Candidatus Nitronauta litoralis: G3M70_02085
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Entry
G3M70_02085 CDS
T07016
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
nli
Candidatus Nitronauta litoralis
Brite
KEGG Orthology (KO) [BR:
nli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nli03016
]
G3M70_02085
Enzymes [BR:
nli01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
G3M70_02085
Transfer RNA biogenesis [BR:
nli03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
G3M70_02085
Prokaryotic type
tRNA splicing ligases
G3M70_02085
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
QPJ60740
UniProt:
A0A7T0FYP4
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All DBs
Position
468466..469701
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AA seq
411 aa
AA seq
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MTADNFNVIHSNKGVPIKAWTKGVPLEEAAEQQLKNVAKMPFVFRHVAVMPDVHWGLGAT
IGSVIPTSGAIIPAAVGVDIGCGMMAVQTSLKADSLPDNLKEMRINIEKTVPHGRTNNGG
PGDRGAWSNIPDAQAEVWQNLETDYKEIVSRHPKIGKRGPNHVNHLGTLGGGNHFIEVCL
DEEDQVWFMLHSGSRGIGNRIGTYFIDLAKQDMRRWFINLPDTNLAYFAEGSDHFDDYVF
AVGWAQNFARINRELMMQAVIAAVKKTAGVPAFEAKVKAVNCHHNYVERESHFGKNVLVT
RKGAVRARKGDLGIIPGSMGASSFIVRGLGNDESFHSCSHGAGRIMSRAAAKKKFTVQDH
IDATEGVECRKDADVIDETPAAYKSIDDVMEAQKDLVEIVHKLHQVVCVKG
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgataactttaatgtaattcattctaacaaaggggttcccattaaggcatgg
accaaaggggtcccactggaagaggcggcagagcaacagttgaagaatgtcgcaaaaatg
ccattcgtttttcgtcatgttgcggtgatgccagatgtccattggggcctgggagcgacc
atcggcagcgtaattccaacttccggtgcaatcattccagcagctgtgggagtggatatc
gggtgcggcatgatggcggtgcagaccagtttgaaagcggactcactgccagacaacctg
aaagaaatgcgtatcaacatcgaaaaaaccgtgcctcatggtcgaaccaataacggcgga
ccgggggaccggggtgcatggtcgaacattcccgatgcccaggccgaggtttggcaaaac
ctggaaacggattataaggagatcgtcagccgacatccgaagattggaaagcgcggacca
aatcacgtcaaccatctgggaacactcggcggtggaaaccatttcattgaagtgtgcctg
gacgaagaagatcaggtctggttcatgttgcacagcggatcccgcggaattggcaaccgg
atcgggacatacttcatcgacctggcaaagcaggatatgcgtcgatggtttatcaacctg
ccggatacaaacctggcgtactttgctgagggcagcgatcatttcgacgattatgttttt
gcagttggctgggcgcagaactttgcgcgaatcaaccgggaactcatgatgcaggcggtg
attgcggcggtgaagaaaactgccggagttccagcttttgaggccaaagtcaaagccgtg
aattgtcatcacaactatgtcgaacgggaaagccatttcggcaaaaacgtactcgtcacc
cgtaaaggtgcagtacgcgcaaggaagggtgacctcggcattattccgggaagcatgggt
gcaagttcctttatcgttcgaggactgggcaatgatgaaagttttcatagctgcagtcac
ggtgctggcaggattatgtcccgcgcggcagcaaaaaagaagttcactgtccaggaccac
attgatgccactgaaggcgttgaatgccgaaaggatgccgatgtgatcgatgaaacacct
gcagcttacaaaagcattgacgatgtgatggaagcgcagaaggacctggtggaaattgtc
cataaactgcaccaggtggtttgtgtaaaagggtag
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