Nostoc linckia: NIES25_09530
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Entry
NIES25_09530 CDS
T10227
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nlk Nostoc linckia
Pathway
nlk03420
Nucleotide excision repair
nlk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nlk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NIES25_09530
03430 Mismatch repair
NIES25_09530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nlk03400
]
NIES25_09530
Enzymes [BR:
nlk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NIES25_09530
DNA repair and recombination proteins [BR:
nlk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NIES25_09530
MMR (mismatch excision repair)
Other MMR factors
NIES25_09530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
DEAD
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_11
AAA_12
ResIII
GpA_ATPase
AAA_22
GA
Motif
Other DBs
NCBI-ProteinID:
BAY74539
LinkDB
All DBs
Position
complement(1095577..1097901)
Genome browser
AA seq
774 aa
AA seq
DB search
MTTTIDFLSHLNPSQRQAVEHYCGPLLVVAGAGSGKTRALTYRIANLILKHRVDPENILA
VTFTNKAAREMKDRIQRLFAQEEAMKQHGQRLDLLTEYQQMQLRSQVYKKTIKDLWCGTF
HSLFSRILRFDIEKYQDEKGRQWNRNFSIFDESDVMTLIKEIVTKQLNLDDKKFDARSVR
YAISNAKNQGFSPQEFENEQPNYRGRVIADVYNRYQDKLAENNALDFDDLILVPTRLFQQ
NEQVLDYWHRKFRHILVDEYQDTNRTQYQLINLLVTNGETKKSEWEWQNRSVFVVGDADQ
SIYSFRMADFTILLEFQNDFGDGLADDDTRTMVKLEENYRSCENILQAANELIENNTQRI
DKILKPTRGAGEQIYCHKADNELEEADFVIGQIRNLEQKNPELNWGSFAILYRTNAQSRP
FEELLVKYQIPYTVVGGMKFYDRKEIKDVIAYLRAIANPSDTVSLLRVINTPRRGIGKTT
IDALVNASQQLGTTLWEILSDETSVNTLAGRATKAVNSFAEMISRWQGQIGTLPVTEVLQ
GILEDSGYVQDLMSQGTDEATDRVQNVQELYNAALQFQEENEDISLTAFLQSTALSSDLD
NLKEGQTAVSLMTLHASKGLEFPVVFLVGLEQGLFPGYRSLSDPASLEEERRLCYVGITR
AQERLYLSHARERRLYGSREPAMPSQFLSELPEELLATQRMSRQTYTKSASNFSGKQDTT
HNWQVGDRVLHKTFGLGEITHVFGAGNKLSVAIKFASLGQKIVDPRVAQLQRVE
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaaccattgactttctcagtcaccttaaccccagccaacgccaagctgtcgag
cattactgcggcccgttgctagttgttgctggcgcgggttccggtaaaacacgagcgcta
acttatcgcattgctaatctgattctcaaacaccgtgtcgatccggaaaatattctggcg
gttacttttaccaacaaagccgcgcgggaaatgaaagaccggattcaacggctgtttgcc
caagaagaagcaatgaaacaacacggtcagcggttggatttgttgacagaataccaacaa
atgcaattgcgatcgcaagtttacaaaaagaccattaaagatttgtggtgcggtactttc
cacagtctattttctagaattctacgctttgatattgaaaaatatcaagacgaaaaagga
cgccaatggaatcgcaatttttctatctttgatgaatcagatgttatgactctcatcaaa
gaaattgttaccaaacagttaaatctagacgataaaaaatttgacgctcggtctgtccgc
tacgctattagtaacgccaaaaaccaaggcttttcaccccaagaatttgaaaacgaacaa
ccaaattatcgcgggcgggtaattgctgatgtctataatcgctatcaagataagttagca
gaaaacaatgctctcgattttgacgatctaattctcgtacctactagattatttcaacaa
aacgaacaagtattagattattggcatcgcaagtttcgccatatcctcgtagatgaatac
caagatactaaccggactcaatatcaattaattaacttattggtaactaatggcgaaacc
aaaaagagcgaatgggaatggcaaaatcgctcagtttttgttgtcggcgatgcagaccaa
tcaatttacagttttcggatggcagatttcacaatcttgctagaatttcagaatgatttt
ggcgatggcttggcagatgatgatacccgcacgatggtcaagctagaagaaaactatcgc
tcttgtgaaaatattctgcaagcggctaacgaactaattgaaaataacacccaacgaatt
gataaaattctcaaaccaacgcggggggctggcgagcagatttattgtcacaaagcggat
aatgaactagaagaagctgactttgtaattggtcaaattcgcaatttagaacagaaaaat
ccggaattaaattggggtagttttgccatactttatcgtacaaatgcccaatctcgtccc
tttgaagaattgctagttaaatatcaaattccttacacggttgtgggaggaatgaaattt
tacgatcgcaaagaaattaaagatgtaattgcttacttaagagcgatcgccaacccatct
gatacagtaagtttattacgagttatcaatactccccggcgcggaattggcaaaactacc
attgatgctttggtgaatgcctctcaacaattaggcacaactttgtgggaaatactcagc
gatgaaacatcagttaatacattagctggaagggcaacaaaagctgtaaatagctttgcc
gaaatgattagccgttggcaaggacaaatcggtacgcttccggtaactgaagttttgcaa
ggcatattagaagattctggttacgttcaagacttaatgagtcaaggcacagatgaagcc
acagatagagtacaaaacgtccaagaactttacaacgccgcattgcaatttcaagaagaa
aacgaagatatttcgctaacagcattcctccaaagtactgcactcagttccgatttagat
aacttaaaagaaggacaaacagctgtttcgttgatgactttacacgcctccaaagggcta
gaattccccgtagtctttttggtgggattagaacagggactatttcctggttatcgttcg
ctgagtgaccctgcgtctttggaagaagaacgtcggttgtgttacgtaggaattactcgc
gcccaagaaaggttgtatttatcacatgcacgcgaacgtcgtttgtatggttcccgcgaa
cctgctatgccttcgcaatttctcagtgaattgccagaagaattattagctacccaacgc
atgagtcgtcaaacttataccaaaagtgcctctaattttagcggtaagcaagatacaacg
cataattggcaagtaggcgatcgcgtattacataaaacttttggtctaggtgaaataacc
cacgttttcggagcagggaataagttatctgtagcgattaaatttgccagtttggggcaa
aaaatcgttgacccaagagtagcacagttacaaagagtggagtaa
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