Nostoc linckia: NIES25_20990
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Entry
NIES25_20990 CDS
T10227
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nlk Nostoc linckia
Brite
KEGG Orthology (KO) [BR:
nlk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nlk03032
]
NIES25_20990
03400 DNA repair and recombination proteins [BR:
nlk03400
]
NIES25_20990
Enzymes [BR:
nlk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NIES25_20990
DNA replication proteins [BR:
nlk03032
]
Prokaryotic type
DNA Topoisomerases
NIES25_20990
DNA repair and recombination proteins [BR:
nlk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NIES25_20990
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
DUF6429
Motif
Other DBs
NCBI-ProteinID:
BAY75652
LinkDB
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Position
2476782..2479448
Genome browser
AA seq
888 aa
AA seq
DB search
MSTLVIVESPTKARTIRNYLPSGYKVEASMGHVRDLPQSATEIPPAVKGEKWAQLGVNVD
ADFEPVYVVPKDKKKIVTQLKDALKDVDELILATDEDREGESISWHLYQLLKPKVPTKRM
VFHEITQDAIKKALKNCRNIDEQLVRAQETRRILDRLVGYTLSPLLWKKIAWGLSAGRVQ
SVAVRLLVNKERQRRAFHEGTYWDLKASLEKDKTPFAAQLVTLGKTKIANGGDFDPATGQ
IVAGRNVLLLNEEQALALKERLTGKTWNVTDIEERPVTRKPAPPFTTSTLQQESNRKLRL
SARDTMRIAQNLYEQGYITYMRTDSVHLSDQAIAAARSCVEKLYGQQYLSPQPRQYTTKS
KGAQEAHEAIRPAGSTFRTPQETGLGGRELAVYDLIWKRTVACQMADSRQTQISVQLQVE
DAGFRSSGKRIEFPGYLRAYVEGSDDPEAALEDQEVILPSLKVGDRPNCTELQAIGHETQ
PPARYTEATLVKTLESEGIGRPSTYASIIGTIIDKGYAQLVSNALIPTFTAFAVTDLLEK
HFPDIVDPSFTSKMEQTLDDIATGEAKWLPYLQQFYLGDKGLETLVKEQESQIDATKART
VELENLEAKVRIGKYGPYIEVENGNGVVTASIPKDLTPADLDPKQVEVLLRQKTTGPDQV
GRHPETGEPIYVKIGAYGPYVQLGDKSEENPKPKQASLPKGVTPENVTLEMAVGLLALPR
TLGTHPVTGSKIQASLGRFGPYIVHDQGKEGKDYRSLKAADNVLTITLERALELLSEPKK
GRSSTNSKSKAALRELGTHPEDDEPVNIYDGPYGPYIKHGKTNASIPEGQSVEEITLATA
LELLAAKASTGKSTRKTTKSTTSKSKSTGSKSTAKSSTTATKKKAAEG
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactctcgtcatcgtcgaatctccaaccaaagctcgtaccattcgcaactacttg
ccatcaggctataaggtagaggcgtctatgggtcatgtgcgtgacttaccgcagtcggct
actgaaattcccccagccgtcaaaggagaaaaatgggcgcagctaggggtaaatgtggac
gccgactttgaaccggtatatgttgtcccgaaagacaaaaagaaaattgtcacccagctc
aaagatgccctcaaagatgtagatgaactcattctggcaacggacgaagaccgggaaggt
gaaagcattagttggcatttataccaactgctgaagccgaaagtcccaactaagcggatg
gtgtttcacgaaattacccaagatgccatcaaaaaagcgctgaagaactgccgtaatatc
gatgaacagttggttcgcgcccaagaaacgcggcggattttagaccgattggtgggttat
actttatctccgctgctatggaaaaaaatcgcctggggattatctgctgggcgggtgcag
tctgtagcggtacgacttttagtcaacaaggaacgccaacgccgcgctttccatgaaggt
acgtactgggatttaaaggctagtttagaaaaggacaaaacgccgtttgccgcccagtta
gtgacgctgggaaaaaccaaaatagccaatggcggcgattttgaccccgcaaccggacaa
attgtcgcaggccgcaatgtcttgttgctcaatgaagaacaagccttagccctcaaggaa
cgcctgactggaaaaacttggaatgtcaccgacattgaagaacgtccagtgacgcgcaaa
cccgcgccaccgtttactacctcgacgctgcaacaagaatctaaccggaaactgcggctc
tcagcccgcgatacgatgcgaattgcccagaatttgtacgaacaggggtatattacctat
atgcggacagattcggtacatttgtcagatcaagcgatcgcagctgctagaagttgtgta
gaaaaactctacggtcagcaatatctcagtccccagccccggcaatacaccaccaaatcc
aaaggcgcacaagaagcgcacgaagcaattcgtccagcaggtagcaccttccgcaccccc
caagaaaccggtttgggcggtcgggaacttgctgtctacgatttgatttggaagcgtact
gtggcttgccagatggccgactctcgacaaacccaaatttccgtacaattgcaagtcgaa
gacgctggttttcgttcttctggcaagcggattgaatttccgggatatttacgcgcttac
gttgaaggttcagatgacccagaagcagcgctggaagaccaagaagtaattttacctagt
ctgaaagtaggcgatcgccccaattgtaccgaactccaagcaattggtcacgaaacccaa
ccccctgctaggtacaccgaagcaactttagtcaaaaccttagaaagcgaaggtatcggt
cgtcccagtacctacgccagcattattggcaccatcatcgacaagggttacgcccaattg
gtgagtaacgccctcatacccactttcactgctttcgccgtcaccgacttgctggaaaaa
catttccccgatatcgtcgatcccagctttacctcaaaaatggagcaaaccctcgacgac
atagccacaggtgaagctaaatggctaccttacctccagcaattctatttgggagacaaa
ggtttggaaaccctagtcaaggaacaggaaagccaaattgatgccaccaaagccagaact
gtagaactggaaaatttggaagccaaagtccgtattgggaaatacggcccctacattgaa
gttgaaaatggtaacggtgttgtcactgcctcaattcctaaagacttgacaccagctgac
ctagaccccaagcaggtagaagtattactgcggcaaaaaaccacaggtcccgaccaggta
ggacgccatcccgaaactggcgaaccaatttatgtgaaaattggtgcctatgggccttat
gtccaattaggtgacaagtccgaagaaaaccccaaaccgaaacaagcctctctacccaaa
ggagtcactccagaaaacgttaccctggaaatggctgttggtctgttggcgctaccccgg
acgttaggaactcatccagtcactggcagcaaaatccaagcaagtttgggacgctttggc
ccctatatcgttcacgaccagggtaaagaaggaaaagattatcgctccctaaaagctgct
gataatgtattgacaattactctagaacgtgcgttggaattgttgtcagagccaaaaaag
ggacgcagttccaccaacagcaagtccaaggcagctttacgcgaattgggtacgcatcca
gaagacgacgaaccagtaaatatctacgatggcccttatggcccttacatcaagcatggt
aaaactaatgccagtatcccagagggccaatcggtagaagagataacgctggctacggcc
ttggaattgttggcagctaaagcttccacaggaaaatccactcgcaaaaccactaaatca
acaacttccaaatctaagtcaactggctctaagtcaactgcgaagtcatcgacgacagcg
acgaagaaaaaagcggcagaaggttag
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