Nostoc linckia: NIES25_08460
Help
Entry
NIES25_08460 CDS
T10227
Name
(GenBank) phytoene dehydrogenase-related protein
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
nlk Nostoc linckia
Pathway
nlk00906
Carotenoid biosynthesis
nlk01100
Metabolic pathways
nlk01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
nlk00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
NIES25_08460
Enzymes [BR:
nlk01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
NIES25_08460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
HI0933_like
FAD_oxidored
Pyr_redox_2
Pyr_redox
Thi4
GIDA
FAD_binding_3
GMC_oxred_N
Motif
Other DBs
NCBI-ProteinID:
BAY74433
LinkDB
All DBs
Position
complement(965540..967030)
Genome browser
AA seq
496 aa
AA seq
DB search
MTIDAIVIGSGIGGLVTATQLAAKGAKVLVLERYSIPGGSAGYFERQGYRFDVGASMIFG
LGENGTTNLLTRALSAVNVSQEAIADPVQIHYHLPQGLDLKVDRVYEKFLQNLTAHFRQE
ERGIRRFYDECQKVFNCLNNIDLLSLEEPRYLLRVFFQHPLACLGLVKYLPQNAGDIARR
YIKDPQLLKFIDMECYCWSVVPADMTPMINAGMVFSDRHYGGVNYPKGGVGQIAQKLVEG
LEKAGGEIQYQARVTKILTEQGRAVGVQLANGKVYRGKRIVSNATRWDTFQQLLPAEEMP
HNEKKWQQNYQKSPSFLSLHIGVKQSVLPEGTECHHILLEDWEKMMAVEGTIFVSIPTLL
DPDLAPSGYHIIHAFTPHWIDNWQGLSQTEYEARKEKAAWRIIDRLEQIFPGLDAGLDYL
EVGTPRTHRRFLGREDGTYGPIPRRKLRGLLKMPFNRTAIPGLYCVGDSTFPGQGLNAVA
FSGFACAHRIAVDLGL
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgacaattgatgcgatcgttattgggtctggaattggcggtttagtaacagcgactcaa
ctagcagcaaaaggagcgaaagtcctggtactggaacgttattcgatcccaggtggtagt
gctggttattttgaacggcaaggttatcgatttgacgttggggcatcaatgatttttggc
ctgggggaaaacggtactaccaatttactcacccgcgcactgtccgcagtaaatgtcagc
caagaagcgatcgcagatccagtgcaaattcactatcatctaccccaaggtttagacctg
aaggttgaccgggtttatgaaaaatttttgcaaaatcttactgctcattttcgccaggaa
gaacgggggattcgtcgcttttatgacgaatgccaaaaagtattcaactgcctcaataac
attgatttgctgtcgctggaagaacctcggtatttactgcgggtatttttccagcatcct
ttggcgtgtctcggtttagttaagtatctgccccaaaatgcaggggacatagccagacgc
tacatcaaagatcctcaattgttgaaatttatcgatatggagtgttattgctggtcggtg
gttccagcagatatgacaccaatgattaatgctgggatggtcttttctgacaggcattac
ggcggagtcaactatcccaaaggcggagtcggacaaattgcccaaaaactggttgagggt
ctagaaaaagctgggggtgagattcagtaccaagccagagtcacaaaaattctcacagaa
cagggacgagcggtaggcgtgcagctggctaacggcaaagtatatcggggtaaacgcata
gtctctaatgctacacgctgggatacatttcaacaattactaccagcagaggaaatgcct
cataatgagaaaaagtggcaacaaaattatcaaaaatcacccagcttcttgagtttacat
ataggggtaaaacagtcagttttacctgaaggaaccgagtgtcaccatattttgctggaa
gattgggaaaagatgatggcggtggaaggcacaatttttgtttcgattcccacactcctt
gacccagatttagcaccaagtggatatcatatcattcatgcgtttacgcctcactggatt
gataattggcaaggactttctcagactgaatacgaagcgaggaaagaaaaggcggcttgg
cgaattatcgatcgcttagagcagatttttcccggcttagatgcgggattagattatttg
gaggtaggaacaccccgcacccatcgccgctttttgggtcgtgaggatggcacctatggg
ccaattccccgacgcaagttgcgcgggttgttgaaaatgccctttaatcgcaccgctatt
ccgggactttattgtgttggggatagcacctttcccggccaaggattgaacgcagtagct
ttttctgggtttgcctgcgctcaccgcattgccgtagatttgggactttga
DBGET
integrated database retrieval system
