Nomascus leucogenys (northern white-cheeked gibbon): 100606513
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Entry
100606513 CDS
T03265
Symbol
SETX
Name
(RefSeq) probable helicase senataxin isoform X1
KO
K10706
senataxin [EC:5.6.2.-]
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100606513 (SETX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nle03021
]
100606513 (SETX)
Transcription machinery [BR:
nle03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100606513 (SETX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_19
UvrD-helicase
AAA_30
AAA_22
Viral_helicase1
ResIII
nSTAND3
SLFN-g3_helicase
AAA_16
Helicase_RecD
UvrD_C_2
Motif
Other DBs
NCBI-GeneID:
100606513
NCBI-ProteinID:
XP_030673942
Ensembl:
ENSNLEG00000012839
LinkDB
All DBs
Position
8:complement(108396790..108492044)
Genome browser
AA seq
2705 aa
AA seq
DB search
MSTCCWCTPGGGSTIDFLKRYASNTSSGEFQTADEDLCYCLECVAEYHKARDELPFLHEV
LWELETLRLINHFEKSMKAEIGDDDELYIVDNNGEMPLFDITGQDFENKLRVPLLEILKY
PYLLLHERVNELCVEALCRMEQANCSFQVFDKHPGIYLFLVHPNEMVRRWAILTARNLGK
VDRDDYYDLQEVLICLFKVIELGLLESPDIYTSSVLEKGKLILLPSHMYDTTNYKSYWLG
ICMLLTILEEQAMDSLLLGSDKQNDFMQLILHTMKRQADDDSVDPFWPALHCFMVILDRL
GSKVWGQLIDPIDAFQTIIDNASYNREIQHIRNSSVRTKLEPESYSDDMVTCSQIVYNYN
PEKTKKDSGWRTAICPDYCPNMYEEMETLASVLQSDIGQDMRVHNSTFLWFIPFVQSLMD
LKDLGVAYIVGVVHHLYSEVKEVLNQTDAVCDKVTEFFLLILVSVVELHRNKKCLHLLWV
SSQQWVEAVVKCAKLPTTAFTRSSEKSSGNCSRGTAMISSLSLHSMPSNSVQLACVQLIR
SLLKEGYQLGQQSLCKRFWDKLNLFLRGNLSLGWQLTSQETHELQTCLKQIIRNITFKAP
PCNTFVDLTSTCKTSPASYNKEESEQIGKTSRKDTHCLEASSPTFSKEPMKVQDSVLIKA
DNTIEGDDNEQNHIKDVKLEDHLSAGSCLEQSRKNIVTERAEGQIKISTRKQRSVKEMSS
YTPKDCTSRNGPERGCDRGIIVSTCLLTDSSTDSLEKVSTSNEDFCLKDDALAKTSKRKT
KVQKDEICAKLSHVIKKQHRKSTLVDNAINLDENLTASNIESFYSRKDTGVQKGDGFIHN
LSSDPSGVLDDNKNGEQKSQNNVLPKEKQLKNEELDIFSSHENNCKIQEFHVDKDLIPFT
EMTSTSEKKSSPFKDLMTVPESRDEEMSNSTNVIYSNLIREQAPGISPKSDTLTDSQIDR
DLHKLSLLAQASVITFPSNSPQNSSQLQRKVKEDKRCFTANQNNGDTSRGHVIIISDSDD
DDDDEGILSLEKLTKQDKICLEKERPEQHVSTVNSKEEKNPIKEVKTESLFQFEESDSQY
FEFESSFEVFSVWQDHLDNNSVQDGEKKCLAPIANTTNRQGCTDYVSEVVKKGAEGIEEH
TRPQSIPVEEFCEIEVKKPKRKRSEKPMAEGPVRPSSSVRNEGQSDINKRDLVGDDFKSI
DRRTSSPNSSIQRATAVSQKKSSKLCTCTEPVRKVPVSKTPKKNHSDAKKGQNRSANYLS
CRTTPAIVPPKKFRQCPEPTSTAEKLGLKKGPRKAYELSQRSLDCVAQLRDHGKTVGVVE
TRKKTKLISQNLSVRNNKKLLTSQELQMQRQIRPKSQKNRRRLSDCESTDVTRAGSHTAQ
NSDIFVPEPDRSDYNCTGGTEVLANSNRKQLIKCMPSEPETIKAKHGSPATGDACPLNQC
DSVVLNGTIPTNEVIVSTSEDPLGGGDPTAHHIEVTTLKEGEPDSSSDAEEDNLFLTQND
