Nomascus leucogenys (northern white-cheeked gibbon): 100604147
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Entry
100604147 CDS
T03265
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100604147 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nle03041
]
100604147 (SF3B1)
03036 Chromosome and associated proteins [BR:
nle03036
]
100604147 (SF3B1)
Spliceosome [BR:
nle03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
100604147 (SF3B1)
Complex B
100604147 (SF3B1)
Complex C
U2 SnRNP specific factors
100604147 (SF3B1)
Chromosome and associated proteins [BR:
nle03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
100604147 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
TALPID3
Motif
Other DBs
NCBI-GeneID:
100604147
NCBI-ProteinID:
XP_003253929
Ensembl:
ENSNLEG00000006861
UniProt:
A0A2I3GPD3
LinkDB
All DBs
Position
22a:complement(97695327..97740956)
Genome browser
AA seq
1304 aa
AA seq
DB search
MAKIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAA
TELEDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYK
KHRRTMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGE
LKVVNGAAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAK
GSETPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKNRWDETPKTE
RDTPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPI
GTPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAG
YVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLV
DVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLM
SPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNL
AKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQA
RHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYG
IESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSP
DEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVEL
ANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAF
QEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAV
VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRL
TPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNT
FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE
LNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVY
GFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARK
VRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYELDYIL
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgccaagactcacgaagatattgaagcacagattcgagaaattcaaggc
aagaaggcagctcttgatgaagctcaaggagtgggcctcgattctacaggttattatgac
caggaaatttatggtggaagtgacagcagatttgctggatacgtgacatcaattgctgca
actgaacttgaagatgatgacgatgactattcatcatctacgagtttgcttggtcagaag
aagccaggatatcatgcccctgtggcattgcttaatgatataccacagtcaacagaacag
tatgatccatttgctgagcaccgacctccaaagattgcagaccgggaagatgaatacaaa
aagcataggcggaccatgataatttccccagaacgtcttgatccttttgcagatggaggg
aagacccctgatcctaaaatgaatgctaggacttacatggatgtaatgcgagaacaacac
ttgactaaagaagaacgagaaattaggcaacagctagcagaaaaagctaaagctggagaa
ctaaaagtcgtcaatggagcagcagcgtcccagcctccatcaaaacgaaaacggcgttgg
gatcaaacagctgatcagactcctggtgccactcccaaaaaactatcaagttgggatcag
gcagagacccctggacatactccttccttaagatgggatgagacaccaggtcgtgcaaag
ggaagtgagactcctggagcaaccccaggctcaaaaatatgggatcctacacctagccac
acaccagcgggagctgctactcctggacgaggcgatacaccaggccatgcgacaccaggc
catggaggcgcaacttccagtgctcgtaaaaacagatgggatgaaacccccaaaacagag
agagatactcctgggcatggaagtggatgggctgagactcctcgaacagatcgaggtgga
gattctattggtgaaacaccgactcctggagccagtaaaagaaaatcacggtgggatgag
acaccagctagtcagatgggtggaagcactccagttctgacccctggaaagacaccaatt
ggcacaccagccatgaacatggctacccctactccaggtcacataatgagtatgactcct
gaacagcttcaggcttggcggtgggaaagagaaattgatgagagaaatcgcccactttct
gatgaggaattagatgctatgttcccagaaggatataaggtacttcctcctccagctggt
tatgttcctattcgaactccagctcgaaagctgacagctactccaacacctttgggtggt
atgactggtttccacatgcaaactgaagatcgaactatgaaaagtgttaatgaccagcca
tctggaaatcttccatttttaaaacctgatgatattcagtactttgataaactattggtt
gatgttgatgaatcaacacttagtccggaagagcaaaaagagagaaaaataatgaagttg
cttttaaaaattaagaatggaacaccaccaatgaggaaggctgcattgcgtcagattact
gataaagctcgtgaatttggagctggtcctttgtttaatcagattcttcctctactgatg
tctcctacacttgaggatcaagagcgtcatttacttgtgaaagttattgataggatactg
tacaaacttgatgacttagttcgtccatatgtgcataagatcctcgtggtcattgaaccg
ctattgatcgatgaagattactatgctagagtggaaggccgagagatcatttctaatttg
gcaaaggctgctggtctggctactatgatctctaccatgagacctgatatagataacatg
gatgagtatgtccgtaacacaacagctagagcttttgctgttgtagcctctgccctgggc
attccttctttattgcccttcttaaaagctgtgtgcaaaagcaagaagtcctggcaagcg
agacacactggtattaagattgtacaacagatagctattcttatgggctgtgccatcttg
ccacatcttagaagtttagttgaaatcattgagcatggtcttgtggatgagcagcagaaa
gttcggaccatcagtgctttggccattgctgccttggctgaagcagcaactccttatggt
atcgaatcttttgattctgtgttaaagcctttatggaagggtatccgccaacacagagga
aagggtttggctgctttcttgaaggctattgggtatcttattcctcttatggatgcagaa
tatgccaactactatactagagaagtgatgttaatccttattcgagaattccagtctcct
gatgaggaaatgaagaaaattgtgctgaaggtggtaaaacagtgttgtgggacagatggt
gtagaagcaaactacattaaaacagagattcttcctcccttttttaaacacttctggcag
cacaggatggctttggatagaagaaattaccgacagttagttgatactactgtggagttg
gcaaacaaagtaggtgcagcagaaattatatccaggattgtggatgatctgaaagatgaa
gctgaacagtacagaaaaatggtgatggagacaattgagaaaattatgggcaatttggga
gcagcagatattgatcataaacttgaagaacaactgattgatggtattctttatgctttc
caagaacagactacagaggactcagtaatgttgaacggctttggcacagtggttaatgct
cttggcaaacgagtcaaaccatacttgcctcagatctgtggtacagttttgtggcgttta
aataacaaatctgcaaaagttaggcaacaggcagctgacttgatttctcgaactgctgtt
gtcatgaagacttgtcaagaggaaaaattgatgggacacttgggtgttgtattgtatgag
tatttgggtgaagagtaccctgaagtattgggcagcattcttggagcactgaaggccatt
gtaaatgtcataggtatgcataagatgactccaccaattaaagatctgctgcctagactc
acccccatcttaaagaacagacacgaaaaagtacaagagaattgtattgatcttgttggt
cgtattgctgacaggggagctgaatatgtatctgcaagagagtggatgaggatttgcttt
gagcttttagagctcttaaaagcccacaaaaaggctattcgtagagccacagtcaacaca
tttggttatattgcaaaggccattggccctcatgatgtattggctacacttctaaacaac
ctcaaagttcaagaaaggcagaaccgagtttgtaccactgtagcaatagctattgttgca
gaaacatgttcacccttcacagtactccctgccttaatgaatgaatacagagttcctgaa
ctaaatgttcaaaatggagtgttaaaatcgctttccttcttgtttgaatatattggtgaa
atgggaaaagactacatttatgctgtaacaccgttacttgaagatgctttaatggataga
gaccttgtacacagacagacggctagtgcagtggtacagcacatgtcacttggggtttat
ggatttggttgtgaagattcgctgaatcacttgttgaactatgtatggcccaatgtgttt
gagacatctcctcatgtaattcaggcagttatgggagccctagagggcctgagagttgct
attggaccatgtagaatgttgcaatattgtttacagggtctgtttcacccagcccggaaa
gtcagagatgtatattggaaaatttacaactccatctacattggttcccaggacgctctc
atagcacattatccaagaatctacaacgatgataagaacacctatattcgttatgaactt
gactatatcttataa
DBGET
integrated database retrieval system