Nostoc linckia: NIES25_25310
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Entry
NIES25_25310 CDS
T10227
Name
(GenBank) cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
nlk Nostoc linckia
Pathway
nlk02010
ABC transporters
nlk03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
nlk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NIES25_25310
03070 Bacterial secretion system
NIES25_25310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nlk02000
]
NIES25_25310
02044 Secretion system [BR:
nlk02044
]
NIES25_25310
Transporters [BR:
nlk02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NIES25_25310
Secretion system [BR:
nlk02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NIES25_25310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
cNMP_binding
SMC_N
Peptidase_C39
AAA_22
DUF87
ABC_ATPase
AAA_16
AAA_30
AAA_23
AAA_29
KAP_NTPase
nSTAND3
RsgA_GTPase
tify
DUF3987
Motif
Other DBs
NCBI-ProteinID:
BAY76082
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All DBs
Position
3024681..3027689
Genome browser
AA seq
1002 aa
AA seq
DB search
MTYIKNTFPEFLTTIEGFDRLPDEAIANVSQQLQAWRYRLGQKIIGKESPPQQITIIYEG
QVRLLGYEPQTQIPTTLKLLQPGEIIGEIGLLREIPCETAIASTEVVGLTLSAAVYFQLL
ESYPAFAEARKNRSNLVEVFDILGAYWQKQAIATLNLKELTQTALQDAAIQYVNPGKTSF
TQLDSGRVWFFSGGGTVSNFAAGDRLEPEDDRDKIHVSGQTPARLLGLNPSTLILQDTRQ
LELAVSDTQPPSQEELDIPYASDEIVLSQTTGQASNNSGKRIKYPFFGGKGELNSTFACF
QMLAKHLEMPFRREVVRRILNEQIKRQGNISFPALAYLSELIGLKAQLVDLPVASVTRIP
TPALIRYGDNFAVLYETDANTIVVGVPSQGIVRCKPAQFVEQLDTDPNNFPPQVRVLLLS
ATKETPQERFGLRWFLPYLSRYRRVLIEVFIASFFVQLAALANPLVVQLIIDKVITQNSI
GTLHILGLLLLVVGLFEAVLTTLRTYLFVDTTNRIDMGLGSQIIDHLLRLPLRYFERRPV
GELSTRINELENIRQFLTGTALTVGLDALFSLVYIGVMLIYSWQLTLVGLSTIPVFVVIT
LVASPTISRQLRSKAERNSETQSYLVEVMSGIQTVKAQNIELRSRFSWQERYARYVSAGF
KTVVTSTLANSTSNFLNKLSSLLVLWVGAYLVLQQQLTLGELIAFRIISGYVTSPILRLA
QLWQSFQETALSIERLSDIVDTPEEAETDRYNIPLPAITGAVKYENVSFRFGTTGPLQLS
NVNLEFPPGKFVGIVGQSGSGKSTMMKLLLRLYETESGRILIDGYDIAKVELYSLRRQIG
VVPQETLLFDGTVQENIALTNPDATTEEIIQAAQVACAHEFIMNLPNGYNTRVGERGSAL
SGGQRQRIAIARSVLQRPKLLVLDEATSALDYPTERQICLNLARAFKGNTVFFITHRLNT
VSNADIIVVMDNSRVIEKGSHQELMAAKGHYYYLYHQQEVNL
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgacttatattaagaacacttttccagaatttctcacaaccatagaggggttcgatcgc
ctaccagatgaagcgatcgccaacgtatcccaacagctgcaagcttggcggtatcggttg
ggtcaaaaaatcatcggtaaagaaagtccgccgcaacagataacaatcatttatgaagga
caggtgcggctgttgggatacgaaccccagacgcaaatcccaaccaccttgaaattactg
caaccaggggaaatcatcggcgaaattggtttattgcgcgagattccttgtgaaacagcc
atcgcctccaccgaggtagtgggtttaaccttgagtgcggcagtatattttcagctatta
gagtcatacccagcatttgccgaagctcggaaaaaccgcagtaacttagtagaagtattc
gatattctcggtgcttattggcaaaagcaagcgatcgccacattaaacctgaaagaactc
acacaaacagctttacaagatgcggcaattcagtacgtaaatcctgggaaaacttcattc
acccaactcgatagcggacgcgtttggttttttagtggtgggggtaccgtcagcaatttt
gctgctggcgatcggttagaaccagaagacgatcgagacaagatccacgttagcggccaa
actcccgcacgcttactcggtctaaatccctcaactttgatattgcaagatactcgtcag
ctagaacttgcagtcagtgacacccaaccaccaagccaagaagaactagatattccctac
gcatcagacgaaatagttctatcacaaacaaccggtcaggcctcgaataattcaggaaaa
cgcataaaatacccattttttggcggcaaaggagaattaaattcaaccttcgcctgcttc
caaatgctggcgaaacacttagaaatgccgtttcgtcgggaagtggttcgccgcatttta
aacgagcaaatcaaacgccagggtaatatttcctttccagctcttgcttacctatcagag
ttaattggactcaaagcgcaacttgtagatctgccagtagcctcagtcactcggattccc
acacctgcattaattcgctacggtgataattttgctgttttgtatgaaaccgacgccaat
acaatagttgtgggcgtaccatcccaaggaattgtccgctgcaaaccggctcaatttgtc
gaacaattagatacagatccgaataacttcccgccacaagttagagtattactgctctcg
gctaccaaagaaacaccacaagagcgttttggtctgcggtggtttttaccttatttgtca
cgctatcgccgagtattgatagaagtatttatcgcttcctttttcgtgcagttagcagca
ttggcaaatcccttggtagtgcagttaattatcgacaaagtaattacccaaaatagtatt
ggtactttacatattttagggctattactattagtagtcgggctatttgaggcggtgtta
actaccttgcgaacctacttatttgtcgatactacaaatcgtatcgatatgggtttaggg
tcgcaaattatcgaccacttattacgtctaccactgcgctattttgaacggcgaccagtg
ggcgaactttctactcggattaacgagctagaaaatattcgccagtttctcaccggtact
gctttaacagtagggttagatgctctattttccctcgtttatatcggtgtgatgctgatt
tatagttggcaactcaccttggtaggtttaagcacaattcccgtatttgtggttattacc
ttagtggcgtctcctactattagcagacaattacgctctaaagccgaacgcaactccgaa
actcaatcttatttagtggaggtgatgtcaggaattcaaacagtaaaagcgcagaatatc
gaattgcgatcgcgcttttcctggcaagagcgttatgctcgttatgtgtccgctggtttt
aaaacagttgtcacttctaccctcgccaactccacaagtaactttctcaacaaactcagc
agcttactagttttatgggtaggagcttatttagtactgcaacaacaattaactttaggt
gaattaatcgccttcagaattatctctggttacgttaccagcccaatattgcgtttagct
caactttggcaaagcttccaagaaactgccttgtccatagaacgtttgagcgatattgtt
gatacaccagaagaagcagaaacagaccgctacaatatacccttaccggcaattaccgga
gcagtcaaatacgagaacgtttccttccgatttggtaccactggccctctacaactttct
aacgtcaacctcgaatttcctcccggaaaatttgttggcattgtcggacaaagtggttct
ggtaaaagtaccatgatgaaattattgctgagactttatgaaaccgaatccggcagaatt
ttgattgatggttacgatattgccaaagtagaactttattcactgcgacgacaaattggt
gtagttcctcaagaaacattgttatttgatggcaccgttcaagaaaatattgccctcaca
aaccccgatgcaacaaccgaagaaattattcaagcggctcaggtagcctgtgcccacgaa
tttatcatgaacttgcccaacggttacaacacgcgggtgggagaacggggttctgcactt
tctgggggacaacgacaaagaattgcgatcgcgcgttctgttttacaacgaccaaaatta
ctagttttagatgaagcaactagcgccttggattatcccacagagcgacaaatctgtctc
aacttagctagagcattcaaaggtaatacagtattttttattacccaccgactgaatacc
gttagtaatgcagacatcatcgttgtcatggataacagcagggttatagaaaaaggtagc
catcaagaattaatggctgctaaaggtcattattactacttgtatcatcaacaagaagta
aacttatga
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