Nomascus leucogenys (northern white-cheeked gibbon): 105737533
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Entry
105737533 CDS
T03265
Symbol
SMARCB1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle03082
ATP-dependent chromatin remodeling
nle03250
Viral life cycle - HIV-1
nle04714
Thermogenesis
nle05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105737533 (SMARCB1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
105737533 (SMARCB1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
105737533 (SMARCB1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
105737533 (SMARCB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nle01009
]
105737533 (SMARCB1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nle03021
]
105737533 (SMARCB1)
03036 Chromosome and associated proteins [BR:
nle03036
]
105737533 (SMARCB1)
Protein phosphatases and associated proteins [BR:
nle01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105737533 (SMARCB1)
Transcription machinery [BR:
nle03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105737533 (SMARCB1)
SWI/SNF complex
105737533 (SMARCB1)
Chromosome and associated proteins [BR:
nle03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105737533 (SMARCB1)
PBAF complex
105737533 (SMARCB1)
SWI/SNF complex
105737533 (SMARCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
105737533
NCBI-ProteinID:
XP_030671825
LinkDB
All DBs
Position
7b:50760231..50806269
Genome browser
AA seq
385 aa
AA seq
DB search
MMMMALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEER
KKIVASSHGKKTKPNTKDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYL
REQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENA
SQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASA
IRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSE
LGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAE
MEKKIRDQDRNTRRMRRLANTAPAW
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcgctgagcaagaccttcgggcagaagcccgtgaagttccagctggag
gacgacggcgagttctacatgatcggctccgaggtgggaaactacctccgtatgttccga
ggttctctgtacaagagatacccctcactctggaggcgactagccactgtggaggagagg
aagaaaatagttgcatcgtcacatggtaaaaaaacaaaacctaacactaaggatcacgga
tacacgactctagccaccagtgtgaccctgttaaaagcctcggaagtggaagagattctg
gatggcaatgatgagaagtacaaggctgtgtccatcagcacagagccccccacctacctc
agagaacagaaggccaagaggaacagccagtgggtacccaccctgcccaacagctcccac
cacctggatgccgtgccgtgctccacaaccatcaacaggaaccgcatgggccgggacaag
aagagaaccttccccctttgctttgatgaccatgacccagctgtgatccatgagaatgca
tctcagcccgaggtactggtccccatccggctggatatggagatcgatgggcagaagctg
cgagacgccttcacctggaacatgaatgagaagttgatgacgcctgagatgttttcagaa
atcctctgtgacgatctagatttgaacccgctgacgtttgtgccagccatcgcctccgcc
atcagacagcagatcgagtcctaccccacggacagcatcctggaggaccagtcagaccag
cgcgtcatcatcaagctgaacatccatgtgggaaacatttccctggtggaccagtttgag
tgggacatgtcggagaaggagaactcgccggagaagtttgccctgaagctgtgctcggag
ctggggttgggcggggagtttgtcaccaccatcgcatacagcatccggggacagctgagc
tggcatcagaagacctacgccttcagcgagaaccctctgcccacagtggagattgccatc
cggaacacaggcgatgcggaccagtggtgcccgctgctggagactctgacagacgccgag
atggagaagaagatccgtgaccaggacaggaacacgaggcggatgaggcgtctcgccaac
acggccccggcctggtaa
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