Nomascus leucogenys (northern white-cheeked gibbon): 100602972
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Entry
100602972 CDS
T03265
Symbol
DDX20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nle03041
]
100602972 (DDX20)
Enzymes [BR:
nle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100602972 (DDX20)
Spliceosome [BR:
nle03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
100602972 (DDX20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Motif
Other DBs
NCBI-GeneID:
100602972
NCBI-ProteinID:
XP_003268017
Ensembl:
ENSNLEG00000004040
UniProt:
A0A2I3H3H8
LinkDB
All DBs
Position
12:complement(64230447..64241955)
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AA seq
824 aa
AA seq
DB search
MAAAFEAPGVLAAVATAMPAEHVAVQVPAPEPTPRPMRSLRTAQDLSSPRTRTGDVLLAE
PADFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIA
LDSLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK
CHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQML
AVSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKVVNSYPLAHKVFEEKTQHL
QELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQRLDAMAKLKQFHC
RVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEEN
MMMRIAQKCNINLLPLPDPIPSGLMEECVDWDVEVKAAVHTYGIASVPNQPLKKQIQKIE
RTLQIQKAHGDHMASSRNNSVSGLSVKSKNNTKQKLPVKSHSECGIIEKATSPKELGCDR
QSEEQMKNSVQTPIENSTNSQHQVKEALPVSLPQIPCLSSFKIHQPYTLTFAELVEDYEH
YIKEGLEKPVEIIRHYTGPGDQTVDPQNGFVRNKVTEQRVHVLASSSQSGDSESDSDSYS
SRTSSQSKGNKSYLEGSSDNQLKDSESTPVDDHISLEQPPNGSDTPNPEEYQESPGIQIK
TRHKEGANQRAKQSRRNLPRRSSFRLQTEAQEDGWYDCHRETHLSFSDTYQDYEEYWRAY
YRAWQEYYAAASHSYYWNAQRHPSWMAAYHMNTIYLQEMMYGNQ
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgtttgaagccccgggagtcttagcggcagtggcgactgctatgccggct
gagcatgtggccgtgcaggtcccggccccagagccaacacccaggcctatgaggagcctg
cggaccgctcaggatctcagcagcccgcggacccgcacgggggatgtgctgttggcggag
ccggccgacttcgagtcactgctgctttcgcggccggtgctggaggggctgcgggcggcc
ggcttcgagaggccctcgccggtgcagctcaaggccatcccgctggggcgctgcgggctc
gatttaattgttcaagctaaatctggcaccgggaaaacctgtgtgttctccaccatagct
ttggactctctcgttcttgaaaacttaagtacccagattttgatcttggcccctacaaga
gaaatcgctgtacagatacattctgttattacagccattggaataaaaatggaaggctta
gagtgtcatgtctttattggagggaccccattatcacaagacaaaaccagacttaaaaag
tgtcatattgctgttggatctcctggcagaattaagcaactcatagaacttgactacttg
aacccaggcagtatacgcctctttattcttgatgaagcagataagcttttagaagaaggc
agcttccaggagcaaataaattggatttattcttccttgcctgccagtaaacagatgctg
gcagtatcagctacttaccccgaatttttggctaatgctttgacaaagtacatgagagat
cccacttttgtaagactgaattccagtgatccaagtctcataggtttgaagcagtattac
aaagttgtcaattcgtaccctttggcacataaggtttttgaggaaaagactcagcattta
caggaactgttcagcagaattccatttaatcaagctttagtcttttctaatttgcacagc
agagcacaacatttggctgatatcctttcttctaaaggctttcctgccgagtgcatttca
ggcaatatgaatcagaatcagcgtcttgatgctatggctaaactgaagcagtttcattgc
agagtcctcatttccacagatttgacttctcgtgggattgatgctgagaaggtgaatctg
gttgtaaatctggatgtaccattggattgggagacatacatgcatcggattgggagagct
ggccgttttggtacattggggctgacagtgacctactgttgccggggagaggaagaaaat
atgatgatgagaattgcccagaaatgtaatatcaaccttctccctttaccagatcccatt
ccttctggtctgatggaagaatgtgtggattgggatgtggaggttaaagctgctgtgcat
acatatggcatagcaagtgtacctaaccaacccctaaaaaagcaaattcagaaaatagag
agaacccttcaaattcagaaagctcatggtgaccacatggcttcctctagaaataattct
gtatctggactatcagtcaaatcaaaaaataataccaaacaaaagcttcctgtgaaaagc
cactcagagtgtggaatcatagaaaaagcaacatcaccaaaagaactgggctgtgacagg
caatctgaagagcaaatgaagaattctgttcagactcccattgaaaactccaccaacagt
cagcaccaggtcaaagaagctttacctgtgtcactcccccagattccttgtctgtcttcc
tttaaaatccatcagccatacacgttgacttttgctgaattggtagaggattatgaacat
tatattaaagagggattagagaaacctgtggaaatcatcaggcactacacaggtcctggg
gatcagactgtggatcctcaaaatggttttgtgagaaataaagttactgaacagagagtc
catgtattggcaagtagtagccaatctggagactctgagagtgacagtgattcttacagc
tcaagaacctcttcccagagcaaaggaaataagtcatacttggaaggctcttctgataat
cagctgaaagactctgaatctactcctgtggatgatcatatttctttggaacaaccacca
aatggaagtgacacccccaatccagaggaatatcaagaatcacctggaatccagatcaag
acaagacataaagagggggctaaccagagagctaagcagagccggagaaacctacccagg
cggtcttccttcagattgcagactgaagcccaggaagatggttggtatgactgtcatagg
gaaacacatctgagtttttctgatacctatcaggattatgaggagtactggagagcttac
tacagggcatggcaagaatattatgctgctgcttctcattcatattattggaatgctcag
agacatccaagttggatggcagcttatcacatgaataccatttatctacaagaaatgatg
tatggtaaccagtga
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