Candidatus Nitronauta litoralis: G3M70_11020
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Entry
G3M70_11020 CDS
T07016
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
nli
Candidatus Nitronauta litoralis
Pathway
nli00541
Biosynthesis of various nucleotide sugars
nli01100
Metabolic pathways
nli01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
nli00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
G3M70_11020 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
nli01005
]
G3M70_11020 (rfaD)
Enzymes [BR:
nli01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
G3M70_11020 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
nli01005
]
Core region
G3M70_11020 (rfaD)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
Ldh_1_N
KR
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
QPJ62370
UniProt:
A0A7T0G0J6
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Position
2419795..2420772
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AA seq
325 aa
AA seq
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MIVVTGGAGFIGSAIAAALNSRGYSDLWIVDVDDHLEKKRNLSALTYERYLSRETFLDEV
LKGSLPSTEAIFHLGACSSTTEMDVDFLNRNNVNYTRALAEYCLSNNVRFIYASSAATYG
NGDQGYLDDEGRLQEFKPLNPYGQSKHDFDLLARQQGWLDRIVGLKYFNVYGPNEYHKED
MRSMVLKGFQQIRETGRLRLFKSDRPEYTDGGQVRDFLYVKDAVAMTLFFLDQKEKGGVF
NIGSGRARSWNDLAKALFDAMELESDIEYFDMPDHIKNQYQYHTEAAMEKLHTAGFQEPC
MTLEQGVEDYVRNFLMKNYRRLGEE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgatcgttgttaccggaggagcggggttcattggaagtgcaattgcggccgctttaaat
agtcgcggttattcggatttatggatcgtcgacgtagatgatcaccttgaaaaaaagcgt
aatctttcggcactcacctacgaacgctatctcagtcgtgaaacatttctggatgaagtt
ttaaaaggaagtttgccgagcacagaggcaatctttcatttgggagcctgttcttctaca
accgagatggacgtcgattttttaaaccgtaacaacgtcaattacacccgggctttggcg
gagtattgcctgagtaacaacgtacgatttatttacgcttccagcgccgcgacctatggg
aatggggatcagggatatctggatgatgaagggcgattacaagaattcaaaccgctcaat
ccctatggtcagagtaaacatgattttgatcttctcgccaggcagcagggatggctggat
agaatagttgggttgaaatattttaacgtgtacggaccgaacgaatatcataaggaagac
atgcgcagtatggttttaaagggatttcagcagatccgggaaaccgggcggttgagattg
tttaaatcggacaggccggaatacaccgatggagggcaggtacgggatttcctttacgtg
aaagacgccgtggccatgactctgttttttctcgatcaaaaagagaaaggtggggttttc
aacattgggtccggacgagcgcgttcctggaacgatcttgccaaggccttgtttgatgcc
atggaacttgaaagtgatatcgaatattttgacatgccagaccatatcaaaaaccagtat
cagtaccatacagaagcggcaatggaaaaactccacacagctggcttccaggaaccttgc
atgaccttagagcaaggcgttgaagattacgtccgcaattttctcatgaaaaattatcgg
cggctgggggaagaataa
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