KEGG   Nomascus leucogenys (northern white-cheeked gibbon): 100604383
Entry
100604383         CDS       T03265                                 
Symbol
SDC1
Name
(RefSeq) syndecan-1
  KO
K06257  syndecan 1
Organism
nle  Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle04512  ECM-receptor interaction
nle04514  Cell adhesion molecule (CAM) interaction
nle04820  Cytoskeleton in muscle cells
nle05144  Malaria
nle05205  Proteoglycans in cancer
nle05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:nle00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    100604383 (SDC1)
   04514 Cell adhesion molecule (CAM) interaction
    100604383 (SDC1)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    100604383 (SDC1)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    100604383 (SDC1)
  09174 Infectious disease: parasitic
   05144 Malaria
    100604383 (SDC1)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    100604383 (SDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:nle04131]
    100604383 (SDC1)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:nle04090]
    100604383 (SDC1)
   00535 Proteoglycans [BR:nle00535]
    100604383 (SDC1)
Membrane trafficking [BR:nle04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    100604383 (SDC1)
CD molecules [BR:nle04090]
 Proteins
  100604383 (SDC1)
Proteoglycans [BR:nle00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   100604383 (SDC1)
SSDB
Motif
Pfam: Syndecan Romo1
Other DBs
NCBI-GeneID: 100604383
NCBI-ProteinID: XP_003276026
Ensembl: ENSNLEG00000031569
LinkDB
Position
19:complement(19737858..19762324)
AA seq 317 aa
MRRAALWLWLCALALSLQPALPQIVATNLPPEDQDGSGDDSDNFSGSGAGTLQDITLSQQ
TPSTWKDMWLLTATPTSPEPTGLEATAASTSTLPAGEGPKEGEAVVLLEVEPGLTAREEE
ATPQPRETTPQPRETTQLPTTHQASTARATTAQEPTTSHPHRDMQPGHHETSAPAGPSQA
DLHTPHTEDGGPSATERAAEDGASSQLPAAEGSGEQDFTFETSGENTAVVAMEPDHRNQS
PVDQGATGASQGLLDRKEVLGGVIAGGLVGLIFAACLVGFMLYRMKKKDEGSYSLEEPKQ
ANGGAYQKPTKQEEFYA
NT seq 954 nt   +upstreamnt  +downstreamnt
atgaggcgcgcggcgctctggctctggctgtgcgcgctggcgctgagcctgcagccggcc
ctgccgcaaattgtggctactaatttgccccctgaagatcaagatggctctggggatgac
tctgacaacttctccggctcaggtgcaggtactttgcaagatatcaccttgtcacagcag
accccctctacttggaaggacatgtggctcctgacggctactcccacgtctccggaaccc
accggcctggaggctacagctgcctccacctccaccctgccagctggagaggggcccaag
gagggagaggctgtagtcctgctagaagtggagcctggcctcaccgcccgggaggaggag
gccaccccccaacccagggagaccaccccccaacccagggagaccacacagctcccgacc
actcatcaggcctcaacggccagagccaccacggcccaggagcctaccacctcccacccc
cacagggacatgcagcctggccaccatgagacctcagcccctgcaggacccagccaagct
gaccttcacactccccacacagaggatggaggtccttctgccaccgagagggctgctgag
gatggagcctccagtcagctcccagcagcagagggctctggggagcaggacttcaccttt
gaaacctccggggagaacacggctgtagtggccatggagcctgaccaccggaaccagtcc
ccagtggatcagggggccacgggggcctcacagggcctcctggacaggaaggaggtgctg
ggaggggtcattgccggaggcctcgtggggctcatctttgctgcgtgcctggtgggtttc
atgctgtaccgcatgaagaagaaggacgaaggcagctactccttggaggagccgaaacaa
gccaacggcggggcctaccagaagcccaccaaacaggaggaattctacgcctga

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