Nomascus leucogenys (northern white-cheeked gibbon): 100604028
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Entry
100604028 CDS
T03265
Symbol
PABPC4
Name
(RefSeq) polyadenylate-binding protein 4 isoform X3
KO
K13126
polyadenylate-binding protein
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle03015
mRNA surveillance pathway
nle03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100604028 (PABPC4)
09123 Folding, sorting and degradation
03018 RNA degradation
100604028 (PABPC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nle03019
]
100604028 (PABPC4)
03041 Spliceosome [BR:
nle03041
]
100604028 (PABPC4)
Messenger RNA biogenesis [BR:
nle03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100604028 (PABPC4)
mRNA cycle factors
Stress granule specific factors
100604028 (PABPC4)
Spliceosome [BR:
nle03041
]
Complex C
Other components
Complex C specific factors
100604028 (PABPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_7
RRM_occluded
RRM_10
RBD_RDR6
RRM_3
POP1_C
ApbA_C
Motif
Other DBs
NCBI-GeneID:
100604028
NCBI-ProteinID:
XP_003273359
Ensembl:
ENSNLEG00000011928
UniProt:
G1RMR4
LinkDB
All DBs
Position
12:complement(8628717..8645025)
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AA seq
644 aa
AA seq
DB search
MNAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEK
HEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN
LDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS
KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP
PYYTPNQLAQMRPNPRWQQGGRPQGFQGMPSAIRQSGPRPTLRHLAPTGSECPDRLAMDF
GGAGAAQQGLTDSCQSGGVPTAVQNLAPRAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQ
APQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNS
ELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVAAATS
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgcggccagcagctaccccatggcctccctgtacgtgggcgatctgcattcg
gacgtcaccgaggccatgctgtacgaaaagttcagccccgcggggcctgtgctgtccatc
cgggtctgccgcgatatgatcacccgccgctccctgggctatgcctacgtcaacttccag
cagccggccgacgctgagcgggctttggacaccatgaactttgatgtgattaagggaaag
ccaatccgcatcatgtggtctcagagggatccctctttgagaaaatctggtgtgggaaac
gtcttcatcaagaacctggacaaatctatagataacaaggcactttatgatactttttct
gcttttggcaacatactatcctgcaaggtggtgtgtgatgagaacggctctaagggttat
gcctttgtccacttcgagacccaagaggctgccgacaaggccatcgagaagatgaatggc
atgctcctcaatgaccgcaaagtatttgtgggcagatttaagtctcgcaaagagcgggaa
gctgagcttggagccaaagccaaggaattcaccaatgtttatatcaaaaactttggggaa
gaggtggatgatgagagtctgaaagagctattcagtcagtttggtaagaccctaagtgtc
aaggtgatgagagatcccagtgggaaatccaaaggctttggctttgtgagttacgaaaaa
cacgaggatgccaataaggctgtggaagagatgaatggaaaagaaataagtggtaaaatc
atatttgtaggccgtgcacaaaagaaagtagaacggcaggcagagttaaaacggaaattt
gaacagttgaaacaggagagaattagtcgatatcagggggtgaatctctacattaagaac
ttggatgacactattgatgatgagaaattaaggaaagaattttctccttttggatcaatt
accagtgctaaggtaatgctggaggatggaagaagcaaagggtttggcttcgtctgcttc
tcgtctcctgaagaagcaaccaaagcagtcactgagatgaatggacgcattgtgggctcc
aagccactatatgttgccctggcccagaggaaggaagagagaaaggctcacctgaccaac
cagtatatgcaacgagtggctggaatgagagcacttcctgccaatgccatcttaaatcag
ttccagcctgcagcgggtggctactttgtgccagcagtcccacaggctcagggaaggcct
ccatattatacacctaaccagttagcacagatgaggcctaatccacgctggcagcaaggt
gggagacctcaaggcttccaaggaatgccaagtgctatacgccagtctgggcctcgtcca
actcttcgccatctggctccaactgggtctgagtgcccggaccgcttggctatggacttt
ggtggggctggtgccgcccagcaagggctgactgacagctgccagtctggaggcgttccc
acagctgtgcagaacttagcgccacgcgctgctgttgccgctgctgctccccgggctgtt
gccccctacaaatacgcctccagtgtccgcagccctcatcctgccatacagcctctgcag
gcaccccagcctgcggtccatgtgcaggggcaggagccactgactgcctccatgctggct
gcagcacccccccaggaacagaagcagatgctgggagaacgcttgttcccactcatccaa
acaatgcattcaaacctggctgggaagatcacgggaatgttgctggagatagacaactct
gagctgctgcacatgttagagtcccccgagtctctccgctccaaggtggatgaagctgta
gcagttctacaggctcatcatgccaagaaagaagctgcccagaaggtgggcgctgttgct
gctgctacctcttag
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