Nostoc linckia: NIES25_24420
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Entry
NIES25_24420 CDS
T10227
Name
(GenBank) DSH domain-containing protein
Organism
nlk Nostoc linckia
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Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
Ski2_cyano_M
DEAD
ResIII
Helicase_C
DEXQc_Suv3
nSTAND3
AAA_22
ATPase_2
nSTAND_NTPase5
MTR4-like_stalk
DUF3516
Motif
Other DBs
NCBI-ProteinID:
BAY75993
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Position
complement(2895646..2898318)
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AA seq
890 aa
AA seq
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MNYPAPSPELDLRSIFPFELDRFQKDAIASLNAGRSVVVCAPTGSGKTLVGEYAIYRALS
RGKRVFYTTPLKALSNQKLRDFREKFGLDMVGLLTGDASINRDAPILVMTTEIFRNMLYG
TPIGQVGISLVDVDAVVLDECHYMNDRQRGTVWEESIIYCPREVQLAALSATVANSDQLT
DWLNRVHGPTDLIYSDFRPVPLEFHFCNAKGLFPLLNDSKTKINPRLANRGKRRQGDRTK
AGRPEAPGIIYTLNHLQQRDMLPAIYFIFSRRGCDKAVAEVGDLWLVNNEESQILREQID
EFLNRNPEAGRSGQIAPLYRGIAAHHAGILPAWKALVEELFQQGLIKVVFATETLAAGIN
MPARTTVISTLSKRTDTGHRLLNASEFLQMAGRAGRRGMDKQGHVVSVQTPFEGAKEAAY
LATSKPDPLVSQFTPSYGMVLNLLQTHTLEQARELIERSFGQYMATLHLRPEYDEIAELQ
GQLAQLQEQIAAVDENELAVYEKLRQRLKVERQILKTLQEQALLDRQEQLAMMLGFAVSG
TLLSLKGKNIPVSTPVTAVLVGKTPGSGDAPYLVCLGHDNRWYVATTADVVDLYAELPRV
EVPAEVLPPTEMPLRPGQPVLSGQETFAIATQIPNPVESLYMAPEVAEQLSRVTAIQEQI
EAHPVHQSGNAGTIFKRRARYVELEAELEELQGVVEQQSQRHWEEFLNLIAILQHFGALD
NLVPTQLGQIAAAIRGENELWLGLVFASGELDNLDPHHLAAAAAALVTETPRPDSKVNFD
LSNEVTEALAKLRGIRRQMFQLQRRYNVALPIWLEFELIALVEQWALGMEWTELCNNTSL
DEGDVVRILRRTLDLLSQIPHVPNLPNSFQRNAYRAMQLIDRFPVNEVIE
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
gtgaattatcccgcgccatctcctgaacttgacctgaggtcgatatttccctttgaactg
gatcggttccagaaagatgcgatcgcatcccttaacgctggacgttccgtagttgtatgt
gcgcctacaggttcgggcaaaacattagtaggggaatacgctatttatcgcgccttgtcg
cgaggaaaacgtgtgttttacactactcccctgaaggcgctgtcgaatcaaaaattacgt
gattttcgagaaaaattcgggttagatatggtgggactgttaactggagatgcttccatt
aacagggatgcacccattttagtgatgaccacagaaattttccgaaatatgctttatggt
acgcccattgggcaagttggaatttcgttagtggacgttgacgcagtggtgctagatgag
tgccactacatgaacgatcgccaacgcggtacagtttgggaagaatcaatcatctactgt
ccccgtgaagttcaactggcagccctttccgcaacggtagccaatagcgatcaactcacc
gattggctcaatcgcgtccacgggccaacagacctgatttactcggattttcgcccagta
cctttggaattccacttttgtaatgccaaaggcttgtttccgctgttgaatgacagcaaa
accaaaattaacccccgtctggctaatcgaggcaaaagaagacaaggcgatcgcacaaaa
gctggtagaccagaggctcctggtataatttatacgttgaaccacttgcagcaacgagat
atgctaccagccatttactttatcttcagccgtcggggatgtgataaagcagtggcagaa
gtgggcgatttatggctggtaaataatgaagagtcccaaattttacgggaacaaattgat
gagtttttaaaccgcaatcctgaggcaggacgttctggacaaattgctcccctgtaccga
ggaattgccgcccaccacgccggaattctacctgcatggaaagcactggtagaagaacta
tttcagcaggggctgattaaggtggtattcgccaccgagacactggcagcgggaattaat
atgcccgcccgaacaacggtaatttccaccctttccaagcgtactgatactggacaccgc
ctgttaaacgcttccgaatttctgcaaatggcgggacgggcaggccgccggggaatggat
aaacaagggcatgtggtgagcgtacaaactccctttgaaggagccaaagaagctgcgtat
ttggccacatccaagccagatccgctagtcagccagtttacgccgagttatggtatggta
ctcaacttgctgcaaacccataccttagagcaagccagggaactgatagaacgcagtttt
gggcagtacatggcgactttgcatttaaggcctgaatatgatgaaattgcggaattgcaa
gggcaattagcccaattgcaggaacaaatcgccgctgttgatgaaaatgaactggctgtt
tatgagaaattgcggcaacggttaaaagtagaacgccagatattgaaaaccctgcaagaa
caagcgcttttagatagacaagaacaattggcgatgatgttgggctttgcagtgtcagga
actctgttgagtctcaaaggtaaaaatatcccagtgtctacacctgtaaccgcagtgtta
gtgggaaaaacgcctggttctggtgacgctccttacttggtatgcttgggacacgataac
cgttggtacgtggcaactacagcagatgtagtcgatttgtatgccgaactgccgcgagtt
gaagtgccagcagaagtgctaccaccaacagaaatgccgttgaggccgggacagccagtt
cttagcggtcaagaaacatttgcgatcgccacccaaatccccaatccggtagagtctttg
tatatggcaccagaggtagccgaacaactcagtcgcgttaccgccatccaagagcaaata
gaagctcatcccgtacatcaatcaggcaatgccggaacgattttcaaacgccgggcccgc
tatgtcgaactagaagccgaactcgaagagttgcaaggtgtagtagagcaacagtcgcaa
cgtcattgggaagagtttctcaatttaattgcaattctccaacactttggcgcattggat
aacctagtacccacacaactagggcaaattgctgctgccattcgtggggaaaatgaattg
tggctgggtttagtattcgctagcggcgaactggacaacttagatccgcaccatttagca
gcggcggcggcggctttggtgacagaaactccacgtccagatagtaaggttaactttgac
ctcagtaatgaagtcacagaagccttagcaaaattgcggggaattcgtcgtcaaatgttt
caactgcaacgacgttataacgtagcattacctatatggttggagtttgaattaattgcc
cttgtggagcaatgggcgctaggtatggagtggacagaactgtgtaacaacaccagtttg
gatgaaggtgacgtggtgagaattttacggcggacgttagatttattatcgcagataccc
cacgttcccaatttaccaaactctttccagcgtaatgcttatcgagcaatgcaattgatt
gatagattccctgtgaatgaagtgattgagtga
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