Nomascus leucogenys (northern white-cheeked gibbon): 100601323
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Entry
100601323 CDS
T03265
Symbol
SCN10A
Name
(RefSeq) sodium channel protein type 10 subunit alpha isoform X1
KO
K04842
voltage-gated sodium channel type X alpha
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nle04040
]
100601323 (SCN10A)
Ion channels [BR:
nle04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
100601323 (SCN10A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
Na_trans_cytopl
CcmD_alt
GPHH
Motif
Other DBs
NCBI-GeneID:
100601323
NCBI-ProteinID:
XP_012366250
Ensembl:
ENSNLEG00000031545
LinkDB
All DBs
Position
4:112707997..112799545
Genome browser
AA seq
1959 aa
AA seq
DB search
MEFPIGSLETNNFRRFTPESLVEIEKQIAAKHATKKVREKHREQKDQEEKPRPQLDLKAC
NQLPKFYGELPAELIGEPLEDLDPFYSTHRTFMVLNKGRTISRFSATRALWLFSPFNLIR
RTAIKVSVHSYPLWFSLFITVTILVNCVCMTRTDLPEKIEYVFTVIYTFEALIKILARGF
CLNEFTYLRDPWNWLDFSVITLAYVGTAIDLRGISGLRTFRVLRALKTVSVIPGLKVIVG
ALIHSVKKLADVTILTIFCLSVFALVGLQLFKGNLKNKCVKNDMAVNETTNYSSHRKPAI
YINKRGTSDPLLCGNGSDSGHCPDGYICLKTSDNPDFNYTSFDSFAWAFLSLFRLMTQDS
WERLYQQTLRASGKIYMVFFVLVIFLGSFYLVNLILAVVTMAYEEQNQATIDEIEAKEKK
FQEALEMLRKEQEVLAALGIDTTSLHSHNGSPLTSKNASERRHRIKPRVSEGSTEDNKSP
RSDPYNQRRMSFLGLASGKRRASHGSVFHFRSPGRDISLPEGVTDDGVFPGDHESHRGSL
LLGGGAGQHGPLPRSPLPQPSNPDFRHGEDEHQPPPTSELAPGAVDVSAFDAGQKKTFLS
AEYLDEPFRAQRAMSVVSIITSVLEELEESEQKCPPCLTSLAQKYLIWDCCPMWVKLKTI
LFGLVTDPFAELTITLCIVVNTIFMAMEHHGMSPTFEAMLQIGNIVFTIFFTAEMVFKII
AFDPYYYFQKKWNIFDCIIVTVSLLELGVAKKGSLSVLRSFRLLRVFKLAKSWPTLNTLI
KIIGNSVGALGNLTIILAIIVFVFALVGKQLLGENYRSNRKNISAPHEDWPRWHMHDFFH
SFLIVFRILCGEWIENMWACMEVGQKSICLILFLTVMVLGNLVVLNLFIALLLNSFSADN
LTAPEDDGEVNNLQVALARIQVFGHRTKQALCSFFSRPCPFPRPKAEPELVAKLPLSSSK
AENHIAANTARGSSGGLQAPRGPRDEHSDFIANPTVWVSVPIAEGESDLDDLEDDGEEDA
QSSQQEVIPKGQQEQLQQVERCEDHLTPRSPGTGTSSEDLAPSLGETWKDESVPQAPAEG
VDDTSSSEGSTVDCPDPEEILRKIPELADDLEEPDDCFTEGCIRHCPCCKVDTTKSPWDV
GWQVRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDYYLDQKPTVKALLEYTDRVFTFIF
VFEMLLKWVAYGFKKYFTNAWCWLDFLIVNISLISLTAKILEYSEVAPIKALRTLRALRP
LRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFWRCINYTDGE
FSLVPLSIVNNKSDCKIQNSTGSFFWVNVKVNFDNVAMGYLALLQVATFKGWMDIMYAAV
DSREVNMQPKWEDNVYMYLYFVIFIIFGGFFTLNLFVGVIIDNFNQQKKKLGGQDIFMTE
EQKKYYNAMKKLGSKKPQKPIPRPLNKFQGFVFDIVTRQAFDITIMVLICLNMITMMVET
DDQSEEKTKILGKINQFFVAVFTGECVMKMFALRQYYFTNGWNVFDFIVVVLSIASLVFS
AILKSLQSYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLV
MFIYSIFGMSSFPHVRWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPPY
CDPNLPNSNGTRGDCGSPAVGIIFFTTYIIISFLIVVNMYIAVILENFNVATEESTEPLS
EDDFDMFYETWEKFDPEATQFITFSALSDFADTLSGPLRIPKPNRNILIQMDLPLVPGDK
IHCLDILFAFTKNVLGESGELDSLKANMEEKFMATNLSKSSYEPIATTLRWKQEDISATV
IQKAYRSYVLHRSMALSNTPCVPRAEEEAASLPDEGFVAFTANENCVLPDKSETASATSF
PPSYESVTRGLSDRVNMRTSSSIQDGDEATSMEVTTPGP
NT seq
5880 nt
NT seq
+upstream
nt +downstream
nt
atggaattccccattggatccctcgaaactaacaacttccgtcgctttactccggagtca
ctggtggagatagagaagcaaattgctgccaagcacgcaacaaagaaagtcagagagaag
catagggagcagaaggaccaagaagagaagcctcggccccagctagacttgaaagcctgc
aaccagctgcccaagttctatggtgagctcccagcagaactgatcggggagcccctggag
gatctagaccccttctacagcacacaccggacatttatggtgctgaacaaagggaggacc
atttcccggtttagtgccactcgggccctgtggctattcagtcctttcaacctgatcaga
agaacggccatcaaagtgtctgtccactcatatcctttgtggttcagtttatttattacg
gtcactattttggttaattgtgtgtgcatgacccgaactgaccttccagagaaaattgaa
tatgtcttcactgtcatttacactttcgaagccttgataaagatactggcaagaggattt
tgtctaaacgagttcacgtacctgagagatccttggaactggctggattttagtgtcatt
acgctggcatatgttggcacagcaatagatctccgtgggatctcaggcctgcggacattc
agagttcttagagcattaaaaacagtttctgtgatcccaggcctgaaggtcattgtgggg
gctctgattcactcagtgaagaaactggctgatgtgaccatcctcaccatcttctgcctg
agtgtttttgccttggtggggctgcaactcttcaagggcaacctcaaaaataaatgtgtc
aagaatgacatggctgtcaatgagacaaccaactactcatctcacagaaaaccagctatc
tacataaataagagaggcacttctgatcccttactgtgtggcaatggatctgactcaggc
cactgccctgatggttatatctgccttaaaacttctgacaacccggattttaactacacc
agctttgattcctttgcttgggctttcctctcactgttccgcctcatgacacaggattcc
tgggaacgcctctaccagcagaccctgagggcttctgggaaaatctatatggtctttttt
gtgctcgtaatcttcctgggatctttctacctggtcaacttgatcttggctgtagtcacc
atggcgtatgaggagcagaaccaggcaaccattgatgaaattgaagcaaaggagaagaag
ttccaggaggcccttgagatgctccggaaggagcaggaggtgctagcagcgctagggatt
gacacaacttctctccactcccacaatggatcacctttaacctccaaaaatgccagtgag
agaaggcatagaataaagccaagagtgtcagagggctccacagaagacaacaaatcaccc
cgctctgatccttacaaccagcgcaggatgtcttttctaggcctcgcctctggaaaacgc
cgggctagtcatggcagcgtgttccatttccggtcccctggccgagatatctcactccct
gagggagtcacagatgatggagtctttcctggagaccacgaaagccatcggggctccctg
ctgctgggtgggggtgctggccagcatggccccctccctagaagccctcttcctcaaccc
agtaaccctgacttcaggcatggagaagatgaacaccaaccgccgcccactagtgagctt
gcccctggagctgtcgatgtctcggcattcgatgcaggacaaaagaagactttcttgtca
gcagaatacttagatgaacctttccgagcccaaagggcaatgagtgttgtcagtatcata
acctccgtccttgaggaactcgaggagtctgaacagaagtgcccaccctgcttgaccagc
ttggctcagaagtatctgatttgggattgctgccccatgtgggtgaagctcaagacaatt
ctctttgggcttgtgacggatccctttgcagagctcaccatcaccttgtgcatcgtggtg
aacaccatcttcatggccatggagcaccatggcatgagccctaccttcgaagccatgctc
cagataggcaacattgtcttcaccatattttttactgctgaaatggtcttcaaaatcatt
gccttcgacccatactattatttccagaagaagtggaatatctttgactgcatcatcgtc
actgtgagtctgctagagctgggcgtggccaagaagggaagcctgtctgtgctgcggagc
ttccgcttgctgcgcgtattcaagctggccaagtcctggcccaccttaaacacactcatc
aagatcatcggaaactcagttggggcactggggaacctcaccatcatcctggccatcatt
gtctttgtctttgctctggttggcaagcagctcctaggggaaaactaccgtagcaaccga
aaaaatatctccgcaccccatgaagactggccccgctggcacatgcacgacttcttccac
tctttcctcattgtcttccgtatcctctgtggagagtggattgagaacatgtgggcctgc
atggaagtcggccaaaaatccatatgtctcatccttttcttgacggtgatggtgctaggg
aatctggtggtgcttaacctgttcatcgccctgctgttgaactctttcagtgctgacaac
ctcacagccccagaggatgatggggaggtgaacaacctgcaggtggccttggcacggatc
caggtctttggccatcgtaccaagcaggctctttgcagcttcttcagcaggccctgccca
ttccccaggcccaaggcagagcccgagctggtggcgaaactcccactctccagctccaag
gctgagaaccacattgctgccaatacggccagggggagctctggagggctccaagctccc
agaggccccagggatgagcacagtgacttcatcgctaatcctactgtgtgggtctctgtg
cccattgctgaaggtgaatctgatcttgatgacttggaggatgatggtgaggaagatgct
cagagctcccagcaggaagtgatccccaaaggacagcaggagcagctgcagcaagttgag
aggtgtgaggaccacctgacacccaggagcccaggcactggaacatcttctgaggacctg
gctccatccctgggtgagacgtggaaagatgagtctgttcctcaggcccctgccgaggga
gtggacgacacaagctcctctgagggcagcacggtggactgcccagatcctgaggagatc
ctgaggaagatccctgagctggcagatgacctagaagaaccagatgattgcttcacagaa
ggatgcattcgccactgtccctgctgcaaagtggataccaccaagagtccatgggatgtg
ggctggcaggtgcgcaagacttgctaccgtattgtggagcacagctggtttgagagcttc
atcatcttcatgatcctgctcagcagtggatctctggccttcgaagactattacctggac
cagaagcccacggtgaaagctttgctggagtacactgacagggtcttcacctttatcttt
gtgttcgagatgctgcttaagtgggtggcctatggcttcaaaaagtacttcaccaatgcc
tggtgctggctggacttcctcattgtgaatatctcactgataagtctcacagcgaagatt
ctggaatattctgaagtggctcccatcaaagcccttcgaacccttcgcgctctgcggcca
ctgcgggctctgtctcgatttgaaggcatgcgggtggtggtggatgccctggtgggcgcc
atcccgtccatcatgaatgtcctcctcgtctgcctcatcttctggctcatcttcagcatc
atgggcgtgaacctcttcgcagggaagttttggagatgcatcaactataccgatggagag
ttttctcttgtacctttgtcgattgtgaataacaagtctgactgcaagattcaaaactcc
accggcagcttcttctgggtcaatgtgaaagtcaactttgataatgttgcaatgggttac
cttgcacttctgcaggtggcaacctttaaaggctggatggacattatgtatgcagctgtt
gattcccgggaggtcaacatgcaacccaagtgggaggacaacgtgtacatgtatttgtac
tttgtcatcttcatcattttcggaggcttcttcacactgaatctctttgttggggtcata
attgacaacttcaatcaacagaaaaaaaagttagggggccaggacatcttcatgacagag
gagcagaagaagtactacaatgccatgaagaagttgggctccaagaagccccagaagccc
atcccacggcccctgaacaagttccagggttttgtctttgacatcgtgaccagacaagct
tttgacatcaccatcatggtcctcatctgcctcaacatgatcaccatgatggtggagact
gatgaccagagtgaagaaaagacgaaaattctgggcaaaatcaaccagttctttgtggcc
gtcttcacaggcgaatgtgtcatgaagatgttcgctttgaggcagtactacttcaccaat
ggctggaatgtgtttgacttcattgtcgtggttctctccattgcgagcctcgttttttct
gcaattcttaagtcacttcaaagttacttctccccgacgctcttcagagtcatccgcctg
gcccgaatcggccgcatcctcagactgatccgagcggccaaggggatccgcacgctgctc
tttgccctcatgatgtccctgcctgccctcttcaacatcgggttgctgctcttccttgtc
atgttcatctactccatcttcggtatgtccagctttccccatgtgaggtgggaggctggc
atcgacgacatgttcaacttccagaccttcgccaacagcatgctgtgcctcttccagatc
accacgtcggccggctgggatggcctcctcagccccatcctcaacacagggcccccctac
tgtgaccccaatctgcccaatagcaatggcaccagaggggactgtgggagcccagccgta
ggcatcatcttcttcaccacctacatcatcatctccttcctcatcgtggtcaacatgtac
atcgcagtgattctggagaacttcaatgtggccacggaggagagcaccgagcccctgagt
gaggacgactttgacatgttctatgagacctgggagaagtttgacccagaggccactcag
tttattaccttttctgctctctcggattttgcagacactctctctggtcccctgagaatc
ccaaaacccaatcgaaatatactgatccagatggacctgcctttggtccctggagataag
atccactgcttggacatcctttttgctttcaccaagaatgtcctaggagaatctggggag
ttggattctctgaaggcaaatatggaggagaagtttatggcaactaatctttcaaaatca
tcctatgaaccaatagcaaccactctccgatggaagcaagaagacatttcagccactgtc
attcaaaaggcctatcggagctatgtgctgcaccgctccatggcactctctaacacccca
tgtgtgcccagagctgaggaggaggctgcatcactcccagatgaaggttttgttgcattc
acagcaaatgaaaattgtgtactcccagacaaatctgaaactgcatctgcgacatctttc
ccaccgtcctatgagagtgtcactagaggccttagtgatagagtcaacatgaggacatct
agctcaatacaagatggagatgaagccaccagtatggaggtgactacccctgggccctag
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integrated database retrieval system
