
caagaggaggggccgggcatcgatggcatgaccacctcagagagggtggtggatcttctg
aaccaggcggcgctgatcaccaatgactcaaagatcacagtgctcaaacaggtccaggag
ctgataatcaacaaagaccccacactactggacaacttcctggacgagatcatcgcattc
caagcagacaagtcaattgaagtgcgaaaatttgtcatcggcttcatcgaggaggcatgc
aagcgagacattgagttgctgctgaaactcattgcaaacctcaacatgctcttgagggat
gagaatgtgaacgtagtgaagaaggccatcctcaccatgacccagctctacaaggtggcc
ctgcagtggatggtgaagtcacgggtcattagcgagctacaggaggcctgctgggacatg
gtatctgccatggcgggggacatcatcctgctgttggactctgacaatgatggcatccgc
acccacgccatcaagtttgtggagggcctcattgtcactctgtcaccccgcatggctgac
tcagagataccccgacgccaggagcatgatatcagcctggaccgcatccctcgtgaccac
ccctacatccagtacaatgtgctatgggaagagggcaaggcagccttggagcagctgctt
aagttcatggtgcaccctgccatctcctccatcaacctgaccacagcgctgggctccctc
gccaatatcgcccgccagagacccatgttcatgtctgaggtgatccaggcctatgaaact
ctgcatgccaacctgcccccaacgctggccaaatcgcaggtgagcagcgtgcgtaagaat
ctgaagctgcacctgttgagtgtgctgaagcacccggcttccttggagttccaggcccag
atcaccaccctgctggtggacctgggcacacctcaggctgagatcgcccgcaacatgccg
agcagcaaggacacccgcaagcggccccgcgatgactcggactctacactcaagaagatg
aagctggagcccaacctaggggaggatgatgaggacaaggacttggagccaggcccatcg
gggacctcgaaggcctcggcgcagatctccggccagtcagacacggacatcacagctgag
ttcctgcagcctctgctgacgcctgataatgtggctaatctggtcctcatcagcatggtg
tacctgcccgaggccatgccagcctccttccaggccatctacacccccgtggagtcagca
ggcacggaagcccagatcaagcacctggctcggctcatggccacacagatgacagctgcc
ggactgggaccaggtgtagagcagaccaaacagtgcaaggaggagcccaaggaggagaag
gtggtgaagacggagagcgtcctgatcaagcggcgcctgtcagcccagggccaagccatc
tcggtggtgggttccctgagctccatgtcccctctggaggaagaggcaccgcaggccaaa
aggaggccagagcccattatccctgtcactcagccccggctggcaggcgccggtgggcgc
aagaaaattttccgtctcagcgacgtgctgaagccccttactgatgcccaggtggaagcc
atgaagctgggcgctgtgaagcggatcctgcgggctgagaaggctgtggcctgcagcggg
gcagcccaggtccgcataaagatcctggccagcctggtgacacagttcaactcaggcctg
aaggcggaggtcttgtccttcatcctggaggatgtgcgggcccgcctggatctggccttc
gcctggctctaccaggagtacaacgcctacctggctgcgggtgcctcgggctccctggac
aagtatgaggactgcctcatccgcctgctctctggcctgcaggagaaaccagaccagaag
gatgggatcttcaccaaggttgtgctggaggcgccactcatcacagagagtgccctggag
gtggtccgcaagtactgcgaggatgagagtcgcacctatctgggcatgtccacgcttcga
gacctgatcttcaagcgcccatcccgccagttccagtacctgcatgtcctccttgacctc
agctcccatgagaaggacaaggtgcgctcccaggccctgctgttcatcaaacgcatgtat
gagaaggagcagctgcgggagtatgtggagaaatttgccctcaactacctgcagctcctg
gtgcaccccaacccaccgtctgtgctgtttggagctgacaaggacacagaggtggcagca
ccctggacggaggagacagtgaagcagtgtctctacctctacctggccctcctgcctcag
aaccacaagctgatccatgagctggcggccgtgtacactgaagccatcgccgacatcaag
cggacggtgctgagggtcattgagcagccgatccgaggaatgggcatgaactccccggag
ctgctcctgctggtggaaaattgtcctaagggggcagagacactggtcacgcgatgtctg
catagcctcacagacaaagtgccaccctccccggagctggtgaagcgggtccgggatctc
taccacaagcgactgccagacgtccgcttcctcatcccggtgctcaatgggctggagaag
aaagaggtgatccaggccctgcctaaactcatcaaactcaaccccatcgtggtgaaggaa
gtcttcaaccgcctgctgggcacccagcatggtgagggaaactcggccttgtccccgctg
aaccctggagagctcctgatcgcattacacaacatcgactccgtgaagtgcgacatgaag
tccatcatcaaagccaccaacctgtgctttgcggagcggaacgtgtacacgtcagaggtg
ctggccgtggtgatgcagcagctgatggagcagagtcccctgcccatgctgctcatgagg
accgtcatccagtccctgaccatgtacccccgcctggggggcttcgtcatgaacatcctg
tcccgcctcatcatgaagcaggtgtggaagtaccccaaggtgtgggagggcttcatcaag
tgctgccagcgcaccaagccccagagcttccaggtcatcctgcagctgccgccccagcag
ctgggagccgtctttgacaagtgcccggagctccgggagcccctactggcccatgtccgc
tccttcaccccccaccagcaagctcacatccctaactccatcatgaccatcttggaggcc
agcggcaagcaggagccagaggccaaggaggcgcctgcggggcccctggaggaggatgac
ctggaacccctggccttggccccggccccagcaccccggccccctcaggacctcatcggc
ctgaggctggcccaggagaaggctttaaagcggcagctggaggaggagcagaagctgaag
ccgggaggagtgggagccccctcttcttcctcctctccctctccctcggcccggccgggc
cctcccccgtctgaggaagccatggatttccgggaggaggggcctgagtgcgagaccccg
ggcattttcatcagcatggatgacgactcggggctgacggaggccgcgctgttggactct
agtctcgaaggtcccctacccaaggagacggcagcgggtgggctgaccttgaaggaagag
cggagcccccagaccctcgcacctattggagaagatgctgtgaagacccccagcccggtt
gctgaggacgccagggaacctgaggccaaggggaacagctga
DBGET
integrated database retrieval system
