Nomascus leucogenys (northern white-cheeked gibbon): 100605026
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Entry
100605026 CDS
T03265
Symbol
CAPN1
Name
(RefSeq) calpain-1 catalytic subunit
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle04141
Protein processing in endoplasmic reticulum
nle04210
Apoptosis
nle04217
Necroptosis
nle04218
Cellular senescence
nle05010
Alzheimer disease
nle05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100605026 (CAPN1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
100605026 (CAPN1)
04217 Necroptosis
100605026 (CAPN1)
04218 Cellular senescence
100605026 (CAPN1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
100605026 (CAPN1)
05022 Pathways of neurodegeneration - multiple diseases
100605026 (CAPN1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nle01002
]
100605026 (CAPN1)
Enzymes [BR:
nle01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
100605026 (CAPN1)
Peptidases and inhibitors [BR:
nle01002
]
Cysteine peptidases
Family C2: calpain family
100605026 (CAPN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_7
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
100605026
NCBI-ProteinID:
XP_030667034
Ensembl:
ENSNLEG00000005535
LinkDB
All DBs
Position
4:84806293..84827813
Genome browser
AA seq
714 aa
AA seq
DB search
MSEEIITPVYCTGVSAQVQKQRAKELGLGRHENAIKYLGQDYEQLRVQCLQSGTLFRDEA
FPPVPQSLGYKDLGPNSSKTYGIKWKRPTELLSNPQFIVDGATRTDICQGALGDCWLLAA
IASLTLNDTLLHRVVPHGQSFQNGYAGIFHFQLWQFGEWVDVVVDDLLPIKDGKLVFVHS
AEGNEFWSALLEKAYAKVNGSYEALSGGSTSEGFEDFTGGVTEWYELRKAPSDLYQIILK
ALERGSLLGCSIDISSVLDMEAITFKKLVKGHAYSVTGAKQVNYRGQMVSLIRMRNPWGE
VEWTGAWSDSSSEWNNVDPYEREQLRVKMEDGEFWMSFRDFMREFTRLEICNLTPDALKS
RTIRKWNTTLYEGTWRRGSTAGGCRNYPATFWVNPQFKIRLDETDDPDDYGDRESGCSFV
LALMQKHRRRERRFGRDMETIGFAVYEVPPELVGQPAVHLKRDFFLANASRARSEQFINL
REVSTRFRLPPGEYVVVPSTFEPNKEGDFVLRFFSEKSAGTAELDDQIQANLPDEQVLSE
EEIDENFKALFRQLAGEDMEISVKELRTILNRIISKHKDLRTKGFSLESCRSMVNLMDRD
GNGKLGLVEFNILWNRIRNYLSIFRKFDLDKSGSMSAYEMRMAIESAGFKLNKKLYELII
TRYSEPDLAVDFDNFVCCLVRLETMFRFFKTLDTDLDGVVTFDLFKWLQLTMFA
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaggagatcattacgccggtgtactgcacaggggtgtcagcccaagtgcagaag
cagcgggccaaggagctgggcctgggccgccatgagaatgccatcaagtacctgggccag
gattatgagcagctgagggtgcaatgcctgcagagtgggaccctcttccgtgatgaggcc
ttccccccggtgccccagagcctgggttacaaggacctgggtcccaattcctccaagacc
tatggcatcaagtggaagcgtcccacggagctgctgtcaaacccccagttcatcgtggat
ggagccacccgcacagacatctgccagggagcactgggggactgctggctcttggcagcc
atcgcctccctcactctcaacgacaccctcctgcaccgagtggttccgcacggccagagc
ttccagaatggctatgctggcatcttccatttccagctgtggcaatttggggagtgggtg
gacgtggtcgtggatgacctgctgcccatcaaggacgggaagctagtgttcgtgcactct
gccgaaggcaacgagttctggagcgccctgcttgagaaggcctatgccaaggtaaatggc
agctacgaggccctgtcagggggcagcacctcggagggctttgaggacttcacaggcggg
gtcaccgagtggtacgagttgcgcaaggctcccagtgacctctaccagatcatcctcaag
gcgctggagcggggctccctgctgggctgctccatagacatctccagcgtcctagacatg
gaggccatcaccttcaagaagttggtgaagggccacgcctactctgtgaccggggccaag
caggtgaactaccgaggccagatggtgagcctgatccggatgcggaacccctggggcgag
gtggagtggacgggagcctggagtgacagctcctcagaatggaacaacgtggacccgtat
gaacgggagcagctccgggtcaagatggaggacggggagttctggatgtcattccgagac
ttcatgcgggagttcacccgcctggagatctgcaacctcacacccgacgccctcaagagc
cggaccatccgcaaatggaacaccacactctacgaaggcacctggcggcgggggagcacc
gcggggggctgccggaactacccagccaccttctgggtgaacccccagttcaagatccgg
ctggatgagacggatgacccggacgactacggggaccgcgagtcaggctgcagcttcgtg
ctcgcccttatgcagaagcaccgccgccgcgagcgccgcttcggccgcgacatggagact
attggcttcgcggtctacgaggtccctccggagctggtgggccagccggctgtacacttg
aagcgtgacttcttcctggccaatgcgtctcgggcgcgctcagagcagttcatcaacctg
cgagaggtcagcacccgcttccgcctgccacccggggagtatgtggtggtgccctccacc
tttgagcccaacaaggagggcgacttcgtgctgcgcttcttctcggagaagagtgctggg
accgcggagctggatgaccagatccaggccaatctccccgatgagcaagtgctctcagaa
gaggagattgacgagaacttcaaggccctcttcaggcagctggcaggggaggacatggag
atcagcgtgaaggagctgcggacaatcctcaataggatcatcagcaagcacaaagacctg
cggaccaagggcttcagcctagagtcatgccgcagcatggtgaacctcatggatcgtgat
ggcaatgggaagctgggcctggtggagttcaacatcctgtggaaccgcatccggaattac
ctgtccatcttccggaagtttgacctggacaagtcgggcagcatgagtgcctacgagatg
cggatggccattgagtcggcaggcttcaagctcaacaagaaactttacgagctcatcatc
acccgctactcggagcccgacctggcggtcgactttgacaatttcgtgtgctgcctggtg
cggctagagaccatgttccgatttttcaaaactctggacacagatctggatggagtcgtg
acctttgacttgtttaagtggttgcagctgaccatgtttgcatga
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