Nomascus leucogenys (northern white-cheeked gibbon): 100606955
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Entry
100606955 CDS
T03265
Symbol
DDX60L
Name
(RefSeq) probable ATP-dependent RNA helicase DDX60-like isoform X2
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nle03019
]
100606955 (DDX60L)
Enzymes [BR:
nle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100606955 (DDX60L)
Messenger RNA biogenesis [BR:
nle03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
100606955 (DDX60L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN-like_DDX60
DEAD
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
100606955
NCBI-ProteinID:
XP_003257994
Ensembl:
ENSNLEG00000006565
LinkDB
All DBs
Position
7b:complement(88733336..88849572)
Genome browser
AA seq
1706 aa
AA seq
DB search
MALKDHAVFFREMTQLILNEMPRAGYSSILNDFVESNFFVIDGDSLLATCLGVKSFKWGQ
NLHFFYLVECYLVDLMSNGGQFAIVFFKDAEYAYFDFPELLSLRTALILHLQHNTSIDVQ
TEFSGCLSQDWKLFLEQYYPYFLIVSEEGLSDLQTYLFNFLIIHSWGMKVNVVLSSGHES
DTLRLYAHTMESTDRNQTFLKENETVIQSAYKSLIQHLEERRVLALAPHFEHLKWNDMME
EAYQTLFLLQHLWSEGSDIQRVLCVTSCSLSLRMYHRVLVHSNCLSLQEVEDFCRLRCLC
VAFQLHLPLSQRACSRVITCSWIGNSDSFLKMNKWCEHFILSNLNAFGCWNLNLNHVSDL
YDEQLLKNIAFYYEFENTQEPHLNLGDSIRRDYEHLWNVVSHLVKEFNVGKSFPLRTTRR
HFLRQEKSFIQEISLEKMPSAGFIPMTSAVIDEFVGDMMKDLPILKSDDPVVPSLFKQKT
SDELLHWHAQRLLSDDYDRSKCHVDEQSRDPHVLDFLKKSQDYQQFYGKSLESISTKVIV
TQTTRPEEDSSGASGEILQNTKPHQITKKSKKKSFLKEDQNKAQQMDDLLFSIEEEMKKN
LHSGIRKLEDYLTSCASNSVKFGVEMLGLTVCFKAWKEHCRGEGKISKDLSIAVQMMKRI
HSLLERYSEILEAEHHQYIAKCLKYLGFNDLANSLDPTLIGDDKNKKKYSIDIGPARFQL
QYMGHYLIRDERKDPDPRVRDFIPNAWQRELLDVVDKNESAVIVAPVSAGKTYASYYCME
KVLRESDDGVVVYIAPAKSLVGQVAATVENRFTKTLPAGRTLCGAFTRDYGHNVLNCQVL
ITVPECFEILLLAPHRQKWVERIRYVIFDEVHYLGREVGAKFWELLLVIIRCPFLVLSAT
INNPNLLTKWLQSVKQYWKQADKIIEEKFISEKQADKCLNFLQDNSYKNQSYEVRLVLCG
ERYNDLEKHICSVKHDDVYFDHFHPFAALTTDIIEKYGFPPDLTLTSQESIQLYDTMAQV
WETWPRAQALCPEEFILFKNKIVIKKLDARKYEENLKAELTNWIKNGQVKKVKRVLKNLS
PDSLSSSKDMVKMFPLLVEKLRQMDKLPAIFFLFKNDDVGKRAGSVCTFLEKTETKSHPH
TECHSYVFGIDEVLEKVGKTQKRIIKKNPKKAEKLERKQMYIAEYINFLENLKILEISED
CTYADVKALHTEITRNKGSTLDRVLKRVRLTRHGEELKALAQRGIGYHHSGMYFKEKEFV
EILFVKGLIRVVTATETLALGIHMPCKSVVFAQDSVYLDALNYRQMSGRAGRRGQDLLGN
VYFFDIPLPKIKRLIASSVPELRGQFPLSITLVLRLMLLASRREDPEDAKAKVLSVLKHS
LLSFKRQRAMETLKLYFLFSLQLLIKEDYLNKKCNPKKFAGLASYLHGHEPSNLVFVNFL
KRGLFHNLCKPAWKGSRQFSQDVMEKLVLVLANLFGRKYIPAKFQNANLSFSQSKVILAE
LPEDFKAALHEYNLAVMKDFASFLLIASKSVNMTKEYQLPLSRIKFTGKECEDSQLVSHL
MSCKEGRVAISPFVCLSGNTDNDLLRPETINQVILRTIGVSGTQAPLLWPWKLDNRGRRM
PLNAYVLNFYKHNCLTRLDQKNGMRMGQLLKCLKDFAFNIQAISDSLSELCENEHDNVVL
AFKQLSQTFYEKLQEMQTQMSQNHLK
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atggcgttaaaggatcatgcagtattttttagggaaatgacacagttaattttgaatgaa
