Nostoc linckia: NIES25_13580
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Entry
NIES25_13580 CDS
T10227
Symbol
clpB
Name
(GenBank) endopeptidase Clp ATP-binding chain
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
nlk Nostoc linckia
Brite
KEGG Orthology (KO) [BR:
nlk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
nlk03110
]
NIES25_13580 (clpB)
Chaperones and folding catalysts [BR:
nlk03110
]
Heat shock proteins
HSP100
NIES25_13580 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
Clp_N
ClpB_D2-small
AAA_5
AAA_16
AAA_22
Sigma54_activat
AAA_18
Mg_chelatase
nSTAND3
IstB_IS21
TniB
AAA_14
ATPase_2
RuvB_N
AAA_28
AAA_7
NBD_SMAX1
Zeta_toxin
NACHT
TsaE
DNA_pol3_delta2
ResIII
AAA_23
Torsin
Parvo_NS1
Sigma54_activ_2
KTI12
Motif
Other DBs
NCBI-ProteinID:
BAY74941
LinkDB
All DBs
Position
complement(1584371..1587013)
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AA seq
880 aa
AA seq
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MQPTDPNKFTDKAWEGIVKSQDIVRAYQQQQLDVEHLIIALLEEPTSLAIRILARSEVDP
IRLQQQLEAFTQRQPKVGKSDQLYLGRGLDVLLDQAEEIRVNMKDSYISVEHILLAFADD
ERVGRRILKGFNVDVAKLEAAIKSVRGSQKVTDQNPESRYEALQKFGRDLTEQAKSGKLD
PVIGRDDEIRRVIQVLSRRSKNNPVLIGEPGVGKTAIAEALAQRMVNGDVPESLKNRQLI
SLDMGSLIAGAKYRGEFEDRLKSVLREVMESNGQIVLFIDELHTVVGTGSNQQGAMDAGN
LLKPMLARGELRCIGATTLDEFRKHIEKDAALERRFQQVFVDQPTVENTISILRGLKERY
EVHHNVKISDSALVAAATLSARYISDRFLPDKAIDLVDEAAAQLKMEITSKPAELETIDR
RLMQLEMEKLSLAGEEKGIPQTRERLQRIEEEIANLTEKQHIFNDQWQGEKQLLEAISAL
KKEEDALRVQIEQAERAYDLNKAAQLKYGKLEGVQRDREAKEAKLLEIQSLGSTLLREQV
TEADIAEIVAKWTGIPVNRLLESERQKLLQLESHLHQRVIGQEEAVAAVAAAIRRARAGM
KDPSRPIGSFLFMGPTGVGKTELARALAQFLFDSDDALIRLDMSEYMEKHSVSRLVGAPP
GYIGYEEGGQLSETVRRRPYSVVLLDEVEKAHPDVFNILLQVLDDGRITDSQGRTVDFRN
TVIVMTSNIGSEHILDVSGDDSKYETMRKRVMDNLRSHFRPEFLNRIDDLILFHTLSRLE
MRHIIRIQLKRVENLLRDQKIFFEISPGACDYLVEAGYDPVYGARPLKRAIQREVENPLA
TKLLENTFISGDTIFIDRSENGLSFSKKMPVKVSVTQIAT
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctacagatcctaataaatttacagataaagcctgggaagggattgttaaatct
caggatatagttcgtgcttatcaacaacagcaactagatgttgaacatttaataattgcc
cttctagaagaacccactagtctagcaatacgtattctggctcgatctgaagtcgatcca
attcgcttgcagcaacaattagaagcctttacccaacgtcagccaaaagttggtaaaagc
gatcagctttaccttggtcgcggtttagatgttttactagaccaagccgaggaaattaga
gtcaacatgaaagattcctacatttctgtggaacacatcctgctggcttttgctgacgat
gaacgcgttggacggcggatactcaaaggctttaatgtggatgtagcgaagttagaagct
gcaatcaaaagtgttcgcggtagccaaaaagtaacagaccaaaacccagaatcccgctac
gaagctttacaaaaatttggtcgagacttgacagaacaggcaaaatctggaaaactcgac
ccggtgattggacgggacgacgaaattcgtcgggtaattcaggtattgtcccgccgcagc
aaaaataatccggtattgattggcgaacctggagttggtaaaactgcgatcgctgaagct
ttagcacagcgtatggtcaacggtgatgttcccgaatccctgaaaaatcgccagttgatc
tctttggacatgggtagcttaattgctggggcaaaataccggggtgaatttgaagaccgc
ttaaaatccgttctccgggaagtgatggaatcaaacggtcaaatcgtcctatttattgac
gaattgcacaccgtagtcggtacaggttccaatcaacaaggggcgatggatgcgggaaat
ttactcaaacccatgctggcgcggggagaattgcgttgcattggcgctactaccttagat
gaattccgcaagcacattgagaaagacgccgccctagaacgccgctttcagcaagtattt
gtcgatcagccaaccgtagaaaatactatttccattcttcgggggttgaaagaacgctat
gaagtgcatcacaacgtcaaaatttctgattcagcgttggtagccgcagcaacattgtcg
gcgcgttatattagcgatcgctttttaccagataaagccattgacttggtagatgaagcc
gccgcacagttaaaaatggagattacctccaaaccagccgaactagaaaccattgaccgc
cgcctcatgcagctagaaatggaaaagctgtcattagctggtgaagaaaaaggtattccc
caaaccagagaacgtttgcagcgaattgaggaagaaatcgccaatttaactgagaagcag
catatattcaacgatcaatggcaaggtgaaaagcagttattagaagcgataagtgcttta
aaaaaagaagaagatgcgctgcgagtgcaaatcgaacaggccgaacgcgcctatgatttg
aataaagccgcccaattgaagtatggcaaattggaaggagtgcaacgcgatcgcgaagcc
aaagaagcgaaacttttagaaattcaaagccttggttccaccttgctgcgagaacaagtc
accgaagccgatattgctgaaatcgtcgccaagtggacgggaatccccgttaatcgcctg
ttggaatccgaacgccaaaaattactgcaactagaaagtcacttgcatcaacgagtcatt
ggccaagaagaagcagtagcagcagtagcagccgcaattcgccgcgcccgtgcgggaatg
aaagacccctcgcgtcccattggttcatttttattcatggggcctacaggcgtaggtaaa
accgaacttgcccgtgctttagctcagtttctctttgattctgacgatgcattgatccgc
ctcgatatgtccgagtatatggaaaaacactcagtttcgcggctggtgggagcgcctccg
ggatacatcggctacgaagaaggcggtcaactttctgagacagttcgccgccgtccctac
tcagtggtgctgctggatgaagtagaaaaagcacaccccgatgtgtttaatattttatta
caggtactagatgacggcagaattactgattcccaaggaagaacggtagattttcgcaac
accgttattgtcatgaccagtaacattggtagcgaacatatattggatgtctctggtgat
gattccaagtatgaaaccatgcggaagcgggtaatggacaacttgcgatcgcattttcgc
cccgaatttctcaaccgcattgacgatctaattctcttccataccctcagccgtttggaa
atgcggcatattatccgcattcagctcaaacgcgtagaaaatctcctccgcgatcaaaaa
atcttctttgaaatctccccaggtgcttgtgattacctcgtagaagcaggctatgaccca
gtttacggtgcccgcccactcaaacgcgcaattcagcgagaagtagaaaacccccttgct
accaagttattggaaaatacctttatctctggagacacgattttcattgacagaagtgaa
aacggtctgtcttttagtaaaaagatgccagtgaaagtttcagtaacacagattgctacg
tag
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