Nomascus leucogenys (northern white-cheeked gibbon): 100605030
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Entry
100605030 CDS
T03265
Symbol
LHX5
Name
(RefSeq) LIM/homeobox protein Lhx5
KO
K18493
LIM homeobox protein 5
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
100605030 (LHX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nle03000
]
100605030 (LHX5)
Transcription factors [BR:
nle03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
100605030 (LHX5)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Prok-RING_1
Orbi_VP3
Motif
Other DBs
NCBI-GeneID:
100605030
NCBI-ProteinID:
XP_030677320
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Position
10:complement(80652328..80661790)
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AA seq
402 aa
AA seq
DB search
MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
SSSSLKEGSLNSVSSCTDRSLSPDLQDALQDDPKETDNSTSSDKETANNENEEQNSGTKR
RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYAPGSNYDFFAHGP
PSQAQSPADSSFLAASGPGSTPLGALEPPLAGPHAADNPRFTDMISHPDTPSPEPGLPGA
LHPMPGEVFSGGPSPPFPMSGTSGYSGPLSHPNPELNEAAVW
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcactgtgccggttgcgagcggcccatcctcgaccgctttctgctgaacgtg
ctggaccgcgcgtggcacatcaaatgtgttcagtgctgcgagtgcaaaaccaacctctcg
gagaagtgcttctcgcgcgagggcaagctctactgcaaaaatgactttttcaggcgcttt
ggcaccaaatgcgccggctgcgcgcaaggcatctcgcccagcgacctggtgcgcaaggcc
cggagcaaagtctttcatctcaactgtttcacctgcatggtgtgtaacaagcagctgtcc
accggcgaggagctctacgtcatcgacgagaacaagttcgtgtgcaaagatgactacctg
agctcatccagcctcaaggagggcagcctcaactcagtgtcatcctgtacggaccgcagt
ttgtccccagacctccaggacgcactgcaggacgaccccaaagagacggacaactcgacc
tcgtcggacaaggagaccgccaacaacgagaatgaggagcagaactcgggcaccaagcgg
cgcggcccccgtaccaccatcaaggccaagcagctggagacgctcaaggctgccttcgcc
gccacgcccaagcccacgcgccacatccgcgagcagctggcgcaggagaccggcctcaac
atgcgcgtcatccaggtgtggtttcagaaccgacggtccaaagaacgccggatgaaacag
ctgagcgccctgggcgcccggaggcacgccttcttccggagtccgcggcgcatgcgtccg
ctgggcggccgcttggacgagtctgagatgttgggatccaccccgtacacctactacgga
gactaccaaggcgactactacgcgccgggaagcaactacgacttcttcgcgcacggcccg
ccttcgcaggcgcagtccccagccgactccagcttcctggcggcctctggccccggctcg
acgccgctgggtgcgctggagccgccgctcgccggcccgcacgccgcagacaaccccagg
ttcaccgacatgatctcgcacccggacacaccgagcccagagccgggcctgccgggcgcc
ctgcaccccatgcccggcgaggtgttcagcggcgggcccagcccgcccttcccaatgagc
ggcaccagcggctacagcggacccctgtcgcatcccaaccccgagctcaacgaggccgct
gtgtggtaa
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