Nomascus leucogenys (northern white-cheeked gibbon): 100603333
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Entry
100603333 CDS
T03265
Symbol
FDFT1
Name
(RefSeq) squalene synthase isoform X3
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle00100
Steroid biosynthesis
nle01100
Metabolic pathways
Module
nle_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
100603333 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
nle01006
]
100603333 (FDFT1)
Enzymes [BR:
nle01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
100603333 (FDFT1)
Prenyltransferases [BR:
nle01006
]
Terpene biosynthesis
Squalene/phytoene synthase
100603333 (FDFT1)
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Paralog
GFIT
Motif
Pfam:
SQS_PSY
DUF8843
Motif
Other DBs
NCBI-GeneID:
100603333
NCBI-ProteinID:
XP_003271489
Ensembl:
ENSNLEG00000015059
UniProt:
A0A2I3HU46
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Position
4:complement(139557548..139594295)
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AA seq
417 aa
AA seq
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MEFVKCLGHPEEFYNLVRFRIGGKRKVMPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQA
LDGEMRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQ
VLEDFPTISLEFRNLAEKYQTVIADICRRMGTGMAEFLDKHVTSEQEWDKYCHYVAGLVG
IGLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQEGREFWPQEVWSRYV
KKLGDFTKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATL
AACYNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTR
QIISTIRTQNLPNCQLISRSHYSPIYLSFVMLLAALSWQYLTTLSQVTEDYVQTGEH
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgtgaaatgcctgggccaccccgaagagttctacaacctggtgcgcttccgg
atcgggggcaagcggaaggtgatgcccaagatggaccaggactcgctcagcagcagcctg
aaaacttgctacaagtatctcaatcagaccagtcgcagtttcgcagctgttatccaggcg
ctggatggggaaatgcgcaatgcagtgtgcatattttatctggttctccgagctctggac
acactggaagatgacatgaccatcagtgtggaaaagaaggtcccgctgttacacaacttt
cactctttcctttaccagccagactggcggttcatggagagcaaggagaaggatcgccag
gtgctggaggacttcccaaccatctccctcgagtttagaaatctggctgagaaataccaa
acagtgattgccgacatttgccggagaatgggaactgggatggcagagtttttggataag
catgtgacctctgaacaggagtgggacaagtactgccactatgttgctgggctggtagga
attggcctttcccgtcttttctcggcctcagaatttgaagaccccttagttggtgaagat
acagaacgtgccaactctatgggcctgtttctgcagaaaacaaacatcattcgtgactat
ctggaagaccagcaagaaggaagagagttttggcctcaagaggtttggagcaggtatgtt
aagaagttaggggattttactaagccggagaatattgacttggctgtgcagtgcctgaat
gaacttataaccaatgcactgcaccacatcccagatgtcatcacctacctttcgagactc
agaaaccagagtgtgtttaacttctgtgctattccacaggtgatggccattgccactttg
gctgcctgttataataaccagcaggtgttcaaaggggcagtgaagattcggaaagggcaa
gcagtgaccctgatgatggatgccaccaatatgccagctgtcaaagccatcatatatcag
tatatggaagagatttatcatagaatccccgactcagacccatcttctagtaaaacaagg
cagatcatctccaccatccggacgcagaatcttcccaactgtcagctgatctcccgaagc
cactactcccccatctacctgtcgtttgtcatgctcttggctgctctgagctggcagtac
ctgaccacactctcccaggtaacagaagactatgttcagactggagaacactga
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