Nostoc linckia: NIES25_26880
Help
Entry
NIES25_26880 CDS
T10227
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
nlk Nostoc linckia
Pathway
nlk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nlk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NIES25_26880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlk03019
]
NIES25_26880
03110 Chaperones and folding catalysts [BR:
nlk03110
]
NIES25_26880
03029 Mitochondrial biogenesis [BR:
nlk03029
]
NIES25_26880
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nlk04147
]
NIES25_26880
Enzymes [BR:
nlk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
NIES25_26880
Messenger RNA biogenesis [BR:
nlk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
NIES25_26880
Chaperones and folding catalysts [BR:
nlk03110
]
Heat shock proteins
HSP60 / Chaperonin
NIES25_26880
Mitochondrial biogenesis [BR:
nlk03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
NIES25_26880
Exosome [BR:
nlk04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NIES25_26880
Exosomal proteins of other body fluids (saliva and urine)
NIES25_26880
Exosomal proteins of breast cancer cells
NIES25_26880
Exosomal proteins of colorectal cancer cells
NIES25_26880
Exosomal proteins of bladder cancer cells
NIES25_26880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
GTP_EFTU_D4
Motif
Other DBs
NCBI-ProteinID:
BAY76239
LinkDB
All DBs
Position
3193004..3194638
Genome browser
AA seq
544 aa
AA seq
DB search
MAKRIIYNENARRALERGIDILAEAVAVTLGPKGRNVVLEKKFGAPQIVNDGVTIAKEIE
LEDHIENTGVALIRQAASKTNDAAGDGTTTATVLAHAIVKEGLRNVAAGANAILLKRGID
KATAFLVDKIAEHARPVEDSKAIAQVGAISAGNDEEVGQMIAQAMDKVGKEGVISLEEGK
SMTTELEITEGMRFDKGYISPYFATDPERMEAVFDEPFLLLTDKKIALVQDLVPVLEQVA
RAGRPLVIIAEDIEKEALATLVVNRLRGVLNVAAVKAPGFGDRRKAMLEDIAVLTGGQLV
TEDAGLKLDNTKLDSLGKARRITITKDNTTIVAEGNDVAVKARVEQIRRQIEETESSYDK
EKLQERLAKLSGGVAVVKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHL
APELETWANSNLTGEELIGALIVARALPAPLKRIAENAGQNGAVIAERVKEKEFSVGYNA
ATNEFVDLLSAGIVDPAKVTRSALQNAASIAGMVLTTECIVVDKPEPKDGAPAAGAGAGG
DFDY
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcgcattatctacaacgaaaacgcccgtcgcgcccttgagcgaggcattgat
atcctggctgaggctgtagctgttacccttggccccaaaggtcggaacgttgtcctagaa
aagaaatttggcgcaccgcaaatcgttaatgacggtgtaaccatcgccaaagaaatcgaa
ttagaagaccacattgaaaacaccggtgtagctctgattcgtcaagctgcttctaagacc
aacgatgctgcgggcgatggcaccaccactgccaccgttttagctcatgcgattgtcaaa
gaaggcttgcgtaacgttgccgctggtgctaatgcgattttgttgaagcgtggtattgac
aaagctaccgccttcctcgtagataaaattgctgaacatgcccgtccagtggaagattcc
aaagctattgcccaagttggtgcaatctcggctggtaacgacgaagaagtcggccaaatg
attgcccaagctatggacaaggtgggcaaggaaggcgtaatttccctagaagaagggaaa
tctatgactaccgagttggaaattactgaagggatgcgctttgataaaggctacatctct
ccttattttgccaccgaccccgaacggatggaagcggttttcgatgagcctttcctcctg
ttgaccgataagaaaattgccttggtacaagacctcgtaccagtgttagagcaagtagct
cgtgctggtcgtcctttggtgattattgctgaagatatcgaaaaagaagctttggcaacc
ttggtagttaaccgtttgcgcggtgtactgaatgttgctgctgtcaaggctcctggcttt
ggcgatcgccgcaaagctatgctagaagatatcgcagttttgactggcggtcaattagtc
accgaagatgctggtttgaagctagataacaccaagttagatagcctgggtaaagctcgc
cgcatcaccatcactaaggacaacaccacaattgttgccgaaggtaacgatgttgcagtt
aaagctcgtgtagaacaaattcgtcgtcaaatcgaagaaaccgaatcttcctacgacaaa
gaaaaacttcaagagcgtcttgctaaactttctggcggtgtcgctgtggtgaaagtgggt
gcagccactgaaaccgaaatgaaagacaagaaactccgcttagaagatgctatcaacgct
actaaagctgctgtggaagaaggtattgttcctggcggtggtacaaccctagctcacctc
gctcctgagttagaaacttgggcgaacagcaacctcactggtgaagagttgattggtgcg
ttgattgtggctcgtgctttacctgcgcctttgaagagaattgcggaaaacgctggtcaa
aatggtgctgtaattgctgagcgggtcaaagagaaggaattcagcgttggttacaatgct
gcaactaacgaatttgtagatttgttaagtgctggtattgttgaccctgcgaaagtaact
cgttctgctctgcaaaatgctgcttccatcgctggtatggtgttgacaaccgaatgtatt
gtagttgacaagcctgaacctaaagacggcgctcctgctgctggtgctggtgctggtggc
gacttcgattactaa
DBGET
integrated database retrieval system
