Nostoc linckia: NIES25_00930
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Entry
NIES25_00930 CDS
T10227
Name
(GenBank) ABC transporter-related protein
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
nlk Nostoc linckia
Pathway
nlk02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nlk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NIES25_00930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nlk02000
]
NIES25_00930
Transporters [BR:
nlk02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NIES25_00930
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Secretin
AAA_29
AAA_16
AAA_22
AAA_23
AAA_18
MMR_HSR1
APS_kinase
RsgA_GTPase
Mg_chelatase
NACHT
AAA_21
AAA_28
AAA_24
Dynamin_N
Phage_Gene47
Motif
Other DBs
NCBI-ProteinID:
BAY73685
LinkDB
All DBs
Position
complement(111494..113245)
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AA seq
583 aa
AA seq
DB search
MAKSRRLAKLGAYLRPHWREASLGILALLSVNALGVYIPWLIRDGVDKLSTTFNWNQILH
YVVIIVLLSSAMWLMRMASRIWLFGVGRQVEFDLKQRIFEHLLKLEPSYFATNTAGDLIS
RATSDVDNIRRLVGFAVLSLANTVFAYALTLPAMLTISVDLTLASLAVYPFMFLFVSLFS
DRLRKQQAAVQEQLSDISELIQEDISGIALIKIYAQEANERRAFAKKNQQLLTANLELAK
SRNTLFTFIGGLANISSLVIIWLGATRMSSGTLEVGDFLALLIYVERLVFPTTLLGFTIS
TYQRGEVSIDRLESILSVTPKIQDTADAVHLTIDELKGEVTAKNLSYTYPGSAAPALENI
NFTIAPGETVAIVGAIGSGKSTLANALPRLLDIEPEQLFLDGHDITKIALGDLRNAIGYV
PQDSFLFSTTIKNNIRYGDPVSEQERVELVAKLAQIDGEINNFPQQYETIVGERGITLSG
GQRQRTALARAMLVDAPVLILDDALSSVDNQTATQILKNLSGGTQKKTVIFITHQLSAAA
AADRIFVMEKGKIVQVGNHLELVQQQGLYRSLWSQHQVEELLH
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatctcgaagactcgctaaacttggtgcttaccttcgaccccattggcgggaa
gcgtctttaggcattctcgctctgttgtctgttaatgcccttggcgtttatatcccttgg
ctgattcgtgatggggttgacaaattatcaacaaccttcaactggaatcaaatactacat
tacgtagttattattgtattgctcagttccgcaatgtggctgatgcgtatggcttcgcgc
atttggctatttggggtagggcgtcaagtggaatttgacctcaaacaacggatttttgaa
cacttactgaagctcgaaccgtcttattttgccactaatactgctggtgatttgattagt
cgggctactagtgatgtggacaatatcaggcggttggtgggttttgccgtcttgagtttg
gcaaatacagtttttgcctacgctttaacactgccagcgatgcttaccattagtgtggat
ctcacactagcctctttggcagtgtacccttttatgttcttgttcgtgagtttgtttagc
gatcgcttacgcaaacaacaagcagcagtccaagagcaactctctgatatcagcgaactc
atccaagaagatatcagtggtattgctctaattaaaatctatgcccaagaagctaacgag
cgtcgagcttttgccaagaaaaatcagcaactattgactgctaatttggaactggcaaaa
agccgcaatacgctttttacttttattggcggtctagctaatatcagttcgctggtaatt
atttggctaggtgcgactcgaatgtcttctgggacgcttgaagttggggactttttagcg
ctcttaatttatgtagagcgtttagtgttccccactactcttttggggtttacaattagc
acctaccaacggggtgaagttagtatagatcggctggaatctattctcagcgtcacacca
aaaattcaagacacagccgatgcggtacatctaacaattgatgaactcaaaggagaagtg
acggcaaaaaatctcagctacacttatcctggttctgctgctcccgctttagaaaatatc
aactttaccattgctccgggggaaaccgtggcaattgttggggcaattggttcgggaaaa
tctactttggcaaatgctttgccgcgtttgctcgatattgaaccagaacaattgttctta
gatgggcacgatattactaagatagccttgggagatttgcgaaatgcgatcggctacgtt
ccccaagatagttttctttttagcaccacaattaaaaataatatccgctacggtgaccca
gttagcgaacaagaaagagtagagttggtagccaaattggctcaaattgatggagaaatt
aataattttccccagcaatacgaaaccattgttggcgaacgcgggattactctttctggc
ggtcagcgccaacgtacagccttagctagagctatgctggtcgatgcgccagtgttaatt
ttagatgatgccctctccagtgtagataatcaaacagctacacaaattctcaaaaatctc
tccggtggtactcagaaaaaaacggtgattttcattacccatcaattatctgctgctgct
gctgctgaccgaatttttgttatggaaaagggaaaaattgtgcaggtgggaaatcactta
gaactggtacaacaacagggactttacagaagtttgtggagccagcatcaagttgaggaa
ttattgcattaa
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