Nomascus leucogenys (northern white-cheeked gibbon): 100604282
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Entry
100604282 CDS
T03265
Symbol
RC3H1
Name
(RefSeq) roquin-1 isoform X3
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nle03000
]
100604282 (RC3H1)
04121 Ubiquitin system [BR:
nle04121
]
100604282 (RC3H1)
Transcription factors [BR:
nle03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
100604282 (RC3H1)
Ubiquitin system [BR:
nle04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100604282 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-CCCH_UNK
zf-C3HC4_2
FYVE
zf_CCCH_4
zf-CCCH_4
Vesi_VP2
PaaA_PaaC
Baculo_IE-1
zf-RING_4
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
100604282
NCBI-ProteinID:
XP_004089857
Ensembl:
ENSNLEG00000015327
LinkDB
All DBs
Position
12:27750051..27842371
Genome browser
AA seq
1124 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSAAILPDE
GAVDLPSRKPPALPNGIVSTGNTVTQLIPRGTDPSYDSSLKPGKIDHLSSSAPGSPPDLL
ESVPKSISALPVNPHPIPPRGPADLPPMPVTKPLQMVPRGSQLYPAQQTDVYYQDPRGTA
PPFEPAPYQQGMYYTPPPQCVSRFVRPPPSAPEPAPPYLDHYPPYLQERVVNSQYGTQPQ
QYPPIYPSHYDGRRVYPAQSYTREEIFRESPIPIEIPPAAVPSYVPESRERYQQIESYYP
VAPHPTQIRPSYLREPPYSRLPPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSP
TLPPTFHPEEFLDEDLKIAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAAGSVEM
MNVESKGMRDQRLDLQRRAAETSDDDLIPFGDRPTVSRFGAISRTSKTMYQGAGPMQAMA
PQGAPTKSINISDYSPYGTHGGWGGSPYSPHQNIPSQGHFGERERISMSEVASHGKPLPS
AEREQLRLELQQLNHQISQQTQLRGLEREANTLAGQSQPPPPPPPKWPGMISSEQLSLEL
HQVEREIGKRTRELSMENQCSLDMKSKLNTSKQAENGQPEPQNKVPAEDLTLTFSDVPNG
SALTQENISLLSNKTSSLNLSEDPEGGGDNNDSQRSGVTPSSAP
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacaatggacggatttcctctcctgcccaatttgcactcagact
ttcgacgaaacaattcgaaagcccatcagtttgggttgtggccatactgtctgcaagatg
tgcctgaataaactccaccgcaaggcttgcccatttgaccagaccactatcaatacagac
attgagctcctccctgtgaactcagcattgctgcagctcgtgggtgctcaggtccctgag
cagcagcctattactttgtgtagtggggttgaagacacaaagcattatgaggaagccaag
aaatgtgtagaagaattagcattgtacttaaaaccgctcagcagtgctagaggagtgggt
ctgaacagcactactcagagtgttctgagtcgcccaatgcagaggaagcttgtgactcta
gtccactgtcaactagtagaagaagaaggcaggattcgtgccatgagggcagctcgatct
ttaggtgaacgaacagttacagagctcattctccagcaccagaatcctcagcaactctct
tccaatctttgggcagcagtaagggctaggggatgccagttccttggaccagcaatgcag
gaggaagctttaaagttggttctgctggccttagaagatggttctgctttgtcaagaaaa
gtattggttctctttgtggtgcaaagattggagccacggtttcctcaagcctctaaaact
agcattgggcatgttgttcagctcctttatagagcctcctgtttcaaggtcaccaaacgt
gatgaagactcttctttgatgcagctgaaagaagaatttagaacctatgaagctctgcgg
cgagagcatgactcccagatagtgcagattgctatggaagcaggcttacgaattgcacca
gaccaatggtcctctttgctttatggagaccaatctcacaaatctcatatgcagtccatt
attgacaagttgcagaccccagcctcttttgcacagagtgttcaggaactaacaattgct
ctccagcggactggagacccagcaaacttgaaccgactaagaccccatttggagctgtta
gcaaacattgaccctagtccagatgctcctcctcctacttgggaacagctggaaaatggg
ctggttgctgtgcgtacagtggtacatgggctggttgattatatccagaaccacagcaaa
aaaggagcagatcagcagcagcctccacagcatagcaaatacaaaacatacatgtgtcga
gatatgaagcagagaggaggatgccctcgtggggccagctgtacatttgcacactcacag
gaggaactggaaaaatttcgtaaaatgaacaagcgcctggttccgagaagacccttgagt
gcctctttgggtcaacttaatgaggtgggcctgccttcagcagctatccttccagatgaa
ggtgcagtggatctccctagcagaaaacctcctgctctgccaaatggaattgtatcaaca
gggaatacagtaacacagcttattccacgaggaacagaccccagctatgattctagtctg
aaaccaggaaaaatagatcatctgagcagtagtgctcctggatcccctcctgacctgcta
gaatctgttcctaagagtatttctgccttacctgtgaatccacatcctatacctccaagg
gggccagcagatctgcctccaatgcctgttaccaaaccacttcagatggtacctcgaggt
tctcagttatatccagcacaacagacagatgtttattatcaggatcctcgaggaacagct
ccaccatttgaaccagcaccttatcagcagggtatgtattatactccaccaccacaatgt
gtgtcccgctttgtccgacctccaccatctgctcctgaacctgctcctccctacttggat
cattatccaccctacctccaagaacgtgttgtaaactctcagtatggcacacagccacag
cagtacccacctatatacccatctcactatgatggccgtcgagtgtaccctgctcagtct
tacacgagagaagagatattccgagaaagccctatacccattgagattccacctgcagca
gtaccatcgtatgtaccagaatccagagaaagataccaacagattgagagttactatcca
gtggctcctcatccaactcagatcagaccttcgtacctcagagaacctccttatagccgg
cttcctcctcctccccagcctcatcctagtctagatgaactacatcgccgacgaaaggaa
ataatggcccagctagaggaaagaaaggttatctctccacctccttttgcaccttcacca
accttgcctcctacctttcatccggaagaatttttggatgaagacttgaagatagctggg
aaatacaaaggaaatgattatagccaatactctccctggtcatgtgacaccatcggctcc
tacattggaaccaaagatgcaaaacccaaagatgttgtggcagcagggagtgtggaaatg
atgaatgtggagagtaaaggaatgagggaccagcgattagatcttcagagaagagcagca
gaaaccagtgatgatgacctcataccatttggagaccgaccaacagtgtctcggtttggt
gccatctcacgaacttccaaaactatgtatcagggtgctggtccaatgcaggctatggca
cctcagggagctcctacaaaatctattaacatttcagattatagtccatatggaacccac
ggtggctggggaggttctccatattcacctcatcaaaacataccttctcagggacacttt
ggtgagagggagagaatatctatgtcagaagtggccagtcatggaaaaccccttccatct
gctgagagagaacagctacgactagaattgcagcaattgaaccatcagattagccagcag
acccagctacgtggactagagagggaggcaaacaccctggcaggccagtcacagccccca
ccaccgccacctccaaaatggcctgggatgatctcaagtgagcagttgagcttggaactg
caccaggtggaaagggaaatcgggaagagaacacgggaactgagtatggaaaaccagtgt
tctctggacatgaaaagcaaactgaatacaagtaagcaagcagaaaatggacaaccagaa
ccacaaaacaaggttccggctgaggaccttacattgacattcagtgatgtaccaaatgga
tcagccttgacacaagagaatatcagcctcctatcaaacaagaccagctctctgaaccta
tcagaggaccctgagggaggaggggataataatgactcccagagatcaggagttactccc
agttctgctccttaa
DBGET
integrated database retrieval system
