Nomascus leucogenys (northern white-cheeked gibbon): 100605877
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Entry
100605877 CDS
T03265
Symbol
SCAF4
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nle03021
]
100605877 (SCAF4)
03041 Spliceosome [BR:
nle03041
]
100605877 (SCAF4)
Transcription machinery [BR:
nle03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100605877 (SCAF4)
Spliceosome [BR:
nle03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
100605877 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
100605877
NCBI-ProteinID:
XP_003263898
Ensembl:
ENSNLEG00000003569
UniProt:
G1QTY1
LinkDB
All DBs
Position
25:complement(17045703..17108303)
Genome browser
AA seq
1147 aa
AA seq
DB search
MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKVSSEPPTQAAPNSVPAVPQL
PSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQ
PSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTA
TVPAAAAPTAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLP
PNGQMPGFGLLPTPPFPPMAQPVIPPTPAVQQPFQASFQAQNEPLTQKPHQQEMEVEQPC
IQEVKRHMSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQE
RRDREKERERRQKGLPQVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMI
PPRGCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVELGVT
YIPWDKVKPEELESFCEGGMLDSDTLNPDWKGIPKKPENEVAQNGGAETSHTEPVSPIPK
PLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPP
PPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLS
IGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVI
GLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMP
PPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQQPQPQPPQQP
QQQQQQPPPSQQPPPTQQQPQQFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERYGNRN
DDRDNSNRDRREWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEEARGKEK
PEVTDRAGGNKTVEPPISQVGNADTASELEKGESEAAVLKPSEELPAEATSSVEPEKDSG
SAAEAPR
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtcaacgccttcaaccaggagctcttttcgcttatggatatgaaacctccc
atctctagagccaagatgattctcatcactaaagctgctattaaagctattaagctttat
aagcatgtagttcaaatagtagaaaagttcatcaaaaagtgtaaaccagaatacaaggtt
ccgggattatatgtaattgactcaattgtgcgacagtctcgtcatcagtttggaactgat
aaagatgtttttgggccaagattctctaaaaacataactgccacattccaatatttatat
ctttgtccatctgaagataagagtaaaatagttcgtgtgctgaacctttggcaaaaaaat
ggagtgttcaaaattgaaattattcagcctcttttggacatggcagcaggaaccagtaat
gcagccccagtagcagaaaatgttaccaataatgaaggctcacctccacctccagtaaaa
gtttcttctgaacctcccacacaagccgctccaaactccgtcccagctgtaccacagttg
cccagctctgatgcttttgctgctgtggctcagctgtttcagacaactcaaggccaacag
cttcagcagatccttcagacttttcaacagcctccaaaaccacagtctcctgcccttgac
aatgctgtgatggctcaggttcaggctattacagctcagttaaagacaactcctacacaa
ccatctgaacaaaaagctgctttccccccacctgaacagaaaactgcatttgacaagaag
ttgcttgatagatttgactatgatgatgagccagaagctgtggaagaatcaaagaaagag
gataccactgccgtcaccacaacagcacctgctgccgctgtaccccctgcacccaccgcc
accgtgcctgctgctgctgcacccactgctgcctctcctcctcctccacaggcaccattt
ggctttcctggagatggcatgcagcagccagcatacacacagcatcaaaatatggatcag
tttcagccacgaatgatgggaatacaacaggatccaatgcaccatcaggttccacttcct
cctaatggacaaatgccaggatttggacttcttcctacacctccatttcctcccatggct
cagcctgtgattcctccaactccagcagtgcagcagcctttccaagcttcttttcaggca
caaaatgaaccacttacacagaagccacatcagcaggaaatggaagtagaacagccttgt
attcaagaggttaagcgacatatgtctgataacagaaagtcaagatctaggtcagcatcc
aggtcaccaaaaaggaggcgatccagatctggttctagatctcgaaggtctcggcatcga
cgttctcggtctcggtccagggatagacgccgacattctcctcgatctcgatcccaagaa
agacgagatcgagaaaaagagagagaacgtcgacaaaaaggcctccctcaagtgaaaccg
gaaactgcaagtgtttgcagtactaccctctgggtggggcagctggacaaaagaactact
cagcaggatgttgccagtctcttggaagagtttggtccaattgaatcaattaatatgatt
cctcccaggggttgtgcctatattgttatggttcataggcaagatgcctatcgtgccctg
cagaaactgagccgaggaaactataaagtgaaccagaaatccataaagattgcctgggcc
ttaaacaaaggaataaaggcagattataagcagtattgggatgtagaacttggtgttact
tatattccatgggacaaagttaagcctgaggaactggagagtttttgtgaaggaggaatg
ttggacagtgacacacttaacccagattggaaaggaattcctaagaagcctgaaaatgaa
gttgctcaaaatggaggtgctgaaacctcacacacagaaccagtatcacccatacctaaa
ccattacctgtgcctgtccctcctattcctgttcctgcacctataacagtgccacctcca
caggtcccaccacatcaaccgggtccacctgtagttggtgctctccagccacctgctttc
acgcctcctctgggaataccacctccaggctttggtcctggtgttcctcctccccctcct
cctccaccatttttgcgcccaggattcaacccaatgcatttacccccaggttttctgcct
cctggacccccacctcctataactccaccagtatccattcctcctcctcacactccacca
ataagcatcccaaactctactatcgctggtataaatgaagacactacaaaagacttatct
attggaaatcccattccaacagtggtgtctggggctagaggaaacgccgagtctggtgac
agcgtgaaaatgtatggctctgctgtgccacctgctgcacccacgaatctgcccacccct
cctgtaacccagcctgtttcacttcttggcactcaaggagttgcccctggtcctgtaatt
ggacttcaggcaccatctactggtcttcttggcgcccggcctggtctcatccctctccag
cgccctccaggaatgcccccacctcacttacagcggttccctttgatgccgccccgtccc
atgccaccgcacatgatgcacagaggcccacctccaggaccagggggctttgcgatgcct
ccacctcatggaatgaaaggtcccttcccaccgcatggcccctttgttaggcctggtgga
atgccagggctcgggggcccagggccaggcccagggggtcctgaagacagagatggaagg
caacagccgccgcagcagccacagcagcagcagccacagccgcagccaccccagcaacca
cagcagcagcagcagcagccgccaccatcacaacagcctccaccaacacagcagcagcca
cagcagtttagaaatgataacaggcagcagttcaattcaggtagagaccaagaaaggttt
ggaagaagatcttttggaaatagggtggaaaatgaccgggaacggtatgggaaccgtaat
gatgatagagataatagtaaccgtgacaggagagagtggggaagaaggagccctgaccgg
gacaggcacagagacttggaagagagaaatagacgctctagtgggcatcgagacagagag
agagattctagagatagagagtctcgtagagagaaggaagaagcccgaggaaaggagaag
cctgaggtgacagacagggcaggtggtaacaaaaccgttgaacctcccattagccaagtg
ggaaatgcagacactgcttcagaacttgagaagggggagtctgaggctgcagtcctaaag
ccttctgaagagttacctgctgaggctacctcatccgttgaacccgaaaaggattctggc
tcagcagcagaggctcctcgttag
DBGET
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