PEDMDLCSQIENDNYKLIELIHGKDTVEVEEDSVSRPHLESLSGTKCKYKDCLETTKNRS
EYCPKHSEVKAADEDVFRKPGLPPSASKPLRPTTAKIFSSKSTSRIAGLSKSLETSSALS
PSLKNKSKGIQSILKVPQPAPLIAQKPVGEMKNSCNVLHPQSPNNSNRQGCKVPFGESKY
FPSSSPVNILLSSQSVSDTFVKEVLKWKYEMFLNFGQCGPPASLCQSISRPVPVRFHNYG
DYFNVFFPLMVLNTFETVAQEWLNSPNRENFYQLQVRKFPADYIKYWEFAVYLEECELAK
QLYPKENDLVFLAPERINEEKKDTERNDIQNLHEYHSGYVHKFRRTSVMRNGKAECYLSI
QTQENFPANLNELVNCIVISSLVTTQRKLKAMSLLGSRNQLARAILNPNPMDFCTKDLLT
TTSERIIAYLRDFNEDQKKAIETAYAMVKHSSSVAKICLIHGPPGTGKSKTIVGLLYRLL
TENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDELMKKIILEFKEKCKNKKNPLGNCGDI
NLVRLGPEKSINNEVLKFSLDSQVNHRMKKELPSHVQAMHKRKEFLDYQLDELSRQRALC
RGGREIQRQELDANISKVSKERQELASKIKEVQGRPQKTQSIIILESHVICCTLSTSGGL
LLESAFRGQGGVPFSCVIVDEAGQSCEIETLTPLIHRCNKLILVGDPKQLPPTVISMKAQ
EYGYDQSLMARFCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVYNRNLKTNR
QTEAIRCSSDWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEIIKLIKDKRKDVSFRN
IGIITHYKAQKTMIQKDLDKEFDRKGPAEVDTVDAFQGRQKDCVIVTCVRANSMQGSIGF
LASLQRLNVTITRAKYSLFILGHLRTLMQLLPRSFCVHVNHSPFFSPEPKYLHWALKENQ
HWNQLIQDAQKRGAIIKTCDKNYRHDAMKILKLKPVLQRSLTHPPTIAPEVSRPQGGLPS
SKLDSGFAKPSVAASLYHTASDSKETTLTVTSKDPERPPVHDQLRDPRLLKRMGIEVKGG
IFLWDPQPSSPQHPGATPPSGEPGFPVVHQDLSHAQQPAAVVVALSNHKPPVQGEPPAAS
PEASTCQSKCDDPEEELCHRREARAFSEGEQEKCGSETHHTRRNSRWDERRLEQEDSSSK
KRKLL
NT seq
8118 nt
NT seq
+upstream
nt +downstream
nt
atgagcacatgttgttggtgtacgccaggtggtggttccaccattgacttcctaaagcgc
tatgcttccaacacttcgtccggtgaatttcaaacagccgacgaagacctctgctactgc
ttggagtgtgtggctgagtaccacaaagcaagagatgaattgccattcttgcatgaggtt
ttatgggaattagaaaccttacgtctcataaatcactttgaaaaatccatgaaggcagaa
attggagatgacgatgagttatatatagtagacaacaatggagagatgccactgtttgac
atcactgggcaagactttgaaaataagcttcgagttcctcttcttgaaatactgaaatat
ccttacttgcttctacatgaacgtgttaacgagttatgtgttgaagcactttgtcggatg
gaacaagccaattgctcctttcaggtgtttgacaaacatccagggatctatttgtttttg
gtccatcccaatgaaatggttcggcgttgggctatcttgactgcaagaaacttggggaaa
gtggacagagatgattattatgacttacaagaagttttaatttgcctttttaaagtcatt
gagttggggcttttagagagtccagacatttatacttcttctgtcctagagaagggtaaa
ctgattcttctgccctcacacatgtatgatactaccaactacaaaagctattggttaggt
atttgcatgttgctgaccattcttgaggaacaagccatggattccctattgttgggctca
gacaaacaaaatgattttatgcaattgatacttcacactatgaagaggcaagcagatgat
gatagtgtggatcctttctggcccgcattacactgttttatggtgattctggatcgcctt
ggatctaaggtctggggtcaacttattgatcctattgacgcatttcaaaccattatcgac
aacgcaagctacaatagagagatccaacatatacggaacagctctgtaaggaccaagtta
gaaccggagtcctattcggatgatatggtgacttgcagccagatcgtatacaattataat
cctgaaaagaccaaaaaggattctggatggagaacagccatttgcccagattattgtcct
aacatgtatgaagaaatggaaacattagccagtgtacttcagtcagatattggtcaagac
atgcgtgttcataacagcacatttctatggttcatcccttttgtccagtccctcatggat
cttaaggatttgggtgtggcttacatagtaggggttgttcatcatctgtactctgaagtc
aaagaagtcctcaaccaaacagatgccgtgtgtgacaaagtcactgaattttttcttcta
attttggtatcagtggtcgaactgcatagaaataaaaaatgtttgcatttgctgtgggtt
agttcccagcaatgggtggaagccgtcgtcaaatgtgccaagcttcctaccactgcgttt
acacggagttctgagaaatcatctggaaattgctccagaggaacagcaatgatatcatca
ctgtcgttgcattccatgccatctaactctgtacaacttgcttgtgtgcagctgattaga
agtctccttaaagaaggttatcagcttgggcagcaatctctttgcaagcgattctgggat
aagctcaacttattccttagaggaaatttatctctaggttggcagttgactagtcaggaa
acccatgagctacaaacttgtttaaagcaaattattagaaacataacattcaaagcacct
ccatgtaacacttttgtggatctgacttctacatgtaaaacctctcctgcatcttataat
aaagaagaaagtgaacaaatagggaagacgtctagaaaagatacgcattgtttggaagct
tccagcccaacattttctaaagaaccaatgaaagtgcaagacagtgtattgatcaaagca
gataacactatagaaggtgacgataatgagcaaaatcatataaaggatgtgaaactagaa
gaccatctctcagctgggtcatgcttagagcagagtcgtaaaaacattgttactgaaaga
gctgaaggtcaaattaaaataagtacaaggaagcagaggtctgtaaaagagatgtcttca
tatacaccaaaggattgtacttcaagaaatggtccagaaaggggatgtgacagaggaata
atagtatcaacatgtttgttgactgattctagcactgattctttggaaaaagtgtccaca
tcaaatgaagatttctgtttaaaggatgatgctcttgctaaaacctcaaaacgaaaaact
aaggtacagaaagatgaaatatgtgcaaagttatcacatgtaataaagaagcaacacagg
aagagtactttggtcgataatgccatcaatttagatgaaaatttgactgcatctaacatt
gagagtttctattcaaggaaagatacaggagttcagaaaggagatggtttcatacacaat
ctttcttcagaccctagtggtgttctggatgataataagaatggagaacaaaaatctcaa
aacaatgtattgccaaaagagaaacagttaaagaatgaagagttagatattttctcttcc
catgaaaacaattgtaaaatacaggaatttcatgttgacaaagatttgatcccctttaca
gaaatgaccagtacttcagagaagaaatcatctccctttaaagatcttatgactgtacct
gaatcaagagatgaggagatgagtaatagtaccaatgtgatttattctaacttgataaga
gaacaggcccctggcatcagtcctaaatctgacaccttaacggattctcagatagacaga
gaccttcacaaattatctttactagctcaagccagtgttattacatttccatccaattca
cctcagaactcatcgcagctgcaaaggaaagtaaaagaagataaaagatgtttcacagct
aaccaaaataatggagatacctcccgtggacatgttattattatttcagattctgatgac
gatgatgatgatgaaggaatcctgagtcttgagaaactcactaaacaggacaaaatatgc
cttgagaaggaacgtccagagcagcacgtttcaacagttaatagtaaggaggaaaagaat
ccaataaaggaagtaaagacagagtctctttttcagtttgaggaatctgattctcagtat
tttgagtttgaaagttcatttgaagtgttttcagtttggcaagatcatctagacaataat
tcagttcaggatggtgagaaaaaatgtttggctcctatagccaataccacaaatcgtcag
ggttgtacagattatgtatctgaagttgttaaaaaaggagcagagggcattgaagaacac
