Nomascus leucogenys (northern white-cheeked gibbon): 100601668
Help
Entry
100601668 CDS
T03265
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha isoform X1
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nle04040
]
100601668 (SCN11A)
Ion channels [BR:
nle04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
100601668 (SCN11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
100601668
NCBI-ProteinID:
XP_030666058
Ensembl:
ENSNLEG00000026898
LinkDB
All DBs
Position
4:112465101..112658510
Genome browser
AA seq
1792 aa
AA seq
DB search
MDDRCYPVIFPDERNFRPFTSDSLAAIEKRIAIQKEKKKSKDQTGEVPQPQPQLDLKASR
KLPKLYGDIPRELIGKPLEDLDPFYRNHKTFMVLNKKRTIYRFSAKRALFIFGPFNSIRS
LAIRVSVHSLFSMFIIGTVIINCVFMATGPAKNSNSNNTDIAECVFTGIYIFEALIKILA
RGFILDEFSFLRDPWNWLDSIVIGIAIVSYIPGITIQVSSLRTFRVFRALKAISVVSRLK
VIVGALLRSVKKLVNVIILTFFCLSIFALVGQQLFMGSLDLKCISRDCKIISNLEAYDHC
LEKKENSTEFKMCGTWMGNSACSIQYECRHTKMNPDYNYTNFDNFGWSFLAMFRLMTQDS
WEKLYQQTLRTTGLYSVFFFIVVIFLGSFYLINLTLAVVTMAYEEQNKNVAAEIEAKEKM
FQEAQQLLKEEKEALVAMGIDRSSLTSLETSYFTPKKRKLFGNKKRKSFFLRESGKDQPP
GSDSDEDSQKKPQLLEQTKRLSQNLSLDHFDEHGDPLQRQRALSAVSILTITMKEQEKSQ
EPCLPCGENLASKYLVWNCCPQWLCIKKVLRTVMTDPFTELAITICIIINTVFLAMEHHK
MEESFEKMLNIGNSVFTGIFMAEMCLKIIALDPYHYFRRGWNIFDSIVALLSFADVISSK
FEKGSWPFLRSFRVLRVFKLAKSWPTLNTLIKIIGNSVGALGSLTVVLVIVIFIFSVVGM
QLFGHSFNSRKSKKLCGLTGPTVSCLRHWHMGDFWHSFLVVFRILCGEWIENMWECMQEA
NGSSSSLCVIVFILITVIGKLVVLNLFIALLLNSFSNEERNGNLEGEARKTKVQLALDRF
RRGFCFVRHILEHFCHKWCRKQNLPQQKEVTGGCAAQSKDIIHLVMEMKRSSETQEELGI
LTSVPKTLGVRHDWTWLAPLAEEEDDVEFSGEDNAQRITQPEAEQQAYELHQENKKPTSQ
RVQSVEIDMFSEDEPHLTIQDPRKKSDVTSILSECSTIDLQDGFGWLPEMVPKKEPERCL
PKGFGCCFPCCSLDKRKPPWVIWWNLRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVH
LEKQPKIQELINCTDIIFTYIFIGEMVLKWVAFGFGKYFTSAWCCLDFIIVIISVTTLIN
LKELKSFRTLRALRPLRALSQFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVHF
FSGKFGKCINGTDSVINYTIITNKSQCESGNFSWINQKVNFDNVGNAYLALLQVATFKGW
MDIIYAAVDSREKEQQPEFESNSFGYIYFVVFIIFGSFFTLNLFIGVIIDNFNQQQKKLG
GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKCQGLVFDVVTSQIFDIVIISLIILN
MISMMAESNNQPEAMKSILDHLNLVFVVIFTLECLIKIFALRQYYFTNGWNLFDCVVVLL
SIVSTMISTLEKQEYIPFPPTLFRIVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFN
IGLLLFLIMFIYAILGMNWFSKVNPESGIDDIFNFKTFASSMLCLFQISTSAGWDSLLSP
MLRSKESCNSSSENCHLPGIATSYFVSYIIISFLIVVNMYIAVILENFNTATEESEDPLG
EDDFDIFYEVWEKFDPEATQFIKYAALSDFADALPEPLRVAKPNKYQFLVMDLPMVSGDR
LHCMDILFAFTARVLGGSDGLDSMKTMMEEKFMEANPLKKLYEPIVTTTKRKEEERGAAI
IQKAFRKYMMKVTKGDQGDQNDLENRPHSPLQTLCNGDLSSFGVAKGKVHCD
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atggatgacagatgctacccagtaatctttccagacgagcggaatttccgccccttcact
tctgactctctggctgcaattgagaagcggattgccatccaaaaagagaaaaagaagtct
aaagaccagacaggagaagtaccccagcctcagcctcagcttgacctaaaggcctccagg
aagttgcccaagctctatggcgacattcctcgtgagctcataggaaagcctctggaagac
ttggacccattctaccgaaatcataagacatttatggtgttaaacaaaaagaggacaatc
taccgcttcagtgccaagcgtgccttgttcatttttgggcctttcaattcaatcagaagt
ttagccattagagtctcagtccattcattattcagcatgttcattattggcactgttatc
atcaactgcgtgttcatggctacagggcctgctaaaaacagcaacagcaacaatactgac
attgcagagtgtgtcttcactgggatttatatttttgaagctttgattaaaatattggca
agaggtttcattctggatgagttttctttccttcgagatccatggaactggctggactcc
attgtcattggaatagcgattgtgtcatatattccaggaatcaccatccaagtgtcatcc
ctgcgtaccttccgtgtgttcagagctttgaaagcaatttcagtagtttcacgtctgaag
gtcatcgtgggggccttgctgcgctctgtgaagaagctggtcaacgtgattatcctcacc
ttcttttgcctcagcatctttgccctggtaggtcagcagctcttcatgggaagtctggac
ctgaaatgcatctcgagggactgtaaaattatcagtaacctggaagcttatgaccattgc
cttgaaaagaaagaaaattcgactgaattcaaaatgtgtggcacctggatgggtaacagc
gcctgttccatacaatatgaatgtaggcataccaaaatgaatcctgactataattatacg
aattttgacaactttggctggtcttttcttgccatgttccggctgatgacccaagattcc
tgggagaagctttatcaacagaccctgcgtactactgggctctactcagtcttcttcttc
attgtggtcattttcctgggctccttctacctgattaacttaactctggctgttgttacc
atggcgtatgaggagcagaacaagaatgtagctgcagagatagaggccaaggaaaagatg
tttcaggaagcccagcagctgttaaaggaggaaaaggaggctctggttgccatgggaatt
gacagaagttcacttacttcccttgaaacatcatattttaccccaaaaaagagaaagctc
tttggtaataagaaaaggaagtccttctttttgagagagtctgggaaagaccagcctcca
gggtcagattctgatgaagattcccaaaaaaagccacagctcctagaacaaaccaaacga
ctgtcccagaatctatcactggaccactttgatgagcatggagatcctctccaaaggcag
agagcactgagtgctgtcagcatcctcaccatcaccatgaaggaacaagaaaaatcacaa
gagccttgtctcccttgtggagaaaacctggcatccaagtacctcgtgtggaactgctgc
ccccagtggctgtgcattaagaaggtcctgagaacggtgatgactgacccgtttactgag
ctggccatcaccatctgcatcatcatcaacactgtcttcttggccatggagcatcacaag
atggaggaaagttttgagaagatgttgaatatagggaattcggttttcactggcattttt
atggcagaaatgtgcctaaaaatcattgcgctcgatccctaccactactttcgccgaggc
tggaacatttttgacagcattgttgctcttctgagttttgcagatgtaataagcagtaaa
tttgaaaagggaagctggccattcttgcgttccttcagagtgctcagggtcttcaagtta
gccaaatcctggccaactttgaacacactaattaagataatcggcaactctgtcggagcc
cttggaagcctgactgtggtcctggtcattgtgatctttattttctcagtagttggcatg
cagctttttggtcacagcttcaattcccgaaagagtaaaaaactctgtggcctgacaggc
ccgacagtctcatgtttacggcactggcacatgggggatttctggcactccttcctagtg
gtattccgcatcctctgcggggaatggatcgaaaatatgtgggaatgtatgcaagaagcg
aatggatcatcatcatcattgtgtgttattgtcttcatattgatcacggtgataggaaaa
cttgtggtgctcaacctcttcattgccttactgctcaattcctttagcaatgaggaaaga
aatggaaacttagaaggagaggccaggaaaactaaagtccagttagcactggatcgattc
cgccggggtttttgttttgtgagacacattcttgagcatttctgtcacaagtggtgcagg
aagcaaaacttaccacagcaaaaagaggtgacaggaggctgtgctgcacaaagcaaagac
atcattcacctggtcatggagatgaaaaggagctcagagacccaggaggagcttggtata
ctaacctcagtaccaaagaccctgggcgtcaggcatgattggacttggttggcaccactt
gcggaggaggaagatgatgttgaattttctggtgaagataatgcacagcgcatcacacaa
cctgaggctgaacaacaggcctatgagctccatcaggagaacaagaagcccaccagccag
agagttcaaagtgtggaaattgacatgttctctgaagatgagcctcatctgaccatacag
gatccccgaaagaagtctgatgttaccagtatactatcagaatgtagcaccattgatctt
caggatggctttggatggttacctgagatggttcccaaaaaggaaccagagagatgtttg
cccaaaggctttggttgctgctttccatgctgtagcttggacaagagaaagcctccctgg
gtcatttggtggaacctgcggaaaacctgctaccaaatagtgaaacacagctggtttgag
agctttattatctttgtgattctgctgagcagtggggcactgatatttgaagatgttcac
ctcgagaaacaacccaaaatccaagaattaataaattgtactgacattatttttacatat
atctttatcggggagatggtactaaaatgggtagccttcggatttggaaagtatttcacc
agtgcctggtgctgccttgatttcatcattgtgattatctcagtgaccaccctcattaac
ttaaaggaattgaagtccttccggactctacgagcactgaggcctcttcgcgcgctgtcc
cagttcgaaggaatgaaggtggtggtcaatgctctcataggtgccatacctgccattctg
aatgttttgcttgtctgcctcattttctggctcatattttgtattctgggagtacacttc
ttttctggaaaatttgggaaatgcattaatggaacagactcagttataaattataccatc
attacaaataaaagtcaatgtgaaagtggcaatttctcttggatcaaccagaaagtcaac
tttgacaatgtgggaaatgcttacctcgctctgctgcaagtggcaacatttaagggctgg
atggatattatatacgcagctgttgattccagagagaaagaacaacagccagagtttgag
agcaattcattcggttacatttacttcgtagtctttatcatcttcggctcattcttcact
ctgaatctcttcattggtgttattattgacaacttcaaccaacagcagaaaaagttaggt
ggccaagacatttttatgacagaagaacagaagaaatactataatgcaatgaaaaaatta
ggatccaaaaaacctcaaaaacccattccacggcctctgaacaaatgtcaaggtctcgtg
ttcgatgtagtcacaagccagatctttgacatcgtcatcataagtctcattatcctaaac
atgattagcatgatggctgaatcaaataaccaacccgaagccatgaaatccatccttgac
catctcaacttggtctttgtggtcatctttacattagaatgtctcatcaaaatctttgct
ttgaggcaatactacttcaccaatggctggaatttatttgactgtgtggtcgtgcttctt
tccattgttagtacaatgatttctaccttggaaaaacaggagtacattcctttccctccg
acgctcttcagaattgtccgcttggctcggattggccgaatcctgaggcttgtccgggct
gcacgaggaatcaggactctcctctttgctctgatgatgtcacttccttctctgttcaac
attggtcttctactctttctgattatgtttatctatgccattttgggtatgaactggttt
tccaaagtgaatccagagtctggaattgatgatatattcaacttcaagacttttgccagc
agcatgctctgtctcttccagataagcacatcagcaggttgggattccctgctcagcccc
atgctgcgatcaaaagaatcatgtaactcttcctcagaaaactgccacctccctggcata
gccacatcctactttgtcagttacattatcatctcctttctcattgttgtcaacatgtac
attgctgtgattttagagaacttcaacacagccactgaagaaagtgaggaccctttgggt
gaagatgactttgacatattttatgaagtgtgggaaaagtttgacccagaagcaacacaa
tttatcaaatatgctgccctttctgactttgctgatgccttgcctgagcctttgcgtgtc
gcaaagccaaataaatatcaatttctagtaatggacttgcccatggtgagtggagatcgc
ctccactgcatggatattcttttcgccttcaccgctagggtactcggtggctctgatggc
ctggatagcatgaaaacaatgatggaagagaagttcatggaagccaatcctctcaagaag
ttgtatgaacccattgtcaccaccaccaagagaaaggaagaggaaagaggtgctgctatt
attcaaaaggcctttcgaaaatacatgatgaaggtgaccaagggtgaccaaggtgaccaa
aacgacttggaaaacagacctcattcaccactccagactctttgcaatggagacttgtct
agctttggggtggccaagggcaaggtccactgtgactga
DBGET
integrated database retrieval system