atgccaagagctgggtattccagcatattaaatgattttgtggaatctaatttttttgtg
attgatggagattccttgcttgccacatgcctgggtgtaaaatcattcaagtggggacag
aatctccactttttctatctggttgaatgctatcttgtggatcttatgagtaacggagga
caattcgccatagttttcttcaaggatgctgaatatgcatattttgattttcctgaactt
ctttcattgagaactgctttaattctccaccttcaacacaatactagcattgatgtacaa
acagagttttctggatgcttatcacaagattggaagttattcttggaacagtattacccg
tattttctgatagtttcagaggaaggcctgagtgatttacaaacgtatctttttaacttc
ttaattatacattcctggggaatgaaagtcaacgttgtgctttcatcagggcacgaatct
gatactctcagactttatgcacatactatggaaagcacagacagaaaccaaacttttttg
aaggagaatgaaacagtgattcagagtgcatataaaagcctcatacaacacttagaagaa
agaagggtgttagcattagcccctcattttgaacatttgaaatggaatgatatgatggaa
gaggcatatcagactctatttctgcttcagcacctatggtcagaaggatcggacatccag
cgtgttctctgtgtcacttcatgttcactgtccttgagaatgtaccatcgcgtcttagtg
cacagtaattgcctatccctgcaggaggtggaagatttctgcagactgcgttgcctctgt
gtggcttttcaactccacttacccctttctcagagagcttgttctcgagtcatcacatgc
tcttggattgggaacagtgattctttcttaaaaatgaacaagtggtgtgaacatttcatt
ttaagcaacttaaacgcttttggatgctggaatctgaatttaaatcatgtttctgacttg
tatgatgagcaattgttaaagaatattgccttctactatgaattcgaaaatactcaagaa
ccacatttgaatttgggagattccattaggagggattatgaacacctgtggaatgttgtg
tcacacctggttaaagaatttaatgttggaaagtcttttcctctgagaacaacaagaaga
cattttcttagacaagagaaatcattcattcaagaaatctccttggaaaagatgcctagt
gcgggttttattccaatgacatctgctgtaattgatgagtttgttggagatatgatgaag
gatttgcctattctaaagagtgatgatccggttgttccttcactgtttaaacaaaagaca
tctgatgaacttctgcactggcatgctcaaagactccttagtgacgactatgacaggagc
aaatgtcacgttgatgaacaatcgagagatcctcatgttcttgatttcctgaaaaagagt
caggattatcagcaattttatgggaaatcgttagaatcaatctctacaaaagtcattgtg
actcaaactactcggccagaggaggattccagtggtgccagtggtgaaatattacagaat
accaaaccccaccaaattaccaaaaagagtaagaaaaagtcatttctcaaagaagatcag
aacaaagctcagcaaatggatgatctgctattttctattgaagaggagatgaagaagaat
ttacattctggaataaggaaattggaagattatttgacatcatgtgcaagtaattcagtg
aaatttggagttgaaatgttaggattaactgtctgctttaaagcatggaaagaacattgc
cgaggtgaaggcaaaatttcaaaagatttaagtatagctgttcaaatgatgaaaaggatt
cattcactcctggagagatactcggaaattttggaagcagaacatcatcaatatatagct
aaatgccttaaatatttaggctttaatgatttggcaaactctttggatccaactctgata
ggagatgacaaaaataagaagaaatattcgattgacattggaccagctcggtttcaactc
caatacatgggccattacttgatacgagatgaaagaaaagatccggatcccagggtccgg
gattttattcccaatgcatggcagcgagaactcctcgatgtggtggataagaatgagtca
gcagtgattgttgccccagtgtcagcaggcaaaacctatgcttcctactactgcatggag
aaagtgctgagggagagtgatgatggggtggtcgtgtacattgcacctgcaaagtccctt
gttggtcaagtggctgcaactgttgagaatcgttttactaaaacgttgcctgctggcaga
actctatgtggtgcttttacaagagactatggtcacaatgtactaaactgtcaggtactt
attacagtgccggaatgttttgaaatcctgctgcttgctcctcatcgccaaaaatgggtg
gaaaggatcagatatgttatatttgatgaggtccattatcttggcagagaagttggagca
aaattttgggagctcctccttgtcattattcgatgtccttttttggttctttcagctacc
ataaataacccaaatcttctcaccaagtggctgcaatcagtaaaacagtactggaaacag
gcagacaagattatcgaagagaaatttatttctgaaaaacaggctgacaaatgtctcaac
tttctccaagacaattcatataaaaatcaatcatatgaagttagacttgtgctctgtgga
gagagatacaatgatttagagaagcatatatgttcagtaaaacatgatgatgtttatttt
gatcattttcatccctttgctgcactaacaacagatattattgaaaagtatggattccca
cctgatcttaccctcacctctcaagaaagcatccagctttatgataccatggctcaagtc
tgggaaacttggcccagggctcaggcattgtgtccagaggaattcattctttttaagaat
aaaatagtgattaagaagttggatgctagaaaatatgaagaaaacttaaaggcagaattg
acaaattggattaaaaatggccaagtgaagaaggtcaaaagagtactgaagaaccttagt
ccagattcattgtctagttcaaaagatatggtaaaaatgtttcctcttcttgttgaaaag
ttaagacaaatggataagttgcctgcaatattttttttgtttaagaatgatgatgtggga
aaaagagctggaagtgtgtgcacttttctggagaagacagagacaaaaagccatccccac
actgaatgtcatagttatgtctttggaatagacgaagtacttgaaaaagtggggaagaca
caaaaaaggatcattaaaaaaaacccaaagaaggctgaaaaactggaaagaaaacaaatg
tatatagctgaatatatcaatttcctggagaatctgaagattctggaaatctctgaggac
tgcacgtatgctgatgtcaaagccctacacactgagattaccaggaataaaggctcaact
ttggatagggtattaaaacgagtgcgattaacaagacacggtgaagaactgaaggcttta
gcacaaagggggattggatatcatcacagtggcatgtattttaaagaaaaagagttcgtt
gagatactctttgtaaaagggcttattagggtagtgacagctactgaaacacttgcctta
gggatccacatgccatgcaaatctgttgtttttgcccaagactcagtctatctggatgct
ttaaattacagacagatgtctggtcgtgctggaagaagaggtcaagacctgcttggaaat
gtgtatttctttgatatcccattgcccaaaataaaaagactcattgcatccagtgttcct
gagctgagaggacagttccctctcagcataaccctggtcctgcgactcatgctgctggct
tccaggagagaagacccagaggatgccaaggcaaaggtgttgtcagtgctaaagcattca
ttgctgtcttttaagagacaaagagccatggagactttgaaactttactttttgttttcc
ttgcagctcctgatcaaagaggactatttaaataaaaaatgtaatccaaagaaatttgca
ggacttgcatcatatttgcacggtcatgaaccttcaaatcttgtttttgtaaattttctc
aagagaggccttttccataatctctgtaagccagcctggaaaggctcacgacaattttcc
caagatgtgatggaaaagctcgtgttagtattggcaaatttgtttggaagaaaatatatt
ccagcaaaattccaaaatgctaatttaagtttttctcagtcaaaggtgatccttgctgaa
ctcccggaggattttaaagctgctttacatgagtataacctggcagtaatgaaggatttt
gcctccttcctactgattgcttccaagtcggtgaacatgacaaaagagtatcaactccct
ttgtcaagaatcaaattcacaggtaaagaatgtgaagactcccaactcgtgtctcacttg
atgagctgcaaggaaggaagagtagccatttcaccatttgtttgtctttcggggaacaca
gataacgatttacttcgaccagagactatcaaccaggtcatcctgcgcacaattggtgtt
agtggcactcaggctcctctgctgtggccatggaaattagataaccgaggaaggagaatg
ccactaaatgcatatgtgctcaatttctataaacacaactgcttgacaagattagaccaa
aaaaatgggatgcgtatgggacagcttttaaagtgtttgaaagattttgcattcaacatt
caggctatcagtgactccttgagtgaactatgtgaaaatgagcatgacaatgtagtcctg
gcatttaaacaattgagtcaaaccttttatgagaaacttcaagaaatgcaaactcaaatg
agtcaaaatcatttaaaataa
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integrated database retrieval system