acaagaccacagagtattcctgttgaggaattttgtgaaattgaagtaaaaaagcctaag
agaaaacgatctgaaaaaccaatggctgaaggtcctgtgaggccttcatcttctgtcaga
aatgagggccagtctgatattaataagagagatcttgttggagatgattttaaaagtata
gatagaaggacttcaagtcccaattcaagtattcagagagccactgcggtttcacaaaag
aagtcttcaaagctttgtacttgtacagaacccgtcaggaaagttccagtttctaagacc
cctaagaaaaatcattcagatgccaaaaaaggacagaatagaagtgcaaattacctaagt
tgtagaacaactcctgctatagtgccaccaaagaaatttcgtcagtgtcctgagccaact
tcaacagctgagaaacttggcctgaaaaagggtcctcgtaaggcatatgagttgtcccag
cgatctttggattgtgtagctcaattacgtgatcatggcaaaactgttggagtagttgaa
acccgaaaaaagactaaattaatttctcagaacctgtctgtcagaaataataagaagctg
ctgactagtcaagaacttcagatgcaaaggcagatcagacccaaatcacaaaaaaataga
cgaagactttctgattgtgaaagtacagatgttacaagagcagggtcacatacggcacag
aattctgacatatttgtaccggaacctgataggtcagattataattgtacaggaggaact
gaggtactcgccaacagtaacagaaaacagttaataaaatgcatgccttctgaaccagaa
accataaaagcaaaacatgggtctccagcgactggtgatgcttgccctttgaaccagtgt
gattctgtagtgttaaatggaacaataccaacaaatgaagtaattgtctctacttcagag
gaccctctgggtggaggtgatccaacagcacatcatatagaggtgacaactttgaaagag
ggagagcctgactccagcagtgatgcagaggaagataacttatttttaacacaaaatgat
cctgaagatatggatttatgttcacaaatagagaatgacaattataaattaattgaacta
attcatggaaaagatacagttgaggttgaagaagattctgtaagtcggcctcatttggaa
tctttgagtggcacaaagtgtaagtacaaagattgtcttgaaaccacaaaaaaccggagt
gaatactgcccaaaacactctgaagtgaaagcagcagatgaagatgtatttcgtaaacct
ggcttgcctccttctgcatctaaacctttgagacctaccactgctaagatttttagctca
aagagtacttcccgaattgctggtctttctaaatctttggaaacttcttcagcactttca
ccatctctaaaaaataagtcaaaggggatacagtcgattttgaaagtaccacagccagct
cccctcatagctcagaagccagtgggtgaaatgaagaattcgtgcaatgttcttcatcct
cagtctccgaataattccaacaggcaaggttgcaaagttccatttggtgaaagcaaatat
tttccatcttcctctccagtaaacattctcttgtcatcacagtctgtctctgacaccttc
gttaaagaggtcttaaaatggaaatatgaaatgtttttgaactttggtcagtgtgggccc
cctgcaagtctttgtcagtccatctcaagacctgtgcctgtcagatttcacaattatgga
gattattttaatgtttttttccctttgatggtattgaatacttttgaaacagtggcacag
gaatggctcaactctccaaatagagagaatttctatcaattgcaagtacgaaaatttcct
gctgattatataaaatactgggagtttgcagtttatctggaagaatgtgaactggctaaa
cagctttatccaaaggaaaacgatttggtgtttttagctcctgagagaataaatgaagag
aagaaagatacagagagaaatgacatacaaaatctccatgaatatcattctggttatgtt
cataaatttcgccgcacttcagtcatgcgtaatgggaaagctgagtgttacctttccatc
cagactcaagagaacttcccggccaatttaaacgaacttgtgaattgtatcgtaatcagt
tctctggtaactacacaaaggaagttgaaagccatgtctctgttgggtagtcggaaccaa
ctggctagagctattctgaatccaaaccctatggacttctgtacaaaagatttactaact
acaacatctgagagaattattgcgtacttaagagatttcaatgaagaccaaaagaaagca
atagaaactgcgtatgctatggtgaaacactcatcatcagttgccaaaatctgcttgatt
catggaccacctggaacaggaaaatcaaaaactattgttggcctcctctatcgtctactg
acagagaaccagaggaaggggcattcagatgaaaactccaatgccaaaatcaaacaaaac
cgtgtcctcgtgtgtgcaccttccaatgcagctgttgatgaactcatgaaaaaaattatc
cttgaattcaaagaaaaatgtaaaaacaagaagaatcctttaggaaactgtggagatata
aatttagtacgactgggtccagaaaagtctattaataatgaggttctaaagttcagtttg
gacagccaagtaaaccacagaatgaaaaaagagttaccttctcatgttcaggcgatgcat
aaaagaaaggaatttctagattatcagttggatgagctttcccggcagcgagctctatgc
cgaggtggacgggaaatacagaggcaagaattagatgcaaacatttccaaagtttctaag
gaaaggcaggaacttgcttctaaaattaaagaggttcaaggacgcccacagaaaacacag
agtatcatcatcttagagtcccatgtcatctgctgcacattgagcacaagtggtggttta
ctacttgagtctgctttccgtgggcaagggggagtccccttcagctgtgtcattgttgat
gaggctggacagtcttgtgaaattgagactctcactccactcatccatcgctgcaacaag
ctcatcctagtaggagatcctaagcagctccctcccacagtcatctctatgaaagcacag
gagtatggctacgaccagtcactgatggctcgcttctgcagactgctggaagagaatgta
gaacacaacatgatcagcaggctgcccattctacagctcactgttcagtacaggatgcat
ccggacatatgcctcttcccttctaattatgtttataacagaaacttaaaaacaaataga
cagacagaagccattcgatgttcatcagactggccatttcagccataccttgtgtttgat
gtcggggatggttcagaaagacgggataatgactcgtatataaatgttcaagaaataaaa
ctggtgatggaaataattaagcttattaaagacaaaagaaaggatgttagttttcgaaac
attggcataataacgcattacaaggcccagaagacaatgattcagaaggatttggacaaa
gagttcgatagaaaaggaccagcagaagtagatactgtggatgcattccagggtcggcag
aaggattgtgttattgttacatgtgtcagagcaaatagcatgcaaggttcaattggattc
ctggcaagtttgcagagattgaatgtcaccatcacacgagccaagtacagcctcttcatc
cttggacatttgaggaccctgatgcaacttcttcctaggagcttttgtgtacacgtgaac
cattcgccttttttcagcccagaacccaagtatctacactgggctctcaaggaaaaccag
cattggaatcagctgattcaggatgctcagaagcgtggtgccattattaagacctgtgac
aaaaactatagacatgatgcaatgaagattctgaaactcaagcctgtgctgcagagaagt
ctcactcaccctcccaccatagccccagaggtgtccagaccccagggtggtttgcccagc
agcaagctggacagtggatttgccaagccatctgtggctgcttctctataccacacagcc
tctgactccaaggaaactactcttactgttacttcaaaggaccctgaaagacctcctgtt
catgaccaacttcgggacccacggctgctgaagaggatgggcattgaggtcaaaggagga
atattcctatgggatccacaaccctcgagcccccagcatcctggagcaacacctccttca
ggcgagccgggcttccctgtcgttcaccaggacctgagccatgcacagcagcccgctgct
gtagtggttgctctgagcaaccacaaacctcccgtgcagggcgaacctccagctgccagt
cccgaggcttccacgtgtcagagcaaatgtgatgacccggaagaggagctctgtcacagg
agagaggccagggctttcagtgaaggggagcaggagaagtgtggttccgagacccatcac
accaggaggaactctaggtgggacgagaggagactggagcaggaggacagcagttccaag
aaaagaaagcttttatag
DBGET
integrated database retrieval system
