Candidatus Nitronauta litoralis: G3M70_13725
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Entry
G3M70_13725 CDS
T07016
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nli
Candidatus Nitronauta litoralis
Pathway
nli03030
DNA replication
nli03430
Mismatch repair
nli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G3M70_13725 (dnaE)
03430 Mismatch repair
G3M70_13725 (dnaE)
03440 Homologous recombination
G3M70_13725 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nli03032
]
G3M70_13725 (dnaE)
03400 DNA repair and recombination proteins [BR:
nli03400
]
G3M70_13725 (dnaE)
Enzymes [BR:
nli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G3M70_13725 (dnaE)
DNA replication proteins [BR:
nli03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G3M70_13725 (dnaE)
DNA repair and recombination proteins [BR:
nli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G3M70_13725 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HHH_3
DUF6282
Motif
Other DBs
NCBI-ProteinID:
QPJ62877
UniProt:
A0A7T0BXX1
LinkDB
All DBs
Position
3011861..3015334
Genome browser
AA seq
1157 aa
AA seq
DB search
MKHSDFVHLHVHTHFSLLDSSLRHEDLFKRAAEFKMPAVAMTDHSNLFGALEFFQGAKKH
GLKPIIGCEVYVAPESRLKKEKDANHQLRDASYHLLLLAKNDRGYKNLLELVTRAYLEGF
YYKPRIDKELLASNADGLIALSCCNRGEIAHNLGKENLPRATKVAQQYMEIMGPDNFYLE
LQDHGQDWQKKINRELITLGKNLNLPLVATNNCHYLEKSDFRAHEILLCLQTGKTMDDQY
RMRYPSDEYYFKSPEEMKEVFKDVPEAIENTIKIAERCNVEIETGIDNLPEYPVPEGYTL
HTYLIEISRKGLEERFSEFKALGLEFDKKPYEERLEEELHIIEKMGYPGYFLIVWDFIHY
AKVNDIPVGPGRGSAAGSLVAYCLRITDLDPMQYDLLFERFLNPERVSMPDIDIDFCIHG
REKVIEYVSKKYGGNQFVTQIITFGSMNAKGVLRDVGRVLGMPYGDVDKIAKLVPNKLNI
TLAEAFKEESKFKSMRKENKQVDELLDIAVSLEGLPRHCSTHAAGVVISPKPLTEFCALY
KGGNDEITTQFSMNNIEKLGLLKMDFLGLRTLTVIDNALKLLKSSTGLDLDINAIRKDDA
ETFKLLGEGRTLGVFQLESSGMRDLLVKMKPDCFEDIIALLALYRPGPLESGMIDDYVKR
KHGTMEEKYDLPQLEAILKETHGVILYQEQVMKIANVLAGFTLGDADLLRRAMGKKKPEE
MARQREKFMEGSHSNKVPEKKAKKIFDLMEKFAGYGFNKSHSAAYALISYQTAYLKAHHP
LPFFGALITSEMDNTDKVIRYFNDCRESDINILPPDVNEGQCDFSISGDKLLFGLGAIKN
VGAKAIDSIIETREELGRFNSIKQFCENVDLGQVNRRVIESLIKSGACDSFEESRAVMVK
NLQVYMDLGQARQRDREMGQSSLFDGIQESESDLMSASIKKVEDWSERDRLKYEKETLGF
YVSGHPLNRFQRDMAWFSNATTASIAESSNGAKVTLAGIPARVITKVTRKGDKMGLVTLE
DLQGTVELTVWPDIYERCATLLEDDQPILVKGKVESGDVQGTKVIVDEIFLLEDYKNHFQ
GKVSIDIRTLGLESSTLKSLHEVLAHHRGQNQVKVRFIFPDQDQHTRTLLMDLTVNPTDD
LIAQVEEVVGKGAIRFE
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacattcggatttcgtccatctccacgtacatacccacttcagcctgcttgactcc
tccttgcggcatgaagacctgttcaagcgtgccgcagaattcaaaatgcctgcggtggcg
atgacggaccactccaaccttttcggggctcttgagttttttcagggagccaaaaaacat
ggcctcaaaccgatcattggctgtgaagtttacgtggcgccggagagccgattgaaaaag
gagaaggatgcaaaccatcaactgcgagacgcttcctaccatctcctcctgctcgcaaaa
aatgacaggggatacaaaaacctgttggaattagttactcgtgcttaccttgagggtttt
tactataaacctagaatagataaggagcttttggcttcgaatgcggacggtctcattgcc
ctgagttgctgcaatcgaggtgagatagctcacaaccttggcaaggaaaacctgccacgg
gctaccaaggtggctcagcaatatatggaaatcatgggcccggataacttttaccttgag
ttgcaggaccatggacaggactggcagaagaaaataaaccgcgagttaatcaccctcgga
aaaaatctcaatttacccctggttgcgaccaacaattgccattatctcgaaaagtcagat
tttcgagcgcatgaaatcctgctttgtctgcagacgggtaaaaccatggatgaccaatac
cgcatgcggtatccgtcggacgagtattactttaaatcccctgaagaaatgaaggaggtg
tttaaggatgttccggaggcaattgaaaacaccatcaaaattgccgaacgctgcaatgtg
gaaatcgaaactggaatcgacaacctgcccgagtacccggttccggaagggtacaccctc
catacttatttgattgagatttctcggaagggacttgaagagcgattctctgaatttaag
gctctggggctggagtttgataaaaagccttatgaagagcgactcgaagaagagttacat
attattgagaagatggggtaccccggctatttcctgatagtctgggattttatccattat
gccaaggtgaatgacatcccggtggggccagggcgcgggtctgctgcgggcagtcttgtg
gcttattgtctccgtattacggatctggatcccatgcaatatgacctgttgtttgagcgc
ttcctgaaccctgagcgtgtcagcatgcctgatatcgatatcgacttttgtatccatggg
cgtgaaaaggttatcgagtacgtttcgaaaaaatacggtgggaatcagtttgttacccag
atcatcaccttcggcagtatgaatgccaaaggggttctccgggatgtcggccgggtattg
ggaatgccttatggagatgtcgataaaatcgccaaacttgtgcccaataagctgaatatc
accctggcggaggctttcaaggaagaatccaaatttaaatccatgcgcaaggagaacaag
caggtcgatgagttgttggacatcgctgtgagccttgaaggattgcctcggcattgttcc
acgcatgctgcaggggtcgtgatttctcccaagcctctgactgaattctgtgccctgtac
aagggaggcaacgacgaaatcacaacccagttttcgatgaacaatatcgaaaagctggga
ttgttgaagatggatttcctgggtttgcgaactttgacggtgatcgacaatgccctcaag
ctccttaaaagctccactgggctggacctcgatatcaatgccattaggaaagatgacgct
gagacgttcaagttgcttggggaagggcggacactaggggtgtttcaacttgaaagctcc
ggtatgcgtgaccttctggtaaaaatgaaaccggattgttttgaagacatcatcgccttg
ctagcattgtatcgccctgggccgcttgagagcgggatgattgatgactacgtcaaacgc
aaacacggcaccatggaggagaaatacgatctgccccaattagaagctattttgaaagag
acgcatggggttattttgtatcaggagcaggtgatgaagatcgcaaacgtgctcgctggg
tttactctgggtgatgcggatcttttgcgccgggcaatgggaaaaaagaaaccggaagaa
atggcccgccagcgtgaaaaattcatggaaggaagccactccaacaaagtacctgagaaa
aaagcgaaaaagatattcgacctgatggaaaagttcgcgggctacggcttcaataaatca
cacagtgctgcctatgcgttgatttcttaccagacagcttatctaaaagcccatcatccc
ttgccgttttttggagcactgatcaccagtgaaatggacaatacggataaagtgattcgc
tattttaatgattgccgtgaatcggatatcaatatcctgccgcccgatgtaaatgaaggg
caatgtgacttctccatctctggagataaattgttgtttggccttggtgcgatcaaaaat
gtgggagccaaggcaattgattctatcattgaaacccgggaggaattgggacgtttcaat
tccattaaacagttttgcgaaaatgtggaccttgggcaggtgaatagaagagtgattgaa
agcctgataaaaagtggagcctgtgattctttcgaagaaagccgtgccgtgatggttaaa
aacctccaggtgtatatggatcttgggcaggctcggcaacgggatcgggagatggggcaa
agcagtttgtttgatggaattcaggaatctgaatcggacttgatgtccgcgagcattaaa
aaagttgaagactggtccgagcgtgatcggttgaaatatgaaaaggaaactttggggttt
tatgtttcaggacaccccttgaatcgtttccaacgcgatatggcctggttttcgaatgcc
accacagcatcaattgccgaaagcagcaatggagcaaaagttacgttggccggaattccc
gccagagtgatcaccaaggtgacgcgcaagggagataaaatggggctggtcacccttgag
gatttacaggggactgtggagctcaccgtttggccggatatatatgaacgctgtgcgacc
ttgctggaagacgatcagccaattctggtcaaaggaaaagtggaatccggggatgttcag
ggtacgaaagtgatcgtcgacgaaatatttttactggaggactataagaatcacttccag
ggaaaagtaagcatcgatatccggaccctcggcctggaatccagtacgttaaaatccctg
catgaagttctggctcatcatcgagggcaaaaccaggtgaaagtacgatttatttttcca
gaccaggaccagcacacacgcaccctgctgatggacctcacggttaacccgacggatgat
ctgattgcccaggtggaagaggtcgtgggaaaaggagcaattcgttttgaatga
